RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 DEFB113Q30KQ7 82 aa12.55□□□□□ -0.4
CHRNA5-201ENST00000299565 ATRQ13535 2644 aa12.55□□□□□ -0.4
CHRNA5-201ENST00000299565 IGLV10-54A0A075B6I4 117 aa12.55□□□□□ -0.4
CHRNA5-201ENST00000299565 LINC00242Q5T6M2 205 aa12.55□□□□□ -0.4
CHRNA5-201ENST00000299565 SND1-IT1Q9HBX3 110 aa12.54□□□□□ -0.4
CHRNA5-201ENST00000299565 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.53□□□□□ -0.4
CHRNA5-201ENST00000299565 NDUFV3P56181 108 aaKnown RBP12.52□□□□□ -0.4
CHRNA5-201ENST00000299565 C4orf3Q8WVX3 66 aa12.52□□□□□ -0.4
CHRNA5-201ENST00000299565 FLNBO75369 2602 aaKnown RBP12.52□□□□□ -0.4
CHRNA5-201ENST00000299565 DNAJC30Q96LL9 226 aa12.52□□□□□ -0.4
CHRNA5-201ENST00000299565 HELZ2Q9BYK8 2649 aaKnown RBP12.51□□□□□ -0.41
CHRNA5-201ENST00000299565 FAM236AA0A1B0GUQ0 79 aa12.5□□□□□ -0.41
CHRNA5-201ENST00000299565 FAM236BA0A1B0GV22 79 aa12.5□□□□□ -0.41
CHRNA5-201ENST00000299565 DNAJC9-AS1A6NH13 148 aa12.5□□□□□ -0.41
CHRNA5-201ENST00000299565 C1orf158Q8N1D5 194 aa12.5□□□□□ -0.41
CHRNA5-201ENST00000299565 CCDC179H3BU77 68 aa12.5□□□□□ -0.41
CHRNA5-201ENST00000299565 BRI3O95415 125 aa12.5□□□□□ -0.41
CHRNA5-201ENST00000299565 DAZ2Q13117 558 aaKnown RBP12.5□□□□□ -0.41
CHRNA5-201ENST00000299565 DAZ4Q86SG3 579 aaKnown RBP12.5□□□□□ -0.41
CHRNA5-201ENST00000299565 DAZ3Q9NR90 486 aaKnown RBP12.5□□□□□ -0.41
CHRNA5-201ENST00000299565 Q8N2B8 174 aa12.5□□□□□ -0.41
CHRNA5-201ENST00000299565 H3BT86 120 aa12.49□□□□□ -0.41
CHRNA5-201ENST00000299565 LST1O00453 97 aa12.49□□□□□ -0.41
CHRNA5-201ENST00000299565 NDUFA1O15239 70 aa12.49□□□□□ -0.41
CHRNA5-201ENST00000299565 SLPIP03973 132 aa12.48□□□□□ -0.41
CHRNA5-201ENST00000299565 SMIM20Q8N5G0 67 aa12.48□□□□□ -0.41
CHRNA5-201ENST00000299565 MALP21145 153 aa12.47□□□□□ -0.41
CHRNA5-201ENST00000299565 SPANXDQ9BXN6 97 aa12.47□□□□□ -0.41
CHRNA5-201ENST00000299565 SPANXCQ9NY87 97 aa12.47□□□□□ -0.41
CHRNA5-201ENST00000299565 SETXQ7Z333 2677 aaKnown RBP12.47□□□□□ -0.41
CHRNA5-201ENST00000299565 COX7B2Q8TF08 81 aa12.47□□□□□ -0.41
CHRNA5-201ENST00000299565 ITPR2Q14571 2701 aa12.46□□□□□ -0.41
CHRNA5-201ENST00000299565 SMIM1B2RUZ4 78 aa12.46□□□□□ -0.41
CHRNA5-201ENST00000299565 HIST1H4AP62805 103 aaKnown RBP12.46□□□□□ -0.41
CHRNA5-201ENST00000299565 C11orf72Q8NBR9 251 aa12.46□□□□□ -0.41
CHRNA5-201ENST00000299565 IGKV3D-7A0A0C4DH55 119 aa12.46□□□□□ -0.42
CHRNA5-201ENST00000299565 UBR5O95071 2799 aaPredicted RBP12.46□□□□□ -0.42
CHRNA5-201ENST00000299565 LECT2O14960 151 aa12.45□□□□□ -0.42
CHRNA5-201ENST00000299565 GYPEP15421 78 aa12.45□□□□□ -0.42
CHRNA5-201ENST00000299565 COX7A2LO14548 114 aa12.45□□□□□ -0.42
CHRNA5-201ENST00000299565 CFAP161Q6P656 301 aa12.45□□□□□ -0.42
CHRNA5-201ENST00000299565 BBC3Q96PG8 261 aaPredicted RBP12.45□□□□□ -0.42
CHRNA5-201ENST00000299565 LITAFQ99732 161 aa12.45□□□□□ -0.42
CHRNA5-201ENST00000299565 NTM-AS1Q6ZSK4 140 aa12.44□□□□□ -0.42
CHRNA5-201ENST00000299565 F8P00451 2351 aa12.44□□□□□ -0.42
CHRNA5-201ENST00000299565 TIRAPP58753 221 aa12.44□□□□□ -0.42
CHRNA5-201ENST00000299565 EDA2RQ9HAV5 297 aa12.44□□□□□ -0.42
CHRNA5-201ENST00000299565 C14orf132Q9NPU4 83 aa12.44□□□□□ -0.42
CHRNA5-201ENST00000299565 TMEM86BQ8N661 226 aa12.43□□□□□ -0.42
CHRNA5-201ENST00000299565 RNF152Q8N8N0 203 aa12.43□□□□□ -0.42
CHRNA5-201ENST00000299565 CDC42SE2Q9NRR3 84 aa12.43□□□□□ -0.42
CHRNA5-201ENST00000299565 IGLV4-60A0A075B6I1 120 aa12.42□□□□□ -0.42
CHRNA5-201ENST00000299565 SOSTDC1Q6X4U4 206 aa12.42□□□□□ -0.42
CHRNA5-201ENST00000299565 TRAV13-2A0A0B4J235 113 aa12.42□□□□□ -0.42
CHRNA5-201ENST00000299565 ANGP03950 147 aaKnown RBP12.42□□□□□ -0.42
CHRNA5-201ENST00000299565 TRBV10-1A0A0K0K1A3 114 aa12.41□□□□□ -0.42
CHRNA5-201ENST00000299565 C9orf153Q5TBE3 101 aa12.41□□□□□ -0.42
CHRNA5-201ENST00000299565 SS18Q15532 418 aa12.4□□□□□ -0.42
CHRNA5-201ENST00000299565 LINC00526Q96FQ7 95 aa12.4□□□□□ -0.42
CHRNA5-201ENST00000299565 HERV-K104P63124 156 aa12.39□□□□□ -0.43
CHRNA5-201ENST00000299565 S100A7L2Q5SY68 101 aa12.39□□□□□ -0.43
CHRNA5-201ENST00000299565 SBSPONQ8IVN8 264 aa12.38□□□□□ -0.43
CHRNA5-201ENST00000299565 C16orf74Q96GX8 76 aa12.38□□□□□ -0.43
CHRNA5-201ENST00000299565 PRR3P79522 188 aaKnown RBP12.38□□□□□ -0.43
CHRNA5-201ENST00000299565 LINC00482Q8N8I6 264 aa12.38□□□□□ -0.43
CHRNA5-201ENST00000299565 INAFM2P0DMQ5 153 aa12.37□□□□□ -0.43
CHRNA5-201ENST00000299565 F5H768 121 aa12.37□□□□□ -0.43
CHRNA5-201ENST00000299565 SDIM1Q6ZPB5 146 aa12.37□□□□□ -0.43
CHRNA5-201ENST00000299565 APCP25054 2843 aa12.36□□□□□ -0.43
CHRNA5-201ENST00000299565 LINC01006Q8NI28 216 aa12.36□□□□□ -0.43
CHRNA5-201ENST00000299565 FAM104AQ969W3 186 aa12.36□□□□□ -0.43
CHRNA5-201ENST00000299565 DEFB135Q30KP9 77 aa12.36□□□□□ -0.43
CHRNA5-201ENST00000299565 NCR3O14931 201 aa12.36□□□□□ -0.43
CHRNA5-201ENST00000299565 BEAN1Q3B7T3 259 aa12.35□□□□□ -0.43
CHRNA5-201ENST00000299565 TRBV6-8A0A0A6YYG3 113 aa12.34□□□□□ -0.43
CHRNA5-201ENST00000299565 SMIM11BQ8TCY0 68 aa12.34□□□□□ -0.43
CHRNA5-201ENST00000299565 UNC79Q9P2D8 2635 aa12.34□□□□□ -0.43
CHRNA5-201ENST00000299565 FAM218AQ96MZ4 157 aa12.34□□□□□ -0.43
CHRNA5-201ENST00000299565 SMR3AQ99954 134 aa12.34□□□□□ -0.43
CHRNA5-201ENST00000299565 TIMM17BO60830 172 aa12.33□□□□□ -0.44
CHRNA5-201ENST00000299565 CCL18P55774 89 aa12.33□□□□□ -0.44
CHRNA5-201ENST00000299565 LINC00269Q8N2A0 174 aa12.32□□□□□ -0.44
CHRNA5-201ENST00000299565 ZNF843Q8N446 348 aa12.32□□□□□ -0.44
CHRNA5-201ENST00000299565 LINC00337Q8N6G1 96 aa12.32□□□□□ -0.44
CHRNA5-201ENST00000299565 LAMTOR3Q9UHA4 124 aa12.32□□□□□ -0.44
CHRNA5-201ENST00000299565 TRAV25A0A0B4J276 109 aa12.31□□□□□ -0.44
CHRNA5-201ENST00000299565 A0A087WYN8 130 aa12.31□□□□□ -0.44
CHRNA5-201ENST00000299565 CITED1Q99966 193 aa12.31□□□□□ -0.44
CHRNA5-201ENST00000299565 TEP1Q99973 2627 aaKnown RBP12.31□□□□□ -0.44
CHRNA5-201ENST00000299565 C9orf116Q5BN46 136 aaPredicted RBP12.3□□□□□ -0.44
CHRNA5-201ENST00000299565 DAD1P61803 113 aa12.29□□□□□ -0.44
CHRNA5-201ENST00000299565 CMC4P56277 68 aaPredicted RBP12.29□□□□□ -0.44
CHRNA5-201ENST00000299565 IGLV5-39A0A0G2JS06 123 aa12.29□□□□□ -0.44
CHRNA5-201ENST00000299565 FAM222AQ5U5X8 452 aa12.28□□□□□ -0.44
CHRNA5-201ENST00000299565 MRPL23Q16540 153 aaKnown RBP12.27□□□□□ -0.45
CHRNA5-201ENST00000299565 NHLRC4P0CG21 123 aaPredicted RBP12.26□□□□□ -0.45
CHRNA5-201ENST00000299565 LINC00643Q86TS7 51 aa12.26□□□□□ -0.45
CHRNA5-201ENST00000299565 A0A096LNT2 108 aa12.26□□□□□ -0.45
CHRNA5-201ENST00000299565 TRBV6-4A0A1B0GX49 114 aa12.26□□□□□ -0.45
CHRNA5-201ENST00000299565 LINC00959A0A1B0GUT2 108 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms