RNA–Protein interactions for RNA: ENST00000252595.11

SLC27A1-201, Transcript of solute carrier family 27 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC27A1, Length 3,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1-201ENST00000252595 Q8N2B8 174 aa11.85□□□□□ -0.51
SLC27A1-201ENST00000252595 PDZD2O15018 2839 aa11.85□□□□□ -0.51
SLC27A1-201ENST00000252595 TRAV25A0A0B4J276 109 aa11.85□□□□□ -0.51
SLC27A1-201ENST00000252595 TRAV4A0A0B4J268 109 aa11.84□□□□□ -0.51
SLC27A1-201ENST00000252595 DAD1P61803 113 aa11.84□□□□□ -0.51
SLC27A1-201ENST00000252595 MRPS36P82909 103 aaKnown RBP11.84□□□□□ -0.51
SLC27A1-201ENST00000252595 TINCRA0A1B0GVN0 87 aa11.84□□□□□ -0.51
SLC27A1-201ENST00000252595 FOXI1Q12951 378 aa11.84□□□□□ -0.51
SLC27A1-201ENST00000252595 ATXN8Q156A1 80 aa11.84□□□□□ -0.51
SLC27A1-201ENST00000252595 FAM110AQ9BQ89 295 aa11.84□□□□□ -0.51
SLC27A1-201ENST00000252595 TEX49A0A1B0GTD5 131 aa11.83□□□□□ -0.52
SLC27A1-201ENST00000252595 MALP21145 153 aa11.83□□□□□ -0.52
SLC27A1-201ENST00000252595 HILS1P60008 231 aa11.83□□□□□ -0.52
SLC27A1-201ENST00000252595 DNAJC30Q96LL9 226 aa11.83□□□□□ -0.52
SLC27A1-201ENST00000252595 DAZ2Q13117 558 aaKnown RBP11.83□□□□□ -0.52
SLC27A1-201ENST00000252595 DAZ4Q86SG3 579 aaKnown RBP11.83□□□□□ -0.52
SLC27A1-201ENST00000252595 ATP6V0E2Q8NHE4 81 aa11.83□□□□□ -0.52
SLC27A1-201ENST00000252595 DAZ3Q9NR90 486 aaKnown RBP11.83□□□□□ -0.52
SLC27A1-201ENST00000252595 FBN1P35555 2871 aaKnown RBP11.83□□□□□ -0.52
SLC27A1-201ENST00000252595 MIR7-3HGQ8N6C7 128 aa11.83□□□□□ -0.52
SLC27A1-201ENST00000252595 ICOSQ9Y6W8 199 aa11.83□□□□□ -0.52
SLC27A1-201ENST00000252595 IGLV1-51P01701 117 aa11.82□□□□□ -0.52
SLC27A1-201ENST00000252595 CARD19Q96LW7 228 aa11.82□□□□□ -0.52
SLC27A1-201ENST00000252595 AMELXQ99217 191 aa11.82□□□□□ -0.52
SLC27A1-201ENST00000252595 Q8N3U1 123 aa11.81□□□□□ -0.52
SLC27A1-201ENST00000252595 PYGO1Q9Y3Y4 419 aa11.81□□□□□ -0.52
SLC27A1-201ENST00000252595 TRBV20-1A0A075B6N2 111 aa11.81□□□□□ -0.52
SLC27A1-201ENST00000252595 LINC01620Q4KN68 170 aa11.81□□□□□ -0.52
SLC27A1-201ENST00000252595 Q9HAA7 133 aa11.81□□□□□ -0.52
SLC27A1-201ENST00000252595 SMCPP49901 116 aaPredicted RBP11.8□□□□□ -0.52
SLC27A1-201ENST00000252595 MIAQ16674 131 aa11.8□□□□□ -0.52
SLC27A1-201ENST00000252595 TRAV26-1A0A087WT03 109 aa11.8□□□□□ -0.52
SLC27A1-201ENST00000252595 CKS1BP61024 79 aa11.8□□□□□ -0.52
SLC27A1-201ENST00000252595 PPDPFLQ8WWR9 84 aa11.8□□□□□ -0.52
SLC27A1-201ENST00000252595 PRB2P02812 416 aaPredicted RBP11.79□□□□□ -0.52
SLC27A1-201ENST00000252595 UBE2D3P61077 147 aa11.79□□□□□ -0.52
SLC27A1-201ENST00000252595 UBE2D2P62837 147 aa11.79□□□□□ -0.52
SLC27A1-201ENST00000252595 OXLD1Q5BKU9 147 aa11.79□□□□□ -0.52
SLC27A1-201ENST00000252595 CRPP02741 224 aa11.78□□□□□ -0.52
SLC27A1-201ENST00000252595 MT-ATP8P03928 68 aa11.78□□□□□ -0.52
SLC27A1-201ENST00000252595 ATP5G1P05496 136 aa11.78□□□□□ -0.52
SLC27A1-201ENST00000252595 TEN1Q86WV5 123 aa11.78□□□□□ -0.52
SLC27A1-201ENST00000252595 CDC42SE2Q9NRR3 84 aa11.78□□□□□ -0.52
SLC27A1-201ENST00000252595 CMC4P56277 68 aaPredicted RBP11.78□□□□□ -0.52
SLC27A1-201ENST00000252595 BEAN1Q3B7T3 259 aa11.78□□□□□ -0.52
SLC27A1-201ENST00000252595 LINC00269Q8N2A0 174 aa11.78□□□□□ -0.52
SLC27A1-201ENST00000252595 GIG44P09565 113 aaPredicted RBP11.77□□□□□ -0.52
SLC27A1-201ENST00000252595 KRTAP1-1Q07627 177 aa11.77□□□□□ -0.52
SLC27A1-201ENST00000252595 FHL3Q13643 280 aa11.77□□□□□ -0.52
SLC27A1-201ENST00000252595 DNAL4O96015 105 aa11.77□□□□□ -0.53
SLC27A1-201ENST00000252595 LINC00308Q8TCZ7 52 aa11.77□□□□□ -0.53
SLC27A1-201ENST00000252595 TRBV10-1A0A0K0K1A3 114 aa11.77□□□□□ -0.53
SLC27A1-201ENST00000252595 TRBV6-8A0A0A6YYG3 113 aa11.76□□□□□ -0.53
SLC27A1-201ENST00000252595 KRTAP10-3P60369 221 aa11.76□□□□□ -0.53
SLC27A1-201ENST00000252595 SMIM1B2RUZ4 78 aa11.76□□□□□ -0.53
SLC27A1-201ENST00000252595 ZFAND6Q6FIF0 208 aa11.76□□□□□ -0.53
SLC27A1-201ENST00000252595 CFAP161Q6P656 301 aa11.76□□□□□ -0.53
SLC27A1-201ENST00000252595 COX7B2Q8TF08 81 aa11.76□□□□□ -0.53
SLC27A1-201ENST00000252595 TTC32Q5I0X7 151 aa11.75□□□□□ -0.53
SLC27A1-201ENST00000252595 SND1-IT1Q9HBX3 110 aa11.75□□□□□ -0.53
SLC27A1-201ENST00000252595 TRAV8-4A0A0B4J246 113 aa11.75□□□□□ -0.53
SLC27A1-201ENST00000252595 MRAPQ8TCY5 172 aa11.75□□□□□ -0.53
SLC27A1-201ENST00000252595 SNCGO76070 127 aa11.74□□□□□ -0.53
SLC27A1-201ENST00000252595 SS18Q15532 418 aa11.74□□□□□ -0.53
SLC27A1-201ENST00000252595 PRR3P79522 188 aaKnown RBP11.74□□□□□ -0.53
SLC27A1-201ENST00000252595 RETNQ9HD89 108 aa11.74□□□□□ -0.53
SLC27A1-201ENST00000252595 FHL2Q14192 279 aa11.74□□□□□ -0.53
SLC27A1-201ENST00000252595 FAM104AQ969W3 186 aa11.73□□□□□ -0.53
SLC27A1-201ENST00000252595 UBE2WQ96B02 151 aa11.73□□□□□ -0.53
SLC27A1-201ENST00000252595 KLK12Q9UKR0 248 aa11.73□□□□□ -0.53
SLC27A1-201ENST00000252595 C9orf116Q5BN46 136 aaPredicted RBP11.72□□□□□ -0.53
SLC27A1-201ENST00000252595 PRO0461Q9UI25 63 aa11.72□□□□□ -0.53
SLC27A1-201ENST00000252595 A0A0B4J2C4 111 aa11.71□□□□□ -0.54
SLC27A1-201ENST00000252595 IGHV4-28A0A0C4DH34 117 aa11.71□□□□□ -0.54
SLC27A1-201ENST00000252595 SLPIP03973 132 aa11.71□□□□□ -0.54
SLC27A1-201ENST00000252595 PRO0255Q9UI72 69 aa11.71□□□□□ -0.54
SLC27A1-201ENST00000252595 C3orf56Q8N813 242 aa11.7□□□□□ -0.54
SLC27A1-201ENST00000252595 NDUFA1O15239 70 aa11.69□□□□□ -0.54
SLC27A1-201ENST00000252595 DEFB121Q5J5C9 76 aa11.69□□□□□ -0.54
SLC27A1-201ENST00000252595 C9orf66Q5T8R8 295 aa11.69□□□□□ -0.54
SLC27A1-201ENST00000252595 BAHCC1Q9P281 2608 aa11.69□□□□□ -0.54
SLC27A1-201ENST00000252595 TRBV6-4A0A1B0GX49 114 aa11.69□□□□□ -0.54
SLC27A1-201ENST00000252595 XGP55808 180 aa11.69□□□□□ -0.54
SLC27A1-201ENST00000252595 TIRAPP58753 221 aa11.69□□□□□ -0.54
SLC27A1-201ENST00000252595 SOSTDC1Q6X4U4 206 aa11.69□□□□□ -0.54
SLC27A1-201ENST00000252595 GAGE2AQ6NT46 116 aa11.68□□□□□ -0.54
SLC27A1-201ENST00000252595 CELA1Q9UNI1 258 aa11.67□□□□□ -0.54
SLC27A1-201ENST00000252595 BAALC-AS2P0C853 105 aa11.66□□□□□ -0.54
SLC27A1-201ENST00000252595 LITAFQ99732 161 aa11.66□□□□□ -0.54
SLC27A1-201ENST00000252595 TRRAPQ9Y4A5 3859 aa11.66□□□□□ -0.54
SLC27A1-201ENST00000252595 C19orf73Q9NVV2 129 aa11.66□□□□□ -0.54
SLC27A1-201ENST00000252595 APOC4P55056 127 aa11.65□□□□□ -0.54
SLC27A1-201ENST00000252595 GAGE2BQ13066 116 aa11.65□□□□□ -0.54
SLC27A1-201ENST00000252595 GAGE2EQ4V326 116 aa11.65□□□□□ -0.54
SLC27A1-201ENST00000252595 C15orf53Q8NAA6 179 aa11.65□□□□□ -0.54
SLC27A1-201ENST00000252595 GAGE2DQ9UEU5 116 aa11.65□□□□□ -0.54
SLC27A1-201ENST00000252595 LINC00959A0A1B0GUT2 108 aa11.65□□□□□ -0.54
SLC27A1-201ENST00000252595 PLAC8L1A1L4L8 177 aa11.65□□□□□ -0.54
SLC27A1-201ENST00000252595 CLUHP3Q96NS8 147 aa11.64□□□□□ -0.55
SLC27A1-201ENST00000252595 PKD1L1Q8TDX9 2849 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms