RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 PRO0255Q9UI72 69 aa12.09□□□□□ -0.47
CLIP4-201ENST00000320081 TMEM89A2RUT3 159 aa12.08□□□□□ -0.47
CLIP4-201ENST00000320081 GHRHP01286 108 aa12.08□□□□□ -0.47
CLIP4-201ENST00000320081 TMEM126AQ9H061 195 aa12.08□□□□□ -0.47
CLIP4-201ENST00000320081 TRBV10-2A0A0K0K1G8 114 aa12.08□□□□□ -0.48
CLIP4-201ENST00000320081 RNF183Q96D59 192 aa12.08□□□□□ -0.48
CLIP4-201ENST00000320081 DSCR8Q96T75 97 aa12.08□□□□□ -0.48
CLIP4-201ENST00000320081 CNFNQ9BYD5 112 aa12.08□□□□□ -0.48
CLIP4-201ENST00000320081 ORMDL1Q9P0S3 153 aa12.08□□□□□ -0.48
CLIP4-201ENST00000320081 SMIM20Q8N5G0 67 aa12.08□□□□□ -0.48
CLIP4-201ENST00000320081 BBC3Q96PG8 261 aaPredicted RBP12.08□□□□□ -0.48
CLIP4-201ENST00000320081 POM121L12Q8N7R1 296 aa12.07□□□□□ -0.48
CLIP4-201ENST00000320081 ASH1LQ9NR48 2969 aaKnown RBP12.07□□□□□ -0.48
CLIP4-201ENST00000320081 TSPEAR-AS2P59090 65 aa12.07□□□□□ -0.48
CLIP4-201ENST00000320081 FLNCQ14315 2725 aa12.06□□□□□ -0.48
CLIP4-201ENST00000320081 ODF3L2Q3SX64 289 aa12.06□□□□□ -0.48
CLIP4-201ENST00000320081 TRBV10-1A0A0K0K1A3 114 aa12.06□□□□□ -0.48
CLIP4-201ENST00000320081 F8WEM9 126 aa12.05□□□□□ -0.48
CLIP4-201ENST00000320081 LINC00308Q8TCZ7 52 aa12.05□□□□□ -0.48
CLIP4-201ENST00000320081 NOTCH1P46531 2555 aa12.04□□□□□ -0.48
CLIP4-201ENST00000320081 IGIPA6NJ69 53 aa12.04□□□□□ -0.48
CLIP4-201ENST00000320081 UBR5O95071 2799 aaPredicted RBP12.04□□□□□ -0.48
CLIP4-201ENST00000320081 PSMG3-AS1Q96PY0 264 aa12.03□□□□□ -0.48
CLIP4-201ENST00000320081 Q9UF83 564 aa12.03□□□□□ -0.48
CLIP4-201ENST00000320081 hADV29S1A0JD25 119 aa12.03□□□□□ -0.48
CLIP4-201ENST00000320081 C9orf85Q96MD7 179 aa12.03□□□□□ -0.48
CLIP4-201ENST00000320081 Q6ZSN1 163 aa12.02□□□□□ -0.49
CLIP4-201ENST00000320081 NBEAL2Q6ZNJ1 2754 aa12.01□□□□□ -0.49
CLIP4-201ENST00000320081 STAB1Q9NY15 2570 aa12.01□□□□□ -0.49
CLIP4-201ENST00000320081 LINC00694P0DN24 101 aa12.01□□□□□ -0.49
CLIP4-201ENST00000320081 TRACP01848 142 aa12.01□□□□□ -0.49
CLIP4-201ENST00000320081 GCN1Q92616 2671 aaKnown RBP12.01□□□□□ -0.49
CLIP4-201ENST00000320081 UBE2BP63146 152 aa12.01□□□□□ -0.49
CLIP4-201ENST00000320081 ODF3Q96PU9 254 aa12.01□□□□□ -0.49
CLIP4-201ENST00000320081 ZMAT4Q9H898 229 aa12.01□□□□□ -0.49
CLIP4-201ENST00000320081 REG3AQ06141 175 aa12□□□□□ -0.49
CLIP4-201ENST00000320081 CHCHD10Q8WYQ3 142 aaPredicted RBP12□□□□□ -0.49
CLIP4-201ENST00000320081 TRBV6-8A0A0A6YYG3 113 aa11.99□□□□□ -0.49
CLIP4-201ENST00000320081 TRBV6-5A0A0K0K1A5 114 aa11.99□□□□□ -0.49
CLIP4-201ENST00000320081 A0A1B0GX51 115 aa11.99□□□□□ -0.49
CLIP4-201ENST00000320081 UBE2D4Q9Y2X8 147 aa11.99□□□□□ -0.49
CLIP4-201ENST00000320081 ITPR1Q14643 2758 aa11.99□□□□□ -0.49
CLIP4-201ENST00000320081 ASPMQ8IZT6 3477 aa11.99□□□□□ -0.49
CLIP4-201ENST00000320081 IGKV2-24A0A0C4DH68 120 aa11.98□□□□□ -0.49
CLIP4-201ENST00000320081 A0A0B4J2C4 111 aa11.97□□□□□ -0.49
CLIP4-201ENST00000320081 H0YGX0 51 aa11.97□□□□□ -0.49
CLIP4-201ENST00000320081 COL4A2P08572 1712 aa11.97□□□□□ -0.49
CLIP4-201ENST00000320081 IGLV4-69A0A075B6H9 119 aa11.97□□□□□ -0.49
CLIP4-201ENST00000320081 IGLV2-18A0A075B6J9 118 aa11.97□□□□□ -0.49
CLIP4-201ENST00000320081 H3BT86 120 aa11.97□□□□□ -0.49
CLIP4-201ENST00000320081 RPL32P62910 135 aaKnown RBP11.97□□□□□ -0.49
CLIP4-201ENST00000320081 OXLD1Q5BKU9 147 aa11.97□□□□□ -0.49
CLIP4-201ENST00000320081 SDIM1Q6ZPB5 146 aa11.97□□□□□ -0.49
CLIP4-201ENST00000320081 SPANXCQ9NY87 97 aa11.97□□□□□ -0.49
CLIP4-201ENST00000320081 SCXQ7RTU7 201 aa11.96□□□□□ -0.49
CLIP4-201ENST00000320081 LRBAP50851 2863 aa11.96□□□□□ -0.49
CLIP4-201ENST00000320081 A0A096LNI7 61 aa11.96□□□□□ -0.49
CLIP4-201ENST00000320081 XGP55808 180 aa11.96□□□□□ -0.49
CLIP4-201ENST00000320081 LY6G6DO95868 133 aa11.95□□□□□ -0.5
CLIP4-201ENST00000320081 ADAMTSL4-AS1Q5T5F5 129 aa11.95□□□□□ -0.5
CLIP4-201ENST00000320081 NDUFA1O15239 70 aa11.95□□□□□ -0.5
CLIP4-201ENST00000320081 COX6A2Q02221 97 aa11.95□□□□□ -0.5
CLIP4-201ENST00000320081 PRR3P79522 188 aaKnown RBP11.94□□□□□ -0.5
CLIP4-201ENST00000320081 LINC00242Q5T6M2 205 aa11.94□□□□□ -0.5
CLIP4-201ENST00000320081 C6orf99Q4VX62 202 aa11.93□□□□□ -0.5
CLIP4-201ENST00000320081 ETDCA0A1B0GVM5 59 aa11.93□□□□□ -0.5
CLIP4-201ENST00000320081 C9orf116Q5BN46 136 aaPredicted RBP11.93□□□□□ -0.5
CLIP4-201ENST00000320081 C1orf158Q8N1D5 194 aa11.93□□□□□ -0.5
CLIP4-201ENST00000320081 TRAV23DV6A0A075B6W5 121 aa11.92□□□□□ -0.5
CLIP4-201ENST00000320081 IGLV4-60A0A075B6I1 120 aa11.92□□□□□ -0.5
CLIP4-201ENST00000320081 DMXL1Q9Y485 3027 aa11.92□□□□□ -0.5
CLIP4-201ENST00000320081 SPATA25Q9BR10 227 aa11.91□□□□□ -0.5
CLIP4-201ENST00000320081 CCL18P55774 89 aa11.91□□□□□ -0.5
CLIP4-201ENST00000320081 UBE2D1P51668 147 aa11.91□□□□□ -0.5
CLIP4-201ENST00000320081 RBMY1FQ15415 496 aaKnown RBP11.91□□□□□ -0.5
CLIP4-201ENST00000320081 PYGO1Q9Y3Y4 419 aa11.9□□□□□ -0.5
CLIP4-201ENST00000320081 COL6A5A8TX70 2615 aa11.88□□□□□ -0.51
CLIP4-201ENST00000320081 LRRC75A-AS1Q8N1F1 130 aa11.88□□□□□ -0.51
CLIP4-201ENST00000320081 TRBV6-4A0A1B0GX49 114 aa11.88□□□□□ -0.51
CLIP4-201ENST00000320081 MRPS36P82909 103 aaKnown RBP11.88□□□□□ -0.51
CLIP4-201ENST00000320081 TIRAPP58753 221 aa11.87□□□□□ -0.51
CLIP4-201ENST00000320081 RBM3P98179 157 aaKnown RBP11.87□□□□□ -0.51
CLIP4-201ENST00000320081 CDC42SE2Q9NRR3 84 aa11.87□□□□□ -0.51
CLIP4-201ENST00000320081 UNC79Q9P2D8 2635 aa11.87□□□□□ -0.51
CLIP4-201ENST00000320081 COX8CQ7Z4L0 72 aa11.87□□□□□ -0.51
CLIP4-201ENST00000320081 RETNQ9HD89 108 aa11.87□□□□□ -0.51
CLIP4-201ENST00000320081 CITED1Q99966 193 aa11.86□□□□□ -0.51
CLIP4-201ENST00000320081 IGKV2-28A0A075B6P5 120 aa11.86□□□□□ -0.51
CLIP4-201ENST00000320081 TRBV30A0A0K0K1B3 111 aa11.86□□□□□ -0.51
CLIP4-201ENST00000320081 IGKV2D-28P01615 120 aa11.86□□□□□ -0.51
CLIP4-201ENST00000320081 DIRC1Q969H9 104 aa11.86□□□□□ -0.51
CLIP4-201ENST00000320081 LINC00959A0A1B0GUT2 108 aa11.86□□□□□ -0.51
CLIP4-201ENST00000320081 C11orf45Q8TAV5 145 aa11.86□□□□□ -0.51
CLIP4-201ENST00000320081 CHCHD7Q9BUK0 85 aa11.86□□□□□ -0.51
CLIP4-201ENST00000320081 DCHS1Q96JQ0 3298 aa11.86□□□□□ -0.51
CLIP4-201ENST00000320081 NDUFV3P56181 108 aaKnown RBP11.86□□□□□ -0.51
CLIP4-201ENST00000320081 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.85□□□□□ -0.51
CLIP4-201ENST00000320081 DEFB131BA0A096LNP1 70 aa11.85□□□□□ -0.51
CLIP4-201ENST00000320081 UBE2D3P61077 147 aa11.85□□□□□ -0.51
CLIP4-201ENST00000320081 UBE2D2P62837 147 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms