RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 P03980 138 aa10.59□□□□□ -0.71
Pdlim5-208ENSMUST00000196220 Khdc1bP0C7A0 126 aa10.59□□□□□ -0.71
Pdlim5-208ENSMUST00000196220 Wfdc9Q3UW41 83 aa10.59□□□□□ -0.71
Pdlim5-208ENSMUST00000196220 Gm9945Q8BNZ3 91 aa10.59□□□□□ -0.71
Pdlim5-208ENSMUST00000196220 Spink6Q8BT20 105 aa10.59□□□□□ -0.71
Pdlim5-208ENSMUST00000196220 GaptQ8CB93 157 aa10.59□□□□□ -0.71
Pdlim5-208ENSMUST00000196220 RetnlgQ8K426 117 aa10.59□□□□□ -0.71
Pdlim5-208ENSMUST00000196220 Ubtd1Q91WB7 227 aa10.59□□□□□ -0.71
Pdlim5-208ENSMUST00000196220 Prr23a3Q9CWP9 254 aa10.59□□□□□ -0.71
Pdlim5-208ENSMUST00000196220 Ighv1-55A0A075B5W6 117 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Igkv1-131A0A140T8M8 120 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Olfr872E9PVW2 323 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 PspnO70300 156 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 P01787 123 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 KhkP97328 298 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Gm9949Q8C9F4 104 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Klre1Q8CJC7 226 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Chac2Q9CQG1 178 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Tmprss5Q9ER04 455 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 BlnkQ9QUN3 457 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 F5O88783 2183 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Zzef1Q5SSH7 2924 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Pkd1l2Q7TN88 2461 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Lrrk2Q5S006 2527 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Gm27021M0QWE2 156 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Adcyap1O70176 175 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Timp3P39876 211 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Ube2e1P52482 193 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Tac3P55099 116 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Cnn1Q08091 297 aaKnown RBP10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Tas2r114Q7M722 309 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Wipf1Q8K1I7 493 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Olfr481Q8VGI5 312 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Rnase4Q9JJH1 148 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Crybb3Q9JJU9 211 aa10.58□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Ighv3-1A0A075B5S6 116 aa10.57□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 D830044I16RikA0A1D5RM53 117 aa10.57□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Esp23A8R0V5 104 aa10.57□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Rpp30O88796 268 aaKnown RBP10.57□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Hist1h2bfP10853 126 aa10.57□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Stfa1P35175 97 aa10.57□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 B020031M17RikQ3UT11 173 aa10.57□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Hist1h2bbQ64475 126 aa10.57□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 OpalinQ7M750 143 aa10.57□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Gm10190Q8BSD7 107 aa10.57□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Hist1h2bkQ8CGP1 126 aaKnown RBP10.57□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Hist1h2bpQ8CGP2 126 aaKnown RBP10.57□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 PgpQ8CHP8 321 aa10.57□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Psmg3Q9CZH3 122 aa10.57□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Ighv1-69A0A0G2JFS5 117 aa10.56□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Olfr1326-ps1A0A140T8J7 311 aa10.56□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 LfngO09010 378 aa10.56□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Ren1P06281 402 aa10.56□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Ccl1P10146 92 aa10.56□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Gstp1P19157 210 aa10.56□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Hes1P35428 282 aa10.56□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Fabp6P51162 128 aa10.56□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Saxo2Q8BQB6 394 aa10.56□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Arpc1aQ9R0Q6 370 aa10.56□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Vmn1r61W4VSP5 300 aa10.56□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Gm3512L7N206 146 aa10.55□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 P01748 117 aa10.55□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Tmem95P0DJF3 176 aa10.55□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Q497N7 227 aa10.55□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Bst1Q64277 311 aa10.55□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Olfr996Q7TRA0 314 aa10.55□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Gm12689Q8BQU9 117 aa10.55□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Mgst1Q91VS7 155 aa10.55□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Prss41Q920S2 322 aa10.55□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Mpv17lQ99MS3 194 aa10.55□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Tmem89Q9DA04 169 aa10.55□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Trav7-4A0A075B6C1 113 aa10.55□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 AU041133A0A0J9YVH3 498 aa10.55□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Lmo4P61969 165 aa10.55□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Trav7d-4Q5R1H9 113 aa10.55□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Duxbl2Q7TNE6 350 aa10.55□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Olfr403Q7TRX2 313 aa10.55□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Msrb3Q8BU85 253 aa10.55□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 F930015N05RikQ8C3A3 210 aa10.55□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Olfr1009Q8VFK1 314 aa10.55□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Tmem219Q9D123 240 aa10.55□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 EppinQ9DA01 134 aa10.55□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 HeylQ9DBX7 326 aa10.55□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Itpr1P11881 2749 aa10.54□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 IgipA0A1B0GR74 53 aa10.54□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Tex54G3UW99 86 aa10.54□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Gm21874J3QNZ6 232 aa10.54□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Gm4133K9J7G6 307 aa10.54□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 TcapO70548 167 aa10.54□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Cldn1O88551 211 aa10.54□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Zfand3Q497H0 227 aa10.54□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 H2al1nQ497L1 109 aa10.54□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Olfr433Q7TRV9 314 aa10.54□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Q8CF25 301 aa10.54□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Oraov1Q8CH62 137 aa10.54□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Sptbn2Q68FG2 2388 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Igkv4-57A0A0A6YYE7 117 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Olfr1436A0PK57 315 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Gm6970F7DCP6 221 aa10.53□□□□□ -0.72
Pdlim5-208ENSMUST00000196220 Gm5294J3QP53 216 aa10.53□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 37.4 ms