RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 DNAH9Q9NYC9 4486 aa19.18■□□□□ 0.66
CCM2-201ENST00000258781 A0A1B0GUV1 79 aa19.18■□□□□ 0.66
CCM2-201ENST00000258781 ZFAND6Q6FIF0 208 aa19.18■□□□□ 0.66
CCM2-201ENST00000258781 NDUFA12Q9UI09 145 aa19.18■□□□□ 0.66
CCM2-201ENST00000258781 A0A096LPF7 62 aa19.18■□□□□ 0.66
CCM2-201ENST00000258781 MRPL23Q16540 153 aaKnown RBP19.18■□□□□ 0.66
CCM2-201ENST00000258781 SH2D6Q7Z4S9 175 aa19.18■□□□□ 0.66
CCM2-201ENST00000258781 A0A0J9YXY3 114 aa19.17■□□□□ 0.66
CCM2-201ENST00000258781 TMEM238LA0A1B0GVL6 79 aa19.17■□□□□ 0.66
CCM2-201ENST00000258781 A6NJY4 79 aa19.17■□□□□ 0.66
CCM2-201ENST00000258781 HTN3P15516 51 aa19.17■□□□□ 0.66
CCM2-201ENST00000258781 C12orf74Q32Q52 190 aa19.17■□□□□ 0.66
CCM2-201ENST00000258781 A0A1B0GWB2 263 aa19.16■□□□□ 0.66
CCM2-201ENST00000258781 VAMP3Q15836 100 aa19.16■□□□□ 0.66
CCM2-201ENST00000258781 RAB37Q96AX2 223 aa19.16■□□□□ 0.66
CCM2-201ENST00000258781 SMIM1B2RUZ4 78 aa19.15■□□□□ 0.66
CCM2-201ENST00000258781 TMEM238C9JI98 176 aa19.15■□□□□ 0.66
CCM2-201ENST00000258781 ICOSQ9Y6W8 199 aa19.15■□□□□ 0.66
CCM2-201ENST00000258781 K7ERJ3 54 aa19.14■□□□□ 0.65
CCM2-201ENST00000258781 IGHV3-30P01768 117 aa19.14■□□□□ 0.65
CCM2-201ENST00000258781 IGHV3-30-5P0DP03 117 aa19.14■□□□□ 0.65
CCM2-201ENST00000258781 TM2D3Q9BRN9 247 aa19.14■□□□□ 0.65
CCM2-201ENST00000258781 RBX1P62877 108 aa19.14■□□□□ 0.65
CCM2-201ENST00000258781 TMEM262E9PQX1 116 aa19.13■□□□□ 0.65
CCM2-201ENST00000258781 UBE2V1Q13404 147 aa19.13■□□□□ 0.65
CCM2-201ENST00000258781 PRKDCP78527 4128 aaKnown RBP19.12■□□□□ 0.65
CCM2-201ENST00000258781 H3BUT2 72 aa19.11■□□□□ 0.65
CCM2-201ENST00000258781 NDUFA1O15239 70 aa19.11■□□□□ 0.65
CCM2-201ENST00000258781 COL7A1Q02388 2944 aa19.11■□□□□ 0.65
CCM2-201ENST00000258781 SPATA25Q9BR10 227 aa19.11■□□□□ 0.65
CCM2-201ENST00000258781 MEGF8Q7Z7M0 2845 aa19.1■□□□□ 0.65
CCM2-201ENST00000258781 IGKV3OR2-268A0A0C4DH90 116 aa19.08■□□□□ 0.65
CCM2-201ENST00000258781 LITAFQ99732 161 aa19.08■□□□□ 0.65
CCM2-201ENST00000258781 LINC00959A0A1B0GUT2 108 aa19.07■□□□□ 0.64
CCM2-201ENST00000258781 H3BNG1 76 aa19.07■□□□□ 0.64
CCM2-201ENST00000258781 TIMM17BO60830 172 aa19.07■□□□□ 0.64
CCM2-201ENST00000258781 LELP1Q5T871 98 aa19.06■□□□□ 0.64
CCM2-201ENST00000258781 IGHV3OR16-9A0A0B4J2B5 98 aa19.05■□□□□ 0.64
CCM2-201ENST00000258781 A0A0J9YWU9 116 aa19.05■□□□□ 0.64
CCM2-201ENST00000258781 A0A1W2PPM0 123 aa19.05■□□□□ 0.64
CCM2-201ENST00000258781 NAA38Q9BRA0 125 aaKnown RBP19.05■□□□□ 0.64
CCM2-201ENST00000258781 SPANXDQ9BXN6 97 aa19.05■□□□□ 0.64
CCM2-201ENST00000258781 SPANXCQ9NY87 97 aa19.05■□□□□ 0.64
CCM2-201ENST00000258781 CCL25O15444 150 aa19.04■□□□□ 0.64
CCM2-201ENST00000258781 IGLL5B9A064 214 aa19.03■□□□□ 0.64
CCM2-201ENST00000258781 SS18Q15532 418 aa19.03■□□□□ 0.64
CCM2-201ENST00000258781 RPL24P83731 157 aaKnown RBP19.02■□□□□ 0.64
CCM2-201ENST00000258781 Q6ZTC4 211 aa19.02■□□□□ 0.64
CCM2-201ENST00000258781 Q9H8V8 135 aa19.02■□□□□ 0.64
CCM2-201ENST00000258781 A0A087WZ39 114 aa19.01■□□□□ 0.63
CCM2-201ENST00000258781 MUSTN1Q8IVN3 82 aa19.01■□□□□ 0.63
CCM2-201ENST00000258781 FABP2P12104 132 aa19■□□□□ 0.63
CCM2-201ENST00000258781 ZNF625Q96I27 306 aaPredicted RBP19■□□□□ 0.63
CCM2-201ENST00000258781 MIAQ16674 131 aa18.99■□□□□ 0.63
CCM2-201ENST00000258781 B9D2Q9BPU9 175 aa18.99■□□□□ 0.63
CCM2-201ENST00000258781 ADAMTSL4-AS1Q5T5F5 129 aa18.99■□□□□ 0.63
CCM2-201ENST00000258781 GTF2H5Q6ZYL4 71 aa18.99■□□□□ 0.63
CCM2-201ENST00000258781 GAGE10A6NGK3 116 aa18.98■□□□□ 0.63
CCM2-201ENST00000258781 HERV-K104P63124 156 aa18.98■□□□□ 0.63
CCM2-201ENST00000258781 K7EP34 96 aa18.97■□□□□ 0.63
CCM2-201ENST00000258781 CIRBPQ14011 172 aaKnown RBP18.97■□□□□ 0.63
CCM2-201ENST00000258781 COX7B2Q8TF08 81 aa18.97■□□□□ 0.63
CCM2-201ENST00000258781 A4D1N5 150 aa18.97■□□□□ 0.63
CCM2-201ENST00000258781 APOMO95445 188 aa18.97■□□□□ 0.63
CCM2-201ENST00000258781 CFC1BP0CG36 223 aa18.97■□□□□ 0.63
CCM2-201ENST00000258781 CFC1P0CG37 223 aa18.97■□□□□ 0.63
CCM2-201ENST00000258781 LYPD5Q6UWN5 251 aa18.97■□□□□ 0.63
CCM2-201ENST00000258781 C11orf45Q8TAV5 145 aa18.97■□□□□ 0.63
CCM2-201ENST00000258781 STAB2Q8WWQ8 2551 aa18.96■□□□□ 0.63
CCM2-201ENST00000258781 LINC00269Q8N2A0 174 aa18.96■□□□□ 0.63
CCM2-201ENST00000258781 ANGP03950 147 aaKnown RBP18.94■□□□□ 0.62
CCM2-201ENST00000258781 LINC01561Q8N1V8 128 aa18.94■□□□□ 0.62
CCM2-201ENST00000258781 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.94■□□□□ 0.62
CCM2-201ENST00000258781 IFITM1P13164 125 aa18.94■□□□□ 0.62
CCM2-201ENST00000258781 CLPSL2Q6UWE3 100 aa18.94■□□□□ 0.62
CCM2-201ENST00000258781 PGPEP1Q9NXJ5 209 aa18.94■□□□□ 0.62
CCM2-201ENST00000258781 SPCS1Q9Y6A9 102 aa18.94■□□□□ 0.62
CCM2-201ENST00000258781 PRSS2P07478 247 aa18.93■□□□□ 0.62
CCM2-201ENST00000258781 XCL1P47992 114 aa18.93■□□□□ 0.62
CCM2-201ENST00000258781 NANOS2P60321 138 aaKnown RBP18.93■□□□□ 0.62
CCM2-201ENST00000258781 C5orf38Q86SI9 138 aa18.93■□□□□ 0.62
CCM2-201ENST00000258781 Q8N3U1 123 aa18.92■□□□□ 0.62
CCM2-201ENST00000258781 A0A0B4J2C4 111 aa18.92■□□□□ 0.62
CCM2-201ENST00000258781 REG3AQ06141 175 aa18.92■□□□□ 0.62
CCM2-201ENST00000258781 PRO1854Q9UHT4 67 aa18.9■□□□□ 0.62
CCM2-201ENST00000258781 DEFB131BA0A096LNP1 70 aa18.89■□□□□ 0.61
CCM2-201ENST00000258781 CD164L2Q6UWJ8 174 aa18.89■□□□□ 0.61
CCM2-201ENST00000258781 TSPAN13O95857 204 aa18.88■□□□□ 0.61
CCM2-201ENST00000258781 TOMM7Q9P0U1 55 aa18.88■□□□□ 0.61
CCM2-201ENST00000258781 MEIG1Q5JSS6 88 aa18.87■□□□□ 0.61
CCM2-201ENST00000258781 SFTA2Q6UW10 78 aa18.87■□□□□ 0.61
CCM2-201ENST00000258781 CHCHD10Q8WYQ3 142 aaPredicted RBP18.87■□□□□ 0.61
CCM2-201ENST00000258781 EIF4EBP3O60516 100 aaPredicted RBP18.86■□□□□ 0.61
CCM2-201ENST00000258781 COPS9Q8WXC6 57 aa18.86■□□□□ 0.61
CCM2-201ENST00000258781 PRR34Q9NV39 138 aa18.85■□□□□ 0.61
CCM2-201ENST00000258781 DAND5Q8N907 189 aa18.84■□□□□ 0.61
CCM2-201ENST00000258781 COX7A2LO14548 114 aa18.83■□□□□ 0.6
CCM2-201ENST00000258781 NPC2P61916 151 aa18.82■□□□□ 0.6
CCM2-201ENST00000258781 Q8IZM0 81 aa18.82■□□□□ 0.6
CCM2-201ENST00000258781 LINC00308Q8TCZ7 52 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms