RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 DPM2O94777 84 aa7.66□□□□□ -1.18
TNFAIP3-201ENST00000237289 LINC00694P0DN24 101 aa7.66□□□□□ -1.18
TNFAIP3-201ENST00000237289 ESDP10768 282 aa7.66□□□□□ -1.18
TNFAIP3-201ENST00000237289 ARL17AQ8IVW1 177 aa7.66□□□□□ -1.18
TNFAIP3-201ENST00000237289 PRSS29PA6NIE9 313 aa7.66□□□□□ -1.18
TNFAIP3-201ENST00000237289 DPH3Q96FX2 82 aa7.66□□□□□ -1.18
TNFAIP3-201ENST00000237289 PYGO1Q9Y3Y4 419 aa7.66□□□□□ -1.18
TNFAIP3-201ENST00000237289 A0A1B0GUV1 79 aa7.65□□□□□ -1.18
TNFAIP3-201ENST00000237289 SPCS1Q9Y6A9 102 aa7.65□□□□□ -1.18
TNFAIP3-201ENST00000237289 C3orf79P0CE67 100 aa7.65□□□□□ -1.18
TNFAIP3-201ENST00000237289 C5orf38Q86SI9 138 aa7.65□□□□□ -1.18
TNFAIP3-201ENST00000237289 CHAC1Q9BUX1 264 aa7.65□□□□□ -1.18
TNFAIP3-201ENST00000237289 hDV102S1A0JD36 115 aa7.65□□□□□ -1.19
TNFAIP3-201ENST00000237289 COX7A2LO14548 114 aa7.64□□□□□ -1.19
TNFAIP3-201ENST00000237289 C6orf226Q5I0X4 101 aa7.64□□□□□ -1.19
TNFAIP3-201ENST00000237289 C1orf134Q5TEV5 83 aa7.64□□□□□ -1.19
TNFAIP3-201ENST00000237289 IGLV4-60A0A075B6I1 120 aa7.64□□□□□ -1.19
TNFAIP3-201ENST00000237289 IGLV4-3A0A075B6K6 122 aa7.64□□□□□ -1.19
TNFAIP3-201ENST00000237289 GAGE12HA6NDE8 117 aa7.64□□□□□ -1.19
TNFAIP3-201ENST00000237289 SCGB1D4Q6XE38 83 aa7.64□□□□□ -1.19
TNFAIP3-201ENST00000237289 CHCHD10Q8WYQ3 142 aaPredicted RBP7.64□□□□□ -1.19
TNFAIP3-201ENST00000237289 IGKCP01834 107 aa7.64□□□□□ -1.19
TNFAIP3-201ENST00000237289 CKS1BP61024 79 aa7.64□□□□□ -1.19
TNFAIP3-201ENST00000237289 MRPL52Q86TS9 123 aaKnown RBP7.64□□□□□ -1.19
TNFAIP3-201ENST00000237289 CDC42SE2Q9NRR3 84 aa7.64□□□□□ -1.19
TNFAIP3-201ENST00000237289 NBDYA0A0U1RRE5 68 aa7.63□□□□□ -1.19
TNFAIP3-201ENST00000237289 SYS1-DBNDD2H3BUS1 97 aa7.63□□□□□ -1.19
TNFAIP3-201ENST00000237289 NUPR1O60356 82 aa7.63□□□□□ -1.19
TNFAIP3-201ENST00000237289 PLNP26678 52 aa7.63□□□□□ -1.19
TNFAIP3-201ENST00000237289 BAALCQ8WXS3 180 aa7.63□□□□□ -1.19
TNFAIP3-201ENST00000237289 LGALS3P17931 250 aaKnown RBP7.63□□□□□ -1.19
TNFAIP3-201ENST00000237289 SRSF9Q13242 221 aaKnown RBP eCLIP7.63□□□□□ -1.19
TNFAIP3-201ENST00000237289 COA6Q5JTJ3 125 aaKnown RBP7.63□□□□□ -1.19
TNFAIP3-201ENST00000237289 CST9LQ9H4G1 147 aa7.63□□□□□ -1.19
TNFAIP3-201ENST00000237289 A0A0J9YXV3 536 aa7.63□□□□□ -1.19
TNFAIP3-201ENST00000237289 MRPS36P82909 103 aaKnown RBP7.63□□□□□ -1.19
TNFAIP3-201ENST00000237289 IGHV3-64A0A075B6Q5 118 aa7.62□□□□□ -1.19
TNFAIP3-201ENST00000237289 H7C2G1 150 aa7.62□□□□□ -1.19
TNFAIP3-201ENST00000237289 OCIAD2Q56VL3 154 aa7.62□□□□□ -1.19
TNFAIP3-201ENST00000237289 CSDC2Q9Y534 153 aaKnown RBP7.62□□□□□ -1.19
TNFAIP3-201ENST00000237289 F8VRH5 84 aa7.62□□□□□ -1.19
TNFAIP3-201ENST00000237289 DNAH10OSP0CZ25 163 aa7.62□□□□□ -1.19
TNFAIP3-201ENST00000237289 ZC2HC1BQ5TFG8 222 aa7.62□□□□□ -1.19
TNFAIP3-201ENST00000237289 LINC00476Q8WZB0 136 aa7.62□□□□□ -1.19
TNFAIP3-201ENST00000237289 MRPL35Q9NZE8 188 aaKnown RBP7.62□□□□□ -1.19
TNFAIP3-201ENST00000237289 LINC00959A0A1B0GUT2 108 aa7.61□□□□□ -1.19
TNFAIP3-201ENST00000237289 C14orf177Q52M58 125 aa7.61□□□□□ -1.19
TNFAIP3-201ENST00000237289 ORAOV1Q8WV07 137 aa7.61□□□□□ -1.19
TNFAIP3-201ENST00000237289 UPK3BQ9BT76 320 aa7.61□□□□□ -1.19
TNFAIP3-201ENST00000237289 A0A1B0GWB2 263 aa7.61□□□□□ -1.19
TNFAIP3-201ENST00000237289 PSMB2P49721 201 aa7.61□□□□□ -1.19
TNFAIP3-201ENST00000237289 MEIG1Q5JSS6 88 aa7.6□□□□□ -1.19
TNFAIP3-201ENST00000237289 LINC00173Q6ZV60 143 aa7.6□□□□□ -1.19
TNFAIP3-201ENST00000237289 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.6□□□□□ -1.19
TNFAIP3-201ENST00000237289 CD164L2Q6UWJ8 174 aa7.59□□□□□ -1.19
TNFAIP3-201ENST00000237289 C6orf223Q8N319 242 aa7.59□□□□□ -1.19
TNFAIP3-201ENST00000237289 HIST1H4GQ99525 98 aa7.59□□□□□ -1.19
TNFAIP3-201ENST00000237289 IGIPA6NJ69 53 aa7.59□□□□□ -1.19
TNFAIP3-201ENST00000237289 IBA57-AS1B1ANH7 110 aa7.59□□□□□ -1.19
TNFAIP3-201ENST00000237289 IGLC3P0DOY3 106 aa7.59□□□□□ -1.19
TNFAIP3-201ENST00000237289 Q8N3U1 123 aa7.59□□□□□ -1.19
TNFAIP3-201ENST00000237289 TRAV12-1A0A0B4J245 112 aa7.59□□□□□ -1.19
TNFAIP3-201ENST00000237289 URB1-AS1Q96HZ7 61 aa7.59□□□□□ -1.19
TNFAIP3-201ENST00000237289 MTURNQ8N3F0 131 aa7.58□□□□□ -1.2
TNFAIP3-201ENST00000237289 SIGMAR1Q99720 223 aa7.58□□□□□ -1.2
TNFAIP3-201ENST00000237289 NHP2Q9NX24 153 aaKnown RBP7.58□□□□□ -1.2
TNFAIP3-201ENST00000237289 SPINK8P0C7L1 97 aa7.58□□□□□ -1.2
TNFAIP3-201ENST00000237289 SMIM13P0DJ93 91 aa7.58□□□□□ -1.2
TNFAIP3-201ENST00000237289 CIRBPQ14011 172 aaKnown RBP7.58□□□□□ -1.2
TNFAIP3-201ENST00000237289 LECT2O14960 151 aa7.58□□□□□ -1.2
TNFAIP3-201ENST00000237289 PLEKHB2Q96CS7 222 aa7.58□□□□□ -1.2
TNFAIP3-201ENST00000237289 TENM3Q9P273 2699 aa7.57□□□□□ -1.2
TNFAIP3-201ENST00000237289 CAMK2N2Q96S95 79 aa7.57□□□□□ -1.2
TNFAIP3-201ENST00000237289 IGHV1-58A0A0C4DH39 117 aa7.56□□□□□ -1.2
TNFAIP3-201ENST00000237289 TINCRA0A1B0GVN0 87 aa7.56□□□□□ -1.2
TNFAIP3-201ENST00000237289 FBN3Q75N90 2809 aa7.56□□□□□ -1.2
TNFAIP3-201ENST00000237289 SPAG11BQ08648 103 aa7.56□□□□□ -1.2
TNFAIP3-201ENST00000237289 HIGD2BQ4VC39 106 aa7.56□□□□□ -1.2
TNFAIP3-201ENST00000237289 ANK2Q01484 3957 aa7.56□□□□□ -1.2
TNFAIP3-201ENST00000237289 DNHD1Q96M86 4753 aa7.55□□□□□ -1.2
TNFAIP3-201ENST00000237289 LINC01546A6NGU7 62 aa7.55□□□□□ -1.2
TNFAIP3-201ENST00000237289 UBE2D1P51668 147 aa7.55□□□□□ -1.2
TNFAIP3-201ENST00000237289 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.55□□□□□ -1.2
TNFAIP3-201ENST00000237289 C11orf86A6NJI1 115 aa7.54□□□□□ -1.2
TNFAIP3-201ENST00000237289 TMEM238C9JI98 176 aa7.54□□□□□ -1.2
TNFAIP3-201ENST00000237289 CDKN2A-AS1Q9UH64 79 aa7.54□□□□□ -1.2
TNFAIP3-201ENST00000237289 RPL13AP40429 203 aaKnown RBP7.54□□□□□ -1.2
TNFAIP3-201ENST00000237289 ODF1Q14990 250 aa7.54□□□□□ -1.2
TNFAIP3-201ENST00000237289 AMELXQ99217 191 aa7.54□□□□□ -1.2
TNFAIP3-201ENST00000237289 MYMXA0A1B0GTQ4 84 aa7.53□□□□□ -1.2
TNFAIP3-201ENST00000237289 NDUFA1O15239 70 aa7.53□□□□□ -1.2
TNFAIP3-201ENST00000237289 ENHOQ6UWT2 76 aa7.53□□□□□ -1.2
TNFAIP3-201ENST00000237289 PKIGQ9Y2B9 76 aa7.53□□□□□ -1.2
TNFAIP3-201ENST00000237289 A0A096LNJ9 63 aa7.53□□□□□ -1.2
TNFAIP3-201ENST00000237289 LINC00242Q5T6M2 205 aa7.53□□□□□ -1.2
TNFAIP3-201ENST00000237289 LINC00158P58513 81 aa7.53□□□□□ -1.2
TNFAIP3-201ENST00000237289 LINC00310P59036 64 aa7.53□□□□□ -1.2
TNFAIP3-201ENST00000237289 COX7B2Q8TF08 81 aa7.52□□□□□ -1.21
TNFAIP3-201ENST00000237289 ZNF625Q96I27 306 aaPredicted RBP7.52□□□□□ -1.21
TNFAIP3-201ENST00000237289 A0A0U1RRA0 63 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms