RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 TMEM229BQ8BFQ2 167 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Mef2cQ8CFN5 474 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Pygo1Q9D0P5 417 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Hint2Q9D0S9 163 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 9130008F23RikQ9D2Z6 181 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Olfr959Q9EQ86 311 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Prss1Q9Z1R9 246 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Pkd1l1Q8R526 2615 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Gm20767O70517 169 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 P04942 107 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Hist1h1eP43274 219 aaKnown RBP6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 PpoxP51175 477 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Smrp1Q2MH31 260 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Olfr688Q6W049 321 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 CdsnQ7TPC1 561 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Olfr1454Q8VFW2 307 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Megf8P60882 2789 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Trav13n-4A0A0G2JG01 110 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Gm3512L7N206 146 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Gfi1bO70237 330 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Fut9O88819 359 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Foxa3P35584 353 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Olfr823Q7TRH2 315 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Olfr480Q8VEZ0 312 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Olfr1279Q8VF38 313 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Tmem167aQ9CR64 72 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Rbmxl2Q9DAE2 385 aaKnown RBP6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Prss21Q9JHJ7 324 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Igkv4-57A0A0A6YYE7 117 aa6.59□□□□□ -1.35
Trim39-205ENSMUST00000173369 Zfp979A2A799 407 aa6.59□□□□□ -1.35
Trim39-205ENSMUST00000173369 Smim20D3Z7Q2 69 aa6.59□□□□□ -1.35
Trim39-205ENSMUST00000173369 Gm5218F6YH22 154 aa6.59□□□□□ -1.35
Trim39-205ENSMUST00000173369 Vmn1r204I7HIK1 302 aa6.59□□□□□ -1.35
Trim39-205ENSMUST00000173369 Gm21767J3QPV5 180 aa6.59□□□□□ -1.35
Trim39-205ENSMUST00000173369 Ly86O88188 162 aa6.59□□□□□ -1.35
Trim39-205ENSMUST00000173369 P04943 107 aa6.59□□□□□ -1.35
Trim39-205ENSMUST00000173369 Tdgf1P51865 171 aa6.59□□□□□ -1.35
Trim39-205ENSMUST00000173369 Morn2Q6UL01 79 aa6.59□□□□□ -1.35
Trim39-205ENSMUST00000173369 Defb10Q8R2I8 73 aa6.59□□□□□ -1.35
Trim39-205ENSMUST00000173369 Fbxo36Q9CQ24 188 aa6.59□□□□□ -1.35
Trim39-205ENSMUST00000173369 Malsu1Q9CWV0 228 aa6.59□□□□□ -1.35
Trim39-205ENSMUST00000173369 PpbpQ9EQI5 113 aa6.59□□□□□ -1.35
Trim39-205ENSMUST00000173369 Rnd2Q9QYM5 227 aa6.59□□□□□ -1.35
Trim39-205ENSMUST00000173369 Zfp53Q9Z117 652 aa6.59□□□□□ -1.35
Trim39-205ENSMUST00000173369 Zfp980A2A9J5 645 aa6.59□□□□□ -1.36
Trim39-205ENSMUST00000173369 BC030500E9Q6W0 185 aa6.59□□□□□ -1.36
Trim39-205ENSMUST00000173369 Scgb2a2J3KMP9 96 aa6.59□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gm21834J3QN05 151 aa6.59□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr467L7N455 308 aa6.59□□□□□ -1.36
Trim39-205ENSMUST00000173369 Id3P41133 119 aa6.59□□□□□ -1.36
Trim39-205ENSMUST00000173369 Cd300lbQ3U497 209 aa6.59□□□□□ -1.36
Trim39-205ENSMUST00000173369 Trav2Q5R1I9 109 aa6.59□□□□□ -1.36
Trim39-205ENSMUST00000173369 TprkbQ8QZZ7 175 aa6.59□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr1199Q8VF94 310 aa6.59□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr124Q8VGW6 315 aa6.59□□□□□ -1.36
Trim39-205ENSMUST00000173369 Cds2Q99L43 444 aa6.59□□□□□ -1.36
Trim39-205ENSMUST00000173369 Pam16Q9CQV1 125 aa6.59□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gm4565A0A140LJ87 301 aa6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 OdamA1E960 273 aa6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gm17430F6RSK3 157 aa6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gm20830J3KML6 227 aa6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gm21882J3QN86 361 aa6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 Hist1h1aP43275 213 aa6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 Defa11P50709 85 aa6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 Psg27Q497W2 474 aa6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 Il31Q6EAL8 163 aa6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr923Q7TRB9 317 aa6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 Eif5a2Q8BGY2 153 aaKnown RBP6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 Fam216bQ8CC14 138 aa6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr877Q8VF62 311 aa6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 Klk7Q91VE3 249 aa6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 Ssbp1Q9CYR0 152 aaKnown RBP6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 Naa60Q9DBU2 242 aa6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 Plp2Q9R1Q7 152 aa6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 FasnP19096 2504 aaKnown RBP6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr609E9Q4X7 319 aa6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 Tspan15F7BWT7 294 aa6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gm7137J3QMW1 236 aa6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 Ear1P97426 155 aa6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr411Q7TRW8 315 aa6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 Ttc9cQ810A3 171 aa6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 Atp6v0e1Q9CQD8 81 aa6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 Fkbp11Q9D1M7 201 aa6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 CcsQ9WU84 274 aa6.58□□□□□ -1.36
Trim39-205ENSMUST00000173369 Rpl23a-ps3A0A140T8M7 156 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gm36176A0A1W2P8D5 158 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Rsg1A2A825 258 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Scgb1b30A2BH64 92 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Ankrd66J3QNN4 192 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 BatfO35284 125 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Lin7cO88952 197 aaKnown RBP6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Iglc3P01845 104 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Rpl23aP62751 156 aaKnown RBP6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Hist1h1tQ07133 208 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gata4Q08369 441 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Slc25a29Q8BL03 306 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Vmn1r37Q8R2E4 302 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Sft2d2Q8VD57 159 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Csdc2Q91YQ3 154 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Mrpl27Q99N92 148 aa6.57□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 235.8 ms