Protein–RNA interactions for Protein: O88796

Rpp30, Ribonuclease P protein subunit p30, mousemouse

Known RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp30O88796 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Rpp30O88796 Gm25239-201ENSMUST00000174915 86 ntBASIC26.01■■□□□ 1.75
Rpp30O88796 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
Rpp30O88796 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Rpp30O88796 Psd-208ENSMUST00000224556 2034 ntBASIC24.86■■□□□ 1.57
Rpp30O88796 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rpp30O88796 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rpp30O88796 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rpp30O88796 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rpp30O88796 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rpp30O88796 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rpp30O88796 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rpp30O88796 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rpp30O88796 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Rpp30O88796 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Rpp30O88796 Gm15042-201ENSMUST00000120212 883 ntBASIC23.59■■□□□ 1.37
Rpp30O88796 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.57■■□□□ 1.36
Rpp30O88796 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rpp30O88796 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rpp30O88796 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rpp30O88796 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rpp30O88796 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rpp30O88796 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rpp30O88796 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rpp30O88796 Gm15045-201ENSMUST00000117359 883 ntBASIC23.11■■□□□ 1.29
Rpp30O88796 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Rpp30O88796 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
Rpp30O88796 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rpp30O88796 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Rpp30O88796 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rpp30O88796 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rpp30O88796 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.82■■□□□ 1.24
Rpp30O88796 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rpp30O88796 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.8■■□□□ 1.24
Rpp30O88796 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rpp30O88796 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rpp30O88796 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rpp30O88796 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.74■■□□□ 1.23
Rpp30O88796 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rpp30O88796 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.63■■□□□ 1.21
Rpp30O88796 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rpp30O88796 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rpp30O88796 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rpp30O88796 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rpp30O88796 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rpp30O88796 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.48■■□□□ 1.19
Rpp30O88796 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Rpp30O88796 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.29■■□□□ 1.16
Rpp30O88796 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rpp30O88796 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.24■■□□□ 1.15
Rpp30O88796 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rpp30O88796 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rpp30O88796 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rpp30O88796 Gm24109-201ENSMUST00000175489 103 ntBASIC22.1■■□□□ 1.13
Rpp30O88796 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Rpp30O88796 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rpp30O88796 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rpp30O88796 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rpp30O88796 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Rpp30O88796 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22■■□□□ 1.11
Rpp30O88796 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rpp30O88796 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rpp30O88796 Gm23366-201ENSMUST00000175022 89 ntBASIC21.93■■□□□ 1.1
Rpp30O88796 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rpp30O88796 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rpp30O88796 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rpp30O88796 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.9■■□□□ 1.1
Rpp30O88796 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rpp30O88796 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rpp30O88796 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rpp30O88796 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rpp30O88796 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rpp30O88796 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rpp30O88796 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rpp30O88796 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rpp30O88796 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Rpp30O88796 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.69■■□□□ 1.06
Rpp30O88796 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rpp30O88796 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rpp30O88796 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Rpp30O88796 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rpp30O88796 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rpp30O88796 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpp30O88796 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Rpp30O88796 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rpp30O88796 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Rpp30O88796 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.51■■□□□ 1.03
Rpp30O88796 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rpp30O88796 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Rpp30O88796 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rpp30O88796 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Rpp30O88796 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rpp30O88796 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Rpp30O88796 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
Rpp30O88796 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rpp30O88796 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rpp30O88796 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rpp30O88796 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Rpp30O88796 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rpp30O88796 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms