Protein–RNA interactions for Protein: P35584

Foxa3, Hepatocyte nuclear factor 3-gamma, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa3P35584 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Foxa3P35584 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
Foxa3P35584 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Foxa3P35584 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Foxa3P35584 Psd-208ENSMUST00000224556 2034 ntBASIC27.53■■■□□ 2
Foxa3P35584 Gm25239-201ENSMUST00000174915 86 ntBASIC27.34■■□□□ 1.97
Foxa3P35584 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Foxa3P35584 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Foxa3P35584 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Foxa3P35584 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Foxa3P35584 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Foxa3P35584 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Foxa3P35584 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Foxa3P35584 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Foxa3P35584 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Foxa3P35584 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Foxa3P35584 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
Foxa3P35584 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Foxa3P35584 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.44■■□□□ 1.66
Foxa3P35584 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Foxa3P35584 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Foxa3P35584 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Foxa3P35584 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Foxa3P35584 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Foxa3P35584 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Foxa3P35584 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Foxa3P35584 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.96■■□□□ 1.59
Foxa3P35584 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.89■■□□□ 1.58
Foxa3P35584 Gm15042-201ENSMUST00000120212 883 ntBASIC24.86■■□□□ 1.57
Foxa3P35584 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Foxa3P35584 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Foxa3P35584 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.81■■□□□ 1.56
Foxa3P35584 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Foxa3P35584 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Foxa3P35584 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Foxa3P35584 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Foxa3P35584 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Foxa3P35584 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.55■■□□□ 1.52
Foxa3P35584 Gm15045-201ENSMUST00000117359 883 ntBASIC24.54■■□□□ 1.52
Foxa3P35584 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.54■■□□□ 1.52
Foxa3P35584 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Foxa3P35584 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.51■■□□□ 1.51
Foxa3P35584 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Foxa3P35584 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Foxa3P35584 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Foxa3P35584 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Foxa3P35584 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Foxa3P35584 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Foxa3P35584 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Foxa3P35584 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.22■■□□□ 1.47
Foxa3P35584 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Foxa3P35584 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Foxa3P35584 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.07■■□□□ 1.44
Foxa3P35584 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Foxa3P35584 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Foxa3P35584 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Foxa3P35584 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
Foxa3P35584 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Foxa3P35584 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Foxa3P35584 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Foxa3P35584 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Foxa3P35584 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Foxa3P35584 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Foxa3P35584 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Foxa3P35584 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Foxa3P35584 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Foxa3P35584 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.67■■□□□ 1.38
Foxa3P35584 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Foxa3P35584 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Foxa3P35584 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Foxa3P35584 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Foxa3P35584 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Foxa3P35584 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Foxa3P35584 Gm24109-201ENSMUST00000175489 103 ntBASIC23.47■■□□□ 1.35
Foxa3P35584 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Foxa3P35584 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.45■■□□□ 1.35
Foxa3P35584 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Foxa3P35584 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Foxa3P35584 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Foxa3P35584 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.39■■□□□ 1.33
Foxa3P35584 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Foxa3P35584 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Foxa3P35584 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Foxa3P35584 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Foxa3P35584 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Foxa3P35584 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Foxa3P35584 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.27■■□□□ 1.32
Foxa3P35584 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Foxa3P35584 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Foxa3P35584 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Foxa3P35584 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Foxa3P35584 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Foxa3P35584 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Foxa3P35584 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Foxa3P35584 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Foxa3P35584 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Foxa3P35584 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Foxa3P35584 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Foxa3P35584 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Foxa3P35584 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 195.2 ms