RNA–Protein interactions for RNA: ENST00000262158.6

SMAD7-201, Transcript of SMAD family member 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD7, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-201ENST00000262158 DEFB130AP0DP74 79 aa13.65□□□□□ -0.22
SMAD7-201ENST00000262158 TOMM7Q9P0U1 55 aa13.65□□□□□ -0.22
SMAD7-201ENST00000262158 ATRQ13535 2644 aa13.64□□□□□ -0.23
SMAD7-201ENST00000262158 TRAV4A0A0B4J268 109 aa13.64□□□□□ -0.23
SMAD7-201ENST00000262158 SBSPONQ8IVN8 264 aa13.64□□□□□ -0.23
SMAD7-201ENST00000262158 ATP6V0E2Q8NHE4 81 aa13.64□□□□□ -0.23
SMAD7-201ENST00000262158 C3orf56Q8N813 242 aa13.64□□□□□ -0.23
SMAD7-201ENST00000262158 MEIG1Q5JSS6 88 aa13.63□□□□□ -0.23
SMAD7-201ENST00000262158 PRIMA1Q86XR5 153 aa13.63□□□□□ -0.23
SMAD7-201ENST00000262158 SPANXDQ9BXN6 97 aa13.63□□□□□ -0.23
SMAD7-201ENST00000262158 C11orf68Q9H3H3 251 aaKnown RBP13.63□□□□□ -0.23
SMAD7-201ENST00000262158 SPANXCQ9NY87 97 aa13.63□□□□□ -0.23
SMAD7-201ENST00000262158 IGLV4-60A0A075B6I1 120 aa13.62□□□□□ -0.23
SMAD7-201ENST00000262158 SNCGO76070 127 aa13.62□□□□□ -0.23
SMAD7-201ENST00000262158 ATXN8Q156A1 80 aa13.62□□□□□ -0.23
SMAD7-201ENST00000262158 CDC42SE2Q9NRR3 84 aa13.62□□□□□ -0.23
SMAD7-201ENST00000262158 C19orf73Q9NVV2 129 aa13.62□□□□□ -0.23
SMAD7-201ENST00000262158 TRGV4A0A0C4DH28 118 aa13.61□□□□□ -0.23
SMAD7-201ENST00000262158 DEFB4AO15263 64 aa13.61□□□□□ -0.23
SMAD7-201ENST00000262158 UBE2L6O14933 153 aa13.61□□□□□ -0.23
SMAD7-201ENST00000262158 LINC00308Q8TCZ7 52 aa13.61□□□□□ -0.23
SMAD7-201ENST00000262158 NDUFA1O15239 70 aa13.6□□□□□ -0.23
SMAD7-201ENST00000262158 KRTAP10-3P60369 221 aa13.6□□□□□ -0.23
SMAD7-201ENST00000262158 CLPSL2Q6UWE3 100 aa13.6□□□□□ -0.23
SMAD7-201ENST00000262158 H7C423 109 aa13.6□□□□□ -0.23
SMAD7-201ENST00000262158 GAGE2BQ13066 116 aa13.6□□□□□ -0.23
SMAD7-201ENST00000262158 GAGE2EQ4V326 116 aa13.6□□□□□ -0.23
SMAD7-201ENST00000262158 GAGE2DQ9UEU5 116 aa13.6□□□□□ -0.23
SMAD7-201ENST00000262158 TIRAPP58753 221 aa13.59□□□□□ -0.23
SMAD7-201ENST00000262158 IGLV5-45A0A087WSX0 123 aa13.59□□□□□ -0.23
SMAD7-201ENST00000262158 TRBV30A0A0K0K1B3 111 aa13.59□□□□□ -0.23
SMAD7-201ENST00000262158 TTC32Q5I0X7 151 aa13.59□□□□□ -0.23
SMAD7-201ENST00000262158 C2orf82Q6UX34 121 aa13.59□□□□□ -0.23
SMAD7-201ENST00000262158 TMEM86BQ8N661 226 aa13.59□□□□□ -0.23
SMAD7-201ENST00000262158 TRAV25A0A0B4J276 109 aa13.58□□□□□ -0.23
SMAD7-201ENST00000262158 HERVK_113P63121 156 aa13.58□□□□□ -0.23
SMAD7-201ENST00000262158 F5H768 121 aa13.58□□□□□ -0.24
SMAD7-201ENST00000262158 IGLV5-39A0A0G2JS06 123 aa13.57□□□□□ -0.24
SMAD7-201ENST00000262158 IGLV1-51P01701 117 aa13.57□□□□□ -0.24
SMAD7-201ENST00000262158 LINC00482Q8N8I6 264 aa13.57□□□□□ -0.24
SMAD7-201ENST00000262158 CCDC179H3BU77 68 aa13.57□□□□□ -0.24
SMAD7-201ENST00000262158 CSNK1G2-AS1Q8NCQ2 148 aa13.57□□□□□ -0.24
SMAD7-201ENST00000262158 TMEM243Q9BU79 118 aa13.57□□□□□ -0.24
SMAD7-201ENST00000262158 C5orf38Q86SI9 138 aa13.56□□□□□ -0.24
SMAD7-201ENST00000262158 CHCHD5Q9BSY4 110 aa13.56□□□□□ -0.24
SMAD7-201ENST00000262158 DAZ2Q13117 558 aaKnown RBP13.56□□□□□ -0.24
SMAD7-201ENST00000262158 DAZ4Q86SG3 579 aaKnown RBP13.56□□□□□ -0.24
SMAD7-201ENST00000262158 DAZ3Q9NR90 486 aaKnown RBP13.56□□□□□ -0.24
SMAD7-201ENST00000262158 TRBV10-2A0A0K0K1G8 114 aa13.54□□□□□ -0.24
SMAD7-201ENST00000262158 TRAV8-4A0A0B4J246 113 aa13.53□□□□□ -0.24
SMAD7-201ENST00000262158 TMEM262E9PQX1 116 aa13.53□□□□□ -0.24
SMAD7-201ENST00000262158 Q8N3U1 123 aa13.53□□□□□ -0.24
SMAD7-201ENST00000262158 C15orf53Q8NAA6 179 aa13.53□□□□□ -0.24
SMAD7-201ENST00000262158 TRBV10-1A0A0K0K1A3 114 aa13.53□□□□□ -0.24
SMAD7-201ENST00000262158 CIRBPQ14011 172 aaKnown RBP13.53□□□□□ -0.24
SMAD7-201ENST00000262158 RNASE1P07998 156 aaKnown RBP13.53□□□□□ -0.24
SMAD7-201ENST00000262158 FHL2Q14192 279 aa13.53□□□□□ -0.24
SMAD7-201ENST00000262158 C16orf74Q96GX8 76 aa13.53□□□□□ -0.24
SMAD7-201ENST00000262158 NHLRC4P0CG21 123 aaPredicted RBP13.51□□□□□ -0.25
SMAD7-201ENST00000262158 PFN2P35080 140 aa13.51□□□□□ -0.25
SMAD7-201ENST00000262158 COX6CP09669 75 aa13.5□□□□□ -0.25
SMAD7-201ENST00000262158 NDUFV3P56181 108 aaKnown RBP13.5□□□□□ -0.25
SMAD7-201ENST00000262158 UBE2WQ96B02 151 aa13.5□□□□□ -0.25
SMAD7-201ENST00000262158 LST1O00453 97 aa13.5□□□□□ -0.25
SMAD7-201ENST00000262158 MIR7-3HGQ8N6C7 128 aa13.5□□□□□ -0.25
SMAD7-201ENST00000262158 FAM218AQ96MZ4 157 aa13.5□□□□□ -0.25
SMAD7-201ENST00000262158 NSD1Q96L73 2696 aaPredicted RBP13.49□□□□□ -0.25
SMAD7-201ENST00000262158 TEP1Q99973 2627 aaKnown RBP13.49□□□□□ -0.25
SMAD7-201ENST00000262158 PF4P02776 101 aa13.48□□□□□ -0.25
SMAD7-201ENST00000262158 PKD1L1Q8TDX9 2849 aa13.48□□□□□ -0.25
SMAD7-201ENST00000262158 Q9HAA7 133 aa13.48□□□□□ -0.25
SMAD7-201ENST00000262158 IFITM1P13164 125 aa13.47□□□□□ -0.25
SMAD7-201ENST00000262158 XCL1P47992 114 aa13.47□□□□□ -0.25
SMAD7-201ENST00000262158 SMIM20Q8N5G0 67 aa13.47□□□□□ -0.25
SMAD7-201ENST00000262158 CITED1Q99966 193 aa13.47□□□□□ -0.25
SMAD7-201ENST00000262158 TRBV6-8A0A0A6YYG3 113 aa13.47□□□□□ -0.25
SMAD7-201ENST00000262158 HIVEP1P15822 2718 aa13.47□□□□□ -0.25
SMAD7-201ENST00000262158 TIMM17BO60830 172 aa13.46□□□□□ -0.25
SMAD7-201ENST00000262158 GYPEP15421 78 aa13.46□□□□□ -0.25
SMAD7-201ENST00000262158 LINC00158P58513 81 aa13.46□□□□□ -0.25
SMAD7-201ENST00000262158 CSDC2Q9Y534 153 aaKnown RBP13.46□□□□□ -0.25
SMAD7-201ENST00000262158 COX7B2Q8TF08 81 aa13.45□□□□□ -0.26
SMAD7-201ENST00000262158 LINC00337Q8N6G1 96 aa13.45□□□□□ -0.26
SMAD7-201ENST00000262158 TRBV6-4A0A1B0GX49 114 aa13.44□□□□□ -0.26
SMAD7-201ENST00000262158 C16orf95Q9H693 158 aa13.44□□□□□ -0.26
SMAD7-201ENST00000262158 IGLV10-54A0A075B6I4 117 aa13.43□□□□□ -0.26
SMAD7-201ENST00000262158 HILS1P60008 231 aa13.43□□□□□ -0.26
SMAD7-201ENST00000262158 DEFB135Q30KP9 77 aa13.42□□□□□ -0.26
SMAD7-201ENST00000262158 OVOL2Q9BRP0 275 aa13.42□□□□□ -0.26
SMAD7-201ENST00000262158 IGKV2-28A0A075B6P5 120 aa13.42□□□□□ -0.26
SMAD7-201ENST00000262158 IGKV2D-28P01615 120 aa13.42□□□□□ -0.26
SMAD7-201ENST00000262158 KMT2BQ9UMN6 2715 aaPredicted RBP13.41□□□□□ -0.26
SMAD7-201ENST00000262158 IGHV3OR16-9A0A0B4J2B5 98 aa13.4□□□□□ -0.26
SMAD7-201ENST00000262158 PRR3P79522 188 aaKnown RBP13.4□□□□□ -0.26
SMAD7-201ENST00000262158 ATP5G1P05496 136 aa13.4□□□□□ -0.26
SMAD7-201ENST00000262158 FAM19A3Q7Z5A8 133 aa13.39□□□□□ -0.27
SMAD7-201ENST00000262158 SND1-IT1Q9HBX3 110 aa13.39□□□□□ -0.27
SMAD7-201ENST00000262158 COX7A2LO14548 114 aa13.38□□□□□ -0.27
SMAD7-201ENST00000262158 FAM222AQ5U5X8 452 aa13.38□□□□□ -0.27
SMAD7-201ENST00000262158 X6R8D5 127 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms