RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 DEFB136Q30KP8 78 aa10.13□□□□□ -0.79
UBE3A-209ENST00000625778 FAM104AQ969W3 186 aa10.12□□□□□ -0.79
UBE3A-209ENST00000625778 C1orf43Q9BWL3 253 aa10.12□□□□□ -0.79
UBE3A-209ENST00000625778 CYSTM1Q9H1C7 97 aa10.12□□□□□ -0.79
UBE3A-209ENST00000625778 ACACBO00763 2458 aa10.12□□□□□ -0.79
UBE3A-209ENST00000625778 IGKV3D-7A0A0C4DH55 119 aa10.12□□□□□ -0.79
UBE3A-209ENST00000625778 IGKV3OR2-268A0A0C4DH90 116 aa10.12□□□□□ -0.79
UBE3A-209ENST00000625778 A6NDX4 124 aa10.12□□□□□ -0.79
UBE3A-209ENST00000625778 IGHV4-59P01825 116 aa10.12□□□□□ -0.79
UBE3A-209ENST00000625778 KHDC1LQ5JSQ8 128 aa10.12□□□□□ -0.79
UBE3A-209ENST00000625778 ITPR1Q14643 2758 aa10.11□□□□□ -0.79
UBE3A-209ENST00000625778 CIRBPQ14011 172 aaKnown RBP10.11□□□□□ -0.79
UBE3A-209ENST00000625778 MAPK1IP1LQ8NDC0 245 aa10.11□□□□□ -0.79
UBE3A-209ENST00000625778 IGHV3-53P01767 116 aa10.11□□□□□ -0.79
UBE3A-209ENST00000625778 C10orf105Q8TEF2 133 aa10.11□□□□□ -0.79
UBE3A-209ENST00000625778 SONP18583 2426 aaKnown RBP10.11□□□□□ -0.79
UBE3A-209ENST00000625778 K7EQG2 157 aa10.11□□□□□ -0.79
UBE3A-209ENST00000625778 SPANXDQ9BXN6 97 aa10.11□□□□□ -0.79
UBE3A-209ENST00000625778 SPANXCQ9NY87 97 aa10.11□□□□□ -0.79
UBE3A-209ENST00000625778 COX6A2Q02221 97 aa10.1□□□□□ -0.79
UBE3A-209ENST00000625778 Q8N2B8 174 aa10.1□□□□□ -0.79
UBE3A-209ENST00000625778 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.1□□□□□ -0.79
UBE3A-209ENST00000625778 Q9HAA7 133 aa10.1□□□□□ -0.79
UBE3A-209ENST00000625778 UTP20O75691 2785 aaKnown RBP10.1□□□□□ -0.79
UBE3A-209ENST00000625778 IGLV1-40P01703 118 aa10.1□□□□□ -0.79
UBE3A-209ENST00000625778 Q6Q795 121 aa10.1□□□□□ -0.79
UBE3A-209ENST00000625778 SDIM1Q6ZPB5 146 aa10.1□□□□□ -0.79
UBE3A-209ENST00000625778 PIMREGQ9BSJ6 248 aa10.1□□□□□ -0.79
UBE3A-209ENST00000625778 UBE2D4Q9Y2X8 147 aa10.1□□□□□ -0.79
UBE3A-209ENST00000625778 AVPP01185 164 aa10.09□□□□□ -0.79
UBE3A-209ENST00000625778 CFHR3Q02985 330 aa10.09□□□□□ -0.79
UBE3A-209ENST00000625778 PRIMA1Q86XR5 153 aa10.09□□□□□ -0.79
UBE3A-209ENST00000625778 IGHV4-30-2A0A087WSY4 118 aa10.09□□□□□ -0.79
UBE3A-209ENST00000625778 TINCRA0A1B0GVN0 87 aa10.09□□□□□ -0.79
UBE3A-209ENST00000625778 H3BUA1 57 aa10.09□□□□□ -0.79
UBE3A-209ENST00000625778 CITED2Q99967 270 aaPredicted RBP10.09□□□□□ -0.79
UBE3A-209ENST00000625778 CHCHD7Q9BUK0 85 aa10.09□□□□□ -0.79
UBE3A-209ENST00000625778 MYO18BQ8IUG5 2567 aa10.09□□□□□ -0.79
UBE3A-209ENST00000625778 DAZ2Q13117 558 aaKnown RBP10.08□□□□□ -0.8
UBE3A-209ENST00000625778 DAZ4Q86SG3 579 aaKnown RBP10.08□□□□□ -0.8
UBE3A-209ENST00000625778 DAZ3Q9NR90 486 aaKnown RBP10.08□□□□□ -0.8
UBE3A-209ENST00000625778 K7EMT4 169 aa10.08□□□□□ -0.8
UBE3A-209ENST00000625778 PIK3CD-AS1Q5SR53 167 aa10.08□□□□□ -0.8
UBE3A-209ENST00000625778 LINC00308Q8TCZ7 52 aa10.08□□□□□ -0.8
UBE3A-209ENST00000625778 A0A087WVE0 104 aa10.07□□□□□ -0.8
UBE3A-209ENST00000625778 PYGO1Q9Y3Y4 419 aa10.07□□□□□ -0.8
UBE3A-209ENST00000625778 TRACP01848 142 aa10.07□□□□□ -0.8
UBE3A-209ENST00000625778 SMCR5Q8TEV8 140 aa10.07□□□□□ -0.8
UBE3A-209ENST00000625778 FLNCQ14315 2725 aa10.07□□□□□ -0.8
UBE3A-209ENST00000625778 UQCRQO14949 82 aa10.07□□□□□ -0.8
UBE3A-209ENST00000625778 BAALC-AS2P0C853 105 aa10.07□□□□□ -0.8
UBE3A-209ENST00000625778 TOMM7Q9P0U1 55 aa10.07□□□□□ -0.8
UBE3A-209ENST00000625778 A0A1B0GX51 115 aa10.06□□□□□ -0.8
UBE3A-209ENST00000625778 SLURP1P55000 103 aa10.06□□□□□ -0.8
UBE3A-209ENST00000625778 C18orf65Q6ZTR6 163 aa10.06□□□□□ -0.8
UBE3A-209ENST00000625778 CCL19Q99731 98 aa10.06□□□□□ -0.8
UBE3A-209ENST00000625778 EPG5Q9HCE0 2579 aa10.05□□□□□ -0.8
UBE3A-209ENST00000625778 UBE2E2Q96LR5 201 aa10.05□□□□□ -0.8
UBE3A-209ENST00000625778 SPANXA1Q9NS26 97 aa10.05□□□□□ -0.8
UBE3A-209ENST00000625778 DEFB112Q30KQ8 113 aa10.05□□□□□ -0.8
UBE3A-209ENST00000625778 PSMB8P28062 276 aa10.05□□□□□ -0.8
UBE3A-209ENST00000625778 SOSTDC1Q6X4U4 206 aa10.05□□□□□ -0.8
UBE3A-209ENST00000625778 XCL2Q9UBD3 114 aa10.05□□□□□ -0.8
UBE3A-209ENST00000625778 MSMBP08118 114 aa10.03□□□□□ -0.8
UBE3A-209ENST00000625778 HIST1H4AP62805 103 aaKnown RBP10.03□□□□□ -0.8
UBE3A-209ENST00000625778 A0A0U1RQV1 116 aa10.03□□□□□ -0.8
UBE3A-209ENST00000625778 COX7A2LO14548 114 aa10.03□□□□□ -0.8
UBE3A-209ENST00000625778 ZNF415Q09FC8 603 aa10.03□□□□□ -0.8
UBE3A-209ENST00000625778 CHD6Q8TD26 2715 aa10.03□□□□□ -0.8
UBE3A-209ENST00000625778 NAV2Q8IVL1 2488 aa10.03□□□□□ -0.8
UBE3A-209ENST00000625778 TRGV1A0A0A0MS02 117 aa10.03□□□□□ -0.8
UBE3A-209ENST00000625778 RBMY1BA6NDE4 496 aaKnown RBP10.03□□□□□ -0.8
UBE3A-209ENST00000625778 RBMY1EA6NEQ0 496 aaKnown RBP10.03□□□□□ -0.8
UBE3A-209ENST00000625778 NDUFA1O15239 70 aa10.03□□□□□ -0.8
UBE3A-209ENST00000625778 RBMY1DP0C7P1 496 aaKnown RBP10.03□□□□□ -0.8
UBE3A-209ENST00000625778 GNLYP22749 145 aa10.02□□□□□ -0.81
UBE3A-209ENST00000625778 FAM218AQ96MZ4 157 aa10.02□□□□□ -0.81
UBE3A-209ENST00000625778 ABCA12Q86UK0 2595 aa10.02□□□□□ -0.81
UBE3A-209ENST00000625778 FBN2P35556 2912 aa10.02□□□□□ -0.81
UBE3A-209ENST00000625778 PRB1P04280 392 aa10.01□□□□□ -0.81
UBE3A-209ENST00000625778 CCDC168Q8NDH2 2452 aa10.01□□□□□ -0.81
UBE3A-209ENST00000625778 FN1P02751 2386 aaKnown RBP10.01□□□□□ -0.81
UBE3A-209ENST00000625778 FAM240AA0A1B0GVK7 77 aa10.01□□□□□ -0.81
UBE3A-209ENST00000625778 MXRA5Q9NR99 2828 aa10.01□□□□□ -0.81
UBE3A-209ENST00000625778 LINC00242Q5T6M2 205 aa10.01□□□□□ -0.81
UBE3A-209ENST00000625778 LINC00526Q96FQ7 95 aa10.01□□□□□ -0.81
UBE3A-209ENST00000625778 TIRAPP58753 221 aa10□□□□□ -0.81
UBE3A-209ENST00000625778 LRRC75A-AS1Q8N1F1 130 aa10□□□□□ -0.81
UBE3A-209ENST00000625778 WFDC11Q8NEX6 87 aa10□□□□□ -0.81
UBE3A-209ENST00000625778 C11orf68Q9H3H3 251 aaKnown RBP10□□□□□ -0.81
UBE3A-209ENST00000625778 TRBV7-7A0A0K0K1E9 115 aa9.99□□□□□ -0.81
UBE3A-209ENST00000625778 COX7CP15954 63 aa9.99□□□□□ -0.81
UBE3A-209ENST00000625778 C11orf44Q8N8P7 122 aa9.99□□□□□ -0.81
UBE3A-209ENST00000625778 NIPBLQ6KC79 2804 aaeCLIP9.99□□□□□ -0.818e-8■■■■■ 41.9
UBE3A-209ENST00000625778 OXTP01178 125 aa9.99□□□□□ -0.81
UBE3A-209ENST00000625778 ATP5G1P05496 136 aa9.99□□□□□ -0.81
UBE3A-209ENST00000625778 WFDC9Q8NEX5 89 aa9.99□□□□□ -0.81
UBE3A-209ENST00000625778 DYNLRB2Q8TF09 96 aa9.99□□□□□ -0.81
UBE3A-209ENST00000625778 LRRK2Q5S007 2527 aa9.98□□□□□ -0.81
UBE3A-209ENST00000625778 DNAL4O96015 105 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms