RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 ZNF815PA8K554 130 aa6.04□□□□□ -1.44
SPARC-201ENST00000231061 PRB1P04280 392 aa6.04□□□□□ -1.44
SPARC-201ENST00000231061 Q75L30 129 aa6.04□□□□□ -1.44
SPARC-201ENST00000231061 ZFHX3Q15911 3703 aa6.04□□□□□ -1.44
SPARC-201ENST00000231061 KLLNB2CW77 178 aa6.03□□□□□ -1.44
SPARC-201ENST00000231061 REG3GQ6UW15 175 aa6.03□□□□□ -1.44
SPARC-201ENST00000231061 TLN2Q9Y4G6 2542 aa6.03□□□□□ -1.44
SPARC-201ENST00000231061 TMEM223A0PJW6 202 aa6.03□□□□□ -1.44
SPARC-201ENST00000231061 DEFB121Q5J5C9 76 aa6.03□□□□□ -1.44
SPARC-201ENST00000231061 IGKV3-7A0A075B6H7 116 aa6.03□□□□□ -1.44
SPARC-201ENST00000231061 IGKV3D-20A0A0C4DH25 116 aa6.03□□□□□ -1.44
SPARC-201ENST00000231061 A0A1W2PPR1 153 aa6.03□□□□□ -1.44
SPARC-201ENST00000231061 PRAC1Q96KF2 57 aa6.03□□□□□ -1.44
SPARC-201ENST00000231061 C11orf21Q9P2W6 132 aa6.03□□□□□ -1.44
SPARC-201ENST00000231061 TRBV12-3P01733 135 aa6.02□□□□□ -1.45
SPARC-201ENST00000231061 SYCNQ0VAF6 134 aa6.02□□□□□ -1.45
SPARC-201ENST00000231061 MAP6D1Q9H9H5 199 aa6.02□□□□□ -1.45
SPARC-201ENST00000231061 Q9HAA7 133 aa6.02□□□□□ -1.45
SPARC-201ENST00000231061 NDUFA12Q9UI09 145 aa6.02□□□□□ -1.45
SPARC-201ENST00000231061 CLPSL1A2RUU4 121 aa6.02□□□□□ -1.45
SPARC-201ENST00000231061 RNASE4P34096 147 aaKnown RBP6.02□□□□□ -1.45
SPARC-201ENST00000231061 KLK15Q9H2R5 256 aa6.02□□□□□ -1.45
SPARC-201ENST00000231061 PRM2P04554 102 aa6.01□□□□□ -1.45
SPARC-201ENST00000231061 ATP5EP56381 51 aaPredicted RBP6.01□□□□□ -1.45
SPARC-201ENST00000231061 DOPEY1Q5JWR5 2465 aa6.01□□□□□ -1.45
SPARC-201ENST00000231061 LINC01600Q96MT4 127 aa6.01□□□□□ -1.45
SPARC-201ENST00000231061 CFAP46Q8IYW2 2715 aa6.01□□□□□ -1.45
SPARC-201ENST00000231061 ZNF575Q86XF7 245 aa6.01□□□□□ -1.45
SPARC-201ENST00000231061 WFDC9Q8NEX5 89 aa6.01□□□□□ -1.45
SPARC-201ENST00000231061 SORL1Q92673 2214 aa6.01□□□□□ -1.45
SPARC-201ENST00000231061 IBA57-AS1B1ANH7 110 aa6□□□□□ -1.45
SPARC-201ENST00000231061 IGHV3-33P01772 117 aa6□□□□□ -1.45
SPARC-201ENST00000231061 LY6EQ16553 131 aa6□□□□□ -1.45
SPARC-201ENST00000231061 BRD3OSQ6XYD6 125 aa6□□□□□ -1.45
SPARC-201ENST00000231061 CNFNQ9BYD5 112 aa6□□□□□ -1.45
SPARC-201ENST00000231061 C16orf90A8MZG2 172 aa6□□□□□ -1.45
SPARC-201ENST00000231061 IGHV3-11P01762 117 aa6□□□□□ -1.45
SPARC-201ENST00000231061 MGPP08493 103 aa6□□□□□ -1.45
SPARC-201ENST00000231061 DEFB1P60022 68 aa6□□□□□ -1.45
SPARC-201ENST00000231061 HRNRQ86YZ3 2850 aaPredicted RBP5.99□□□□□ -1.45
SPARC-201ENST00000231061 A6NN06 94 aa5.99□□□□□ -1.45
SPARC-201ENST00000231061 C5orf56Q8N8D9 126 aa5.99□□□□□ -1.45
SPARC-201ENST00000231061 PHLDA3Q9Y5J5 127 aa5.99□□□□□ -1.45
SPARC-201ENST00000231061 SVEP1Q4LDE5 3571 aa5.99□□□□□ -1.45
SPARC-201ENST00000231061 HCG22E2RYF7 251 aa5.99□□□□□ -1.45
SPARC-201ENST00000231061 FAM218AQ96MZ4 157 aa5.99□□□□□ -1.45
SPARC-201ENST00000231061 UBE2D4Q9Y2X8 147 aa5.99□□□□□ -1.45
SPARC-201ENST00000231061 GCN1Q92616 2671 aaKnown RBP5.99□□□□□ -1.45
SPARC-201ENST00000231061 IGHV7-4-1A0A0J9YVY3 117 aa5.99□□□□□ -1.45
SPARC-201ENST00000231061 TRIAP1O43715 76 aa5.99□□□□□ -1.45
SPARC-201ENST00000231061 LMO4P61968 165 aa5.99□□□□□ -1.45
SPARC-201ENST00000231061 PRR9Q5T870 116 aa5.99□□□□□ -1.45
SPARC-201ENST00000231061 IGHV6-1A0A0B4J1U7 121 aa5.98□□□□□ -1.45
SPARC-201ENST00000231061 B4DSR2 109 aa5.98□□□□□ -1.45
SPARC-201ENST00000231061 CHKB-CPT1BH3BT56 60 aa5.98□□□□□ -1.45
SPARC-201ENST00000231061 COX6CP09669 75 aa5.98□□□□□ -1.45
SPARC-201ENST00000231061 Q6ZRP5 223 aa5.98□□□□□ -1.45
SPARC-201ENST00000231061 ASH1LQ9NR48 2969 aaKnown RBP5.98□□□□□ -1.45
SPARC-201ENST00000231061 KLKP1Q107X0 134 aa5.98□□□□□ -1.45
SPARC-201ENST00000231061 RPL28P46779 137 aaKnown RBP5.98□□□□□ -1.45
SPARC-201ENST00000231061 KIAA0087Q14695 138 aa5.98□□□□□ -1.45
SPARC-201ENST00000231061 ADAMTSL4-AS1Q5T5F5 129 aa5.98□□□□□ -1.45
SPARC-201ENST00000231061 C9orf47Q6ZRZ4 202 aa5.98□□□□□ -1.45
SPARC-201ENST00000231061 ATP11AUNQ6ZP68 121 aa5.97□□□□□ -1.45
SPARC-201ENST00000231061 C14orf178Q8N769 122 aaPredicted RBP5.97□□□□□ -1.45
SPARC-201ENST00000231061 SETD2Q9BYW2 2564 aaPredicted RBP5.97□□□□□ -1.45
SPARC-201ENST00000231061 TRAV22A0A0B4J277 110 aa5.97□□□□□ -1.45
SPARC-201ENST00000231061 DEFB104AQ8WTQ1 72 aa5.97□□□□□ -1.45
SPARC-201ENST00000231061 TMEM141Q96I45 108 aa5.97□□□□□ -1.45
SPARC-201ENST00000231061 SCGB3A1Q96QR1 104 aa5.97□□□□□ -1.45
SPARC-201ENST00000231061 HIVEP3Q5T1R4 2406 aa5.97□□□□□ -1.45
SPARC-201ENST00000231061 USP9YO00507 2555 aaPredicted RBP5.97□□□□□ -1.45
SPARC-201ENST00000231061 IGLV2-18A0A075B6J9 118 aa5.97□□□□□ -1.45
SPARC-201ENST00000231061 TRAV21A0A0B4J279 112 aa5.97□□□□□ -1.45
SPARC-201ENST00000231061 DNAL4O96015 105 aa5.97□□□□□ -1.45
SPARC-201ENST00000231061 KLHL30-AS1Q8NEE0 82 aa5.97□□□□□ -1.45
SPARC-201ENST00000231061 SMIM2Q9BVW6 85 aa5.97□□□□□ -1.45
SPARC-201ENST00000231061 RPL39LQ96EH5 51 aaKnown RBP5.96□□□□□ -1.45
SPARC-201ENST00000231061 SND1-IT1Q9HBX3 110 aa5.96□□□□□ -1.45
SPARC-201ENST00000231061 LINC01546A6NGU7 62 aa5.96□□□□□ -1.46
SPARC-201ENST00000231061 LEPROTO15243 131 aa5.96□□□□□ -1.46
SPARC-201ENST00000231061 TNP2Q05952 138 aa5.96□□□□□ -1.46
SPARC-201ENST00000231061 Q6JHZ5 121 aa5.96□□□□□ -1.46
SPARC-201ENST00000231061 C19orf84I3L1E1 186 aa5.95□□□□□ -1.46
SPARC-201ENST00000231061 IGHV1-69P01742 117 aa5.95□□□□□ -1.46
SPARC-201ENST00000231061 RETNLBQ9BQ08 111 aa5.95□□□□□ -1.46
SPARC-201ENST00000231061 H3BUX3 64 aa5.95□□□□□ -1.46
SPARC-201ENST00000231061 MIFP14174 115 aa5.95□□□□□ -1.46
SPARC-201ENST00000231061 RNASE13Q5GAN3 156 aaKnown RBP5.95□□□□□ -1.46
SPARC-201ENST00000231061 CHCHD10Q8WYQ3 142 aaPredicted RBP5.95□□□□□ -1.46
SPARC-201ENST00000231061 NOTCH3Q9UM47 2321 aa5.95□□□□□ -1.46
SPARC-201ENST00000231061 GNRH2O43555 120 aa5.95□□□□□ -1.46
SPARC-201ENST00000231061 NDUFC1O43677 76 aa5.95□□□□□ -1.46
SPARC-201ENST00000231061 PLNP26678 52 aa5.95□□□□□ -1.46
SPARC-201ENST00000231061 IGSF10Q6WRI0 2623 aa5.95□□□□□ -1.46
SPARC-201ENST00000231061 TRAV7A0A075B6U4 112 aa5.94□□□□□ -1.46
SPARC-201ENST00000231061 SDHAF1A6NFY7 115 aa5.94□□□□□ -1.46
SPARC-201ENST00000231061 RNF223E7ERA6 249 aa5.94□□□□□ -1.46
SPARC-201ENST00000231061 IGHV4-38-2P0DP08 117 aa5.94□□□□□ -1.46
SPARC-201ENST00000231061 ZFAND2AQ8N6M9 145 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms