RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 HECTD4Q9Y4D8 3996 aa2.84□□□□□ -1.96
R3HDM1-220ENST00000628915 TRIOBPQ9H2D6 2365 aa2.84□□□□□ -1.96
R3HDM1-220ENST00000628915 ATP6V0E1O15342 81 aa2.84□□□□□ -1.96
R3HDM1-220ENST00000628915 MRPL33O75394 65 aaKnown RBP2.84□□□□□ -1.96
R3HDM1-220ENST00000628915 NDPQ00604 133 aa2.84□□□□□ -1.96
R3HDM1-220ENST00000628915 FBN2P35556 2912 aa2.83□□□□□ -1.96
R3HDM1-220ENST00000628915 PTPRBP23467 1997 aa2.83□□□□□ -1.96
R3HDM1-220ENST00000628915 IGHV3-20A0A0C4DH32 117 aa2.83□□□□□ -1.96
R3HDM1-220ENST00000628915 LOC100996750A0A140TA64 210 aa2.83□□□□□ -1.96
R3HDM1-220ENST00000628915 C19orf84I3L1E1 186 aa2.83□□□□□ -1.96
R3HDM1-220ENST00000628915 Q1T7F1 81 aa2.83□□□□□ -1.96
R3HDM1-220ENST00000628915 KRTAP4-6Q9BYQ5 205 aa2.83□□□□□ -1.96
R3HDM1-220ENST00000628915 hDV103S1A0JD37 113 aa2.83□□□□□ -1.96
R3HDM1-220ENST00000628915 C10orf142B7Z368 130 aa2.83□□□□□ -1.96
R3HDM1-220ENST00000628915 F8W735 103 aaPredicted RBP2.83□□□□□ -1.96
R3HDM1-220ENST00000628915 FSTL3O95633 263 aa2.83□□□□□ -1.96
R3HDM1-220ENST00000628915 IGHV3-9P01782 118 aa2.83□□□□□ -1.96
R3HDM1-220ENST00000628915 RPL39P5Q59GN2 51 aa2.83□□□□□ -1.96
R3HDM1-220ENST00000628915 TMEM254Q8TBM7 123 aa2.83□□□□□ -1.96
R3HDM1-220ENST00000628915 SMCR5Q8TEV8 140 aa2.83□□□□□ -1.96
R3HDM1-220ENST00000628915 CYP4F30PQ9H0H9 118 aa2.83□□□□□ -1.96
R3HDM1-220ENST00000628915 PCNX2A6NKB5 2137 aa2.83□□□□□ -1.96
R3HDM1-220ENST00000628915 CACNA1EQ15878 2313 aa2.83□□□□□ -1.96
R3HDM1-220ENST00000628915 E7EUB6 86 aa2.83□□□□□ -1.96
R3HDM1-220ENST00000628915 IGLV2-11P01706 119 aa2.83□□□□□ -1.96
R3HDM1-220ENST00000628915 IGHV3-30P01768 117 aa2.83□□□□□ -1.96
R3HDM1-220ENST00000628915 IGHV3-30-5P0DP03 117 aa2.83□□□□□ -1.96
R3HDM1-220ENST00000628915 FBXL19-AS1Q494R0 122 aa2.83□□□□□ -1.96
R3HDM1-220ENST00000628915 A0A0J9YY99 117 aa2.82□□□□□ -1.96
R3HDM1-220ENST00000628915 IBA57-AS1B1ANH7 110 aa2.82□□□□□ -1.96
R3HDM1-220ENST00000628915 LY6HO94772 140 aa2.82□□□□□ -1.96
R3HDM1-220ENST00000628915 PPP1R17O96001 155 aa2.82□□□□□ -1.96
R3HDM1-220ENST00000628915 VMO1Q7Z5L0 202 aa2.82□□□□□ -1.96
R3HDM1-220ENST00000628915 CNEP1R1Q8N9A8 125 aa2.82□□□□□ -1.96
R3HDM1-220ENST00000628915 ZNRF1Q8ND25 227 aa2.82□□□□□ -1.96
R3HDM1-220ENST00000628915 RNASE1P07998 156 aaKnown RBP2.82□□□□□ -1.96
R3HDM1-220ENST00000628915 PRR3P79522 188 aaKnown RBP2.82□□□□□ -1.96
R3HDM1-220ENST00000628915 IMMP1LQ96LU5 166 aa2.82□□□□□ -1.96
R3HDM1-220ENST00000628915 C14orf132Q9NPU4 83 aa2.82□□□□□ -1.96
R3HDM1-220ENST00000628915 NDUFA4L2Q9NRX3 87 aa2.82□□□□□ -1.96
R3HDM1-220ENST00000628915 CNFNQ9BYD5 112 aa2.82□□□□□ -1.96
R3HDM1-220ENST00000628915 LRBAP50851 2863 aa2.82□□□□□ -1.96
R3HDM1-220ENST00000628915 SPTY2D1-AS1A0A0U1RR47 76 aa2.82□□□□□ -1.96
R3HDM1-220ENST00000628915 TSPEAR-AS2P59090 65 aa2.82□□□□□ -1.96
R3HDM1-220ENST00000628915 KLHL30-AS1Q8NEE0 82 aa2.82□□□□□ -1.96
R3HDM1-220ENST00000628915 RNF185Q96GF1 192 aa2.82□□□□□ -1.96
R3HDM1-220ENST00000628915 ZNF71Q9NQZ8 489 aaPredicted RBP2.82□□□□□ -1.96
R3HDM1-220ENST00000628915 ADAMTS20P59510 1910 aa2.81□□□□□ -1.96
R3HDM1-220ENST00000628915 PCSK5Q92824 1860 aa2.81□□□□□ -1.96
R3HDM1-220ENST00000628915 IGLV3-12A0A075B6K2 115 aa2.81□□□□□ -1.96
R3HDM1-220ENST00000628915 IGLV5-45A0A087WSX0 123 aa2.81□□□□□ -1.96
R3HDM1-220ENST00000628915 COX6B1P14854 86 aa2.81□□□□□ -1.96
R3HDM1-220ENST00000628915 PRB3Q04118 309 aaPredicted RBP2.81□□□□□ -1.96
R3HDM1-220ENST00000628915 PDE6HQ13956 83 aa2.81□□□□□ -1.96
R3HDM1-220ENST00000628915 Q8N3U1 123 aa2.81□□□□□ -1.96
R3HDM1-220ENST00000628915 TMEM263Q8WUH6 116 aaKnown RBP2.81□□□□□ -1.96
R3HDM1-220ENST00000628915 PRAC1Q96KF2 57 aa2.81□□□□□ -1.96
R3HDM1-220ENST00000628915 UTP20O75691 2785 aaKnown RBP2.81□□□□□ -1.96
R3HDM1-220ENST00000628915 IGKV1D-37A0A075B6S9 117 aa2.81□□□□□ -1.96
R3HDM1-220ENST00000628915 IGLV2-18A0A075B6J9 118 aa2.81□□□□□ -1.96
R3HDM1-220ENST00000628915 IGHV1-69P01742 117 aa2.81□□□□□ -1.96
R3HDM1-220ENST00000628915 PLA2G1BP04054 148 aaKnown RBP2.81□□□□□ -1.96
R3HDM1-220ENST00000628915 SAA2P0DJI9 122 aaPredicted RBP2.81□□□□□ -1.96
R3HDM1-220ENST00000628915 LYZP61626 148 aa2.81□□□□□ -1.96
R3HDM1-220ENST00000628915 NREPQ16612 68 aa2.81□□□□□ -1.96
R3HDM1-220ENST00000628915 C1orf134Q5TEV5 83 aa2.81□□□□□ -1.96
R3HDM1-220ENST00000628915 Q6ZS46 218 aa2.81□□□□□ -1.96
R3HDM1-220ENST00000628915 ORMDL1Q9P0S3 153 aa2.81□□□□□ -1.96
R3HDM1-220ENST00000628915 IGKV3D-15A0A087WSY6 115 aa2.8□□□□□ -1.96
R3HDM1-220ENST00000628915 C16orf90A8MZG2 172 aa2.8□□□□□ -1.96
R3HDM1-220ENST00000628915 RPL28P46779 137 aaKnown RBP2.8□□□□□ -1.96
R3HDM1-220ENST00000628915 CRIP1P50238 77 aa2.8□□□□□ -1.96
R3HDM1-220ENST00000628915 ARFGEF3Q5TH69 2177 aa2.8□□□□□ -1.96
R3HDM1-220ENST00000628915 ZNF503-AS2A6NEH8 195 aa2.8□□□□□ -1.96
R3HDM1-220ENST00000628915 KLLNB2CW77 178 aa2.8□□□□□ -1.96
R3HDM1-220ENST00000628915 IGHV3-13P01766 116 aa2.8□□□□□ -1.96
R3HDM1-220ENST00000628915 FAM229BQ4G0N7 80 aa2.8□□□□□ -1.96
R3HDM1-220ENST00000628915 SMIM2Q9BVW6 85 aa2.8□□□□□ -1.96
R3HDM1-220ENST00000628915 MSRB1Q9NZV6 116 aa2.8□□□□□ -1.96
R3HDM1-220ENST00000628915 CEP192Q8TEP8 1941 aa2.8□□□□□ -1.96
R3HDM1-220ENST00000628915 IGHV1-3A0A0C4DH29 117 aa2.8□□□□□ -1.96
R3HDM1-220ENST00000628915 TMEM167AQ8TBQ9 72 aa2.8□□□□□ -1.96
R3HDM1-220ENST00000628915 C11orf86A6NJI1 115 aa2.79□□□□□ -1.96
R3HDM1-220ENST00000628915 I3L3M4 83 aa2.79□□□□□ -1.96
R3HDM1-220ENST00000628915 IGLV1-40P01703 118 aa2.79□□□□□ -1.96
R3HDM1-220ENST00000628915 CMC4P56277 68 aaPredicted RBP2.79□□□□□ -1.96
R3HDM1-220ENST00000628915 FAM218AQ96MZ4 157 aa2.79□□□□□ -1.96
R3HDM1-220ENST00000628915 CDC42SE1Q9NRR8 79 aa2.79□□□□□ -1.96
R3HDM1-220ENST00000628915 C19orf73Q9NVV2 129 aa2.79□□□□□ -1.96
R3HDM1-220ENST00000628915 RYR3Q15413 4870 aa2.79□□□□□ -1.96
R3HDM1-220ENST00000628915 FAT3Q8TDW7 4589 aa2.79□□□□□ -1.96
R3HDM1-220ENST00000628915 ABCA1O95477 2261 aa2.79□□□□□ -1.96
R3HDM1-220ENST00000628915 FSHBP01225 129 aa2.79□□□□□ -1.96
R3HDM1-220ENST00000628915 IGHV3-48P01763 117 aa2.79□□□□□ -1.96
R3HDM1-220ENST00000628915 SPINK2P20155 84 aa2.79□□□□□ -1.96
R3HDM1-220ENST00000628915 LINC00846Q9NV44 126 aa2.79□□□□□ -1.96
R3HDM1-220ENST00000628915 CFAP46Q8IYW2 2715 aa2.79□□□□□ -1.96
R3HDM1-220ENST00000628915 TRBV6-8A0A0A6YYG3 113 aa2.79□□□□□ -1.96
R3HDM1-220ENST00000628915 CCL3P10147 92 aa2.79□□□□□ -1.96
R3HDM1-220ENST00000628915 SPTBN2O15020 2390 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms