RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 LGALS9BQ3B8N2 356 aa3.86□□□□□ -1.79
TRAPPC13-201ENST00000231526 LGALS9CQ6DKI2 356 aa3.86□□□□□ -1.79
TRAPPC13-201ENST00000231526 Q6ZTI0 123 aa3.86□□□□□ -1.79
TRAPPC13-201ENST00000231526 CSNK1G2-AS1Q8NCQ2 148 aa3.86□□□□□ -1.79
TRAPPC13-201ENST00000231526 WFDC9Q8NEX5 89 aa3.86□□□□□ -1.79
TRAPPC13-201ENST00000231526 C16orf74Q96GX8 76 aa3.86□□□□□ -1.79
TRAPPC13-201ENST00000231526 SCGB3A1Q96QR1 104 aa3.86□□□□□ -1.79
TRAPPC13-201ENST00000231526 ANK2Q01484 3957 aa3.85□□□□□ -1.79
TRAPPC13-201ENST00000231526 TRGV2A0A075B6R0 118 aa3.85□□□□□ -1.79
TRAPPC13-201ENST00000231526 ZFP2Q6ZN57 461 aa3.85□□□□□ -1.79
TRAPPC13-201ENST00000231526 PRIMA1Q86XR5 153 aa3.85□□□□□ -1.79
TRAPPC13-201ENST00000231526 DKK2Q9UBU2 259 aa3.85□□□□□ -1.79
TRAPPC13-201ENST00000231526 TRBV6-5A0A0K0K1A5 114 aa3.85□□□□□ -1.79
TRAPPC13-201ENST00000231526 PFN2P35080 140 aa3.85□□□□□ -1.79
TRAPPC13-201ENST00000231526 RPL39P62891 51 aaKnown RBP3.85□□□□□ -1.79
TRAPPC13-201ENST00000231526 TOMM6Q96B49 74 aa3.85□□□□□ -1.79
TRAPPC13-201ENST00000231526 I3L3M4 83 aa3.84□□□□□ -1.79
TRAPPC13-201ENST00000231526 NDUFV3P56181 108 aaKnown RBP3.84□□□□□ -1.79
TRAPPC13-201ENST00000231526 UFSP1Q6NVU6 142 aa3.84□□□□□ -1.79
TRAPPC13-201ENST00000231526 Q6ZSN1 163 aa3.84□□□□□ -1.79
TRAPPC13-201ENST00000231526 C2orf91Q6ZV80 131 aa3.84□□□□□ -1.79
TRAPPC13-201ENST00000231526 COX8AP10176 69 aa3.84□□□□□ -1.8
TRAPPC13-201ENST00000231526 DEFB135Q30KP9 77 aa3.84□□□□□ -1.8
TRAPPC13-201ENST00000231526 NEXN-AS1Q8NBZ9 246 aa3.84□□□□□ -1.8
TRAPPC13-201ENST00000231526 MGAM2Q2M2H8 2515 aa3.83□□□□□ -1.8
TRAPPC13-201ENST00000231526 TRAV4A0A0B4J268 109 aa3.83□□□□□ -1.8
TRAPPC13-201ENST00000231526 IGHV3-38A0A0C4DH36 116 aa3.83□□□□□ -1.8
TRAPPC13-201ENST00000231526 DPM2O94777 84 aa3.83□□□□□ -1.8
TRAPPC13-201ENST00000231526 Q6ZRU5 148 aa3.83□□□□□ -1.8
TRAPPC13-201ENST00000231526 RAB37Q96AX2 223 aa3.83□□□□□ -1.8
TRAPPC13-201ENST00000231526 MRPL35Q9NZE8 188 aaKnown RBP3.83□□□□□ -1.8
TRAPPC13-201ENST00000231526 PYGO1Q9Y3Y4 419 aa3.83□□□□□ -1.8
TRAPPC13-201ENST00000231526 NBEAL1Q6ZS30 2694 aa3.83□□□□□ -1.8
TRAPPC13-201ENST00000231526 LINC01549A6NIU2 74 aa3.83□□□□□ -1.8
TRAPPC13-201ENST00000231526 H3BUT2 72 aa3.83□□□□□ -1.8
TRAPPC13-201ENST00000231526 IGKCP01834 107 aa3.83□□□□□ -1.8
TRAPPC13-201ENST00000231526 DEFB130BP0DP73 79 aa3.83□□□□□ -1.8
TRAPPC13-201ENST00000231526 DEFB130AP0DP74 79 aa3.83□□□□□ -1.8
TRAPPC13-201ENST00000231526 TTC32Q5I0X7 151 aa3.83□□□□□ -1.8
TRAPPC13-201ENST00000231526 TRBV7-3A0A075B6L6 115 aa3.82□□□□□ -1.8
TRAPPC13-201ENST00000231526 LOC100131303A0A0U1RQF7 123 aa3.82□□□□□ -1.8
TRAPPC13-201ENST00000231526 A6NDN8 102 aa3.82□□□□□ -1.8
TRAPPC13-201ENST00000231526 F8VRH5 84 aa3.82□□□□□ -1.8
TRAPPC13-201ENST00000231526 TSHBP01222 138 aa3.82□□□□□ -1.8
TRAPPC13-201ENST00000231526 IGHV4-30-4P0DP06 118 aa3.82□□□□□ -1.8
TRAPPC13-201ENST00000231526 NMUP48645 174 aa3.82□□□□□ -1.8
TRAPPC13-201ENST00000231526 SEC61BP60468 96 aaKnown RBP3.82□□□□□ -1.8
TRAPPC13-201ENST00000231526 RHOHQ15669 191 aa3.82□□□□□ -1.8
TRAPPC13-201ENST00000231526 ZC2HC1BQ5TFG8 222 aa3.82□□□□□ -1.8
TRAPPC13-201ENST00000231526 TRGV4A0A0C4DH28 118 aa3.82□□□□□ -1.8
TRAPPC13-201ENST00000231526 K7EQD1 137 aa3.82□□□□□ -1.8
TRAPPC13-201ENST00000231526 RPL36AP83881 106 aaKnown RBP3.82□□□□□ -1.8
TRAPPC13-201ENST00000231526 SLC25A29Q8N8R3 303 aa3.82□□□□□ -1.8
TRAPPC13-201ENST00000231526 C20orf203Q8NBC4 194 aa3.82□□□□□ -1.8
TRAPPC13-201ENST00000231526 RPL36ALQ969Q0 106 aaKnown RBP3.82□□□□□ -1.8
TRAPPC13-201ENST00000231526 TEX48A0A1B0GUV7 120 aa3.81□□□□□ -1.8
TRAPPC13-201ENST00000231526 IGIPA6NJ69 53 aa3.81□□□□□ -1.8
TRAPPC13-201ENST00000231526 DEFB4AO15263 64 aa3.81□□□□□ -1.8
TRAPPC13-201ENST00000231526 SEC11AP67812 179 aa3.81□□□□□ -1.8
TRAPPC13-201ENST00000231526 PCP2Q8IVA1 136 aa3.81□□□□□ -1.8
TRAPPC13-201ENST00000231526 TIMM17AQ99595 171 aa3.81□□□□□ -1.8
TRAPPC13-201ENST00000231526 HHLA3Q9XRX5 114 aa3.81□□□□□ -1.8
TRAPPC13-201ENST00000231526 TRAV12-1A0A0B4J245 112 aa3.81□□□□□ -1.8
TRAPPC13-201ENST00000231526 PLNP26678 52 aa3.81□□□□□ -1.8
TRAPPC13-201ENST00000231526 HERVK_113P63121 156 aa3.81□□□□□ -1.8
TRAPPC13-201ENST00000231526 OPRPNQ99935 248 aaPredicted RBP3.81□□□□□ -1.8
TRAPPC13-201ENST00000231526 TRBV10-1A0A0K0K1A3 114 aa3.8□□□□□ -1.8
TRAPPC13-201ENST00000231526 C9orf118A6NHY6 69 aa3.8□□□□□ -1.8
TRAPPC13-201ENST00000231526 FAM222AQ5U5X8 452 aa3.8□□□□□ -1.8
TRAPPC13-201ENST00000231526 C3orf22Q8N5N4 141 aa3.8□□□□□ -1.8
TRAPPC13-201ENST00000231526 TMEM141Q96I45 108 aa3.8□□□□□ -1.8
TRAPPC13-201ENST00000231526 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.8□□□□□ -1.8
TRAPPC13-201ENST00000231526 IGKV2-29A2NJV5 120 aaPredicted RBP3.8□□□□□ -1.8
TRAPPC13-201ENST00000231526 H3BRM9 83 aa3.8□□□□□ -1.8
TRAPPC13-201ENST00000231526 K7EP34 96 aa3.8□□□□□ -1.8
TRAPPC13-201ENST00000231526 MT-ATP8P03928 68 aa3.8□□□□□ -1.8
TRAPPC13-201ENST00000231526 IFITM1P13164 125 aa3.8□□□□□ -1.8
TRAPPC13-201ENST00000231526 FOXI1Q12951 378 aa3.8□□□□□ -1.8
TRAPPC13-201ENST00000231526 CEMP1Q6PRD7 247 aaPredicted RBP3.8□□□□□ -1.8
TRAPPC13-201ENST00000231526 Q6ZUT4 128 aa3.8□□□□□ -1.8
TRAPPC13-201ENST00000231526 TTTY13Q9BZ97 58 aa3.8□□□□□ -1.8
TRAPPC13-201ENST00000231526 TRBV6-4A0A1B0GX49 114 aa3.79□□□□□ -1.8
TRAPPC13-201ENST00000231526 RNASE13Q5GAN3 156 aaKnown RBP3.79□□□□□ -1.8
TRAPPC13-201ENST00000231526 SPCS1Q9Y6A9 102 aa3.79□□□□□ -1.8
TRAPPC13-201ENST00000231526 IGKV2D-26A0A0A0MRZ7 120 aa3.79□□□□□ -1.8
TRAPPC13-201ENST00000231526 KRTAP10-11P60412 298 aa3.79□□□□□ -1.8
TRAPPC13-201ENST00000231526 DAD1P61803 113 aa3.79□□□□□ -1.8
TRAPPC13-201ENST00000231526 TMEM170BQ5T4T1 132 aa3.79□□□□□ -1.8
TRAPPC13-201ENST00000231526 FAM19A3Q7Z5A8 133 aa3.79□□□□□ -1.8
TRAPPC13-201ENST00000231526 DPH3Q96FX2 82 aa3.79□□□□□ -1.8
TRAPPC13-201ENST00000231526 CMYA5Q8N3K9 4069 aa3.79□□□□□ -1.8
TRAPPC13-201ENST00000231526 IGLV4-3A0A075B6K6 122 aa3.79□□□□□ -1.8
TRAPPC13-201ENST00000231526 IGHV4-28A0A0C4DH34 117 aa3.79□□□□□ -1.8
TRAPPC13-201ENST00000231526 A0A1W2PPM0 123 aa3.79□□□□□ -1.8
TRAPPC13-201ENST00000231526 C11orf86A6NJI1 115 aa3.79□□□□□ -1.8
TRAPPC13-201ENST00000231526 K7ERJ3 54 aa3.79□□□□□ -1.8
TRAPPC13-201ENST00000231526 SRSF9Q13242 221 aaKnown RBP eCLIP3.79□□□□□ -1.8
TRAPPC13-201ENST00000231526 FHL2Q14192 279 aa3.79□□□□□ -1.8
TRAPPC13-201ENST00000231526 SCGB1D4Q6XE38 83 aa3.79□□□□□ -1.8
TRAPPC13-201ENST00000231526 BRK1Q8WUW1 75 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms