RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 EDN2P20800 178 aa9.17□□□□□ -0.94
CDH1-212ENST00000611625 C3orf56Q8N813 242 aa9.17□□□□□ -0.94
CDH1-212ENST00000611625 ZNF702PQ9H963 129 aa9.17□□□□□ -0.94
CDH1-212ENST00000611625 SPTBN4Q9H254 2564 aa9.16□□□□□ -0.94
CDH1-212ENST00000611625 SPART-AS1P0CW21 52 aa9.16□□□□□ -0.94
CDH1-212ENST00000611625 AVPP01185 164 aa9.16□□□□□ -0.94
CDH1-212ENST00000611625 SPATA25Q9BR10 227 aa9.16□□□□□ -0.94
CDH1-212ENST00000611625 PRO0255Q9UI72 69 aa9.16□□□□□ -0.94
CDH1-212ENST00000611625 CXCL5P42830 114 aa9.15□□□□□ -0.94
CDH1-212ENST00000611625 DEFB121Q5J5C9 76 aa9.15□□□□□ -0.94
CDH1-212ENST00000611625 LINC00643Q86TS7 51 aa9.15□□□□□ -0.94
CDH1-212ENST00000611625 ATOX1O00244 68 aa9.15□□□□□ -0.94
CDH1-212ENST00000611625 PRM2P04554 102 aa9.15□□□□□ -0.94
CDH1-212ENST00000611625 DEFB135Q30KP9 77 aa9.15□□□□□ -0.95
CDH1-212ENST00000611625 UBE2D1P51668 147 aa9.14□□□□□ -0.95
CDH1-212ENST00000611625 UBE2DNLQ8IWF7 75 aa9.14□□□□□ -0.95
CDH1-212ENST00000611625 IGLV4-69A0A075B6H9 119 aa9.14□□□□□ -0.95
CDH1-212ENST00000611625 Q6ZSV7 163 aa9.14□□□□□ -0.95
CDH1-212ENST00000611625 ABCA12Q86UK0 2595 aa9.14□□□□□ -0.95
CDH1-212ENST00000611625 DEFB4AO15263 64 aa9.14□□□□□ -0.95
CDH1-212ENST00000611625 NDUFV3P56181 108 aaKnown RBP9.14□□□□□ -0.95
CDH1-212ENST00000611625 LRRC75A-AS1Q8N1F1 130 aa9.14□□□□□ -0.95
CDH1-212ENST00000611625 UBE2D4Q9Y2X8 147 aa9.14□□□□□ -0.95
CDH1-212ENST00000611625 PCSK5Q92824 1860 aa9.14□□□□□ -0.95
CDH1-212ENST00000611625 TIMM17BO60830 172 aa9.14□□□□□ -0.95
CDH1-212ENST00000611625 A0A1B0GX51 115 aa9.13□□□□□ -0.95
CDH1-212ENST00000611625 JMJD7-PLA2G4BH0Y9G9 81 aa9.13□□□□□ -0.95
CDH1-212ENST00000611625 PSCAO43653 123 aa9.13□□□□□ -0.95
CDH1-212ENST00000611625 SPAG11BQ08648 103 aa9.13□□□□□ -0.95
CDH1-212ENST00000611625 PIK3CD-AS1Q5SR53 167 aa9.13□□□□□ -0.95
CDH1-212ENST00000611625 CAMK2N2Q96S95 79 aa9.13□□□□□ -0.95
CDH1-212ENST00000611625 MRPS36P82909 103 aaKnown RBP9.13□□□□□ -0.95
CDH1-212ENST00000611625 RBMY1FQ15415 496 aaKnown RBP9.13□□□□□ -0.95
CDH1-212ENST00000611625 C18orf65Q6ZTR6 163 aa9.13□□□□□ -0.95
CDH1-212ENST00000611625 CHD9Q3L8U1 2897 aa9.13□□□□□ -0.95
CDH1-212ENST00000611625 IGKV2D-24A0A075B6R9 120 aa9.12□□□□□ -0.95
CDH1-212ENST00000611625 NCR3O14931 201 aa9.12□□□□□ -0.95
CDH1-212ENST00000611625 AGRNO00468 2067 aa9.12□□□□□ -0.95
CDH1-212ENST00000611625 C14orf132Q9NPU4 83 aa9.12□□□□□ -0.95
CDH1-212ENST00000611625 PRRC2AP48634 2157 aaKnown RBP9.12□□□□□ -0.95
CDH1-212ENST00000611625 TSPEAR-AS2P59090 65 aa9.11□□□□□ -0.95
CDH1-212ENST00000611625 C1orf43Q9BWL3 253 aa9.11□□□□□ -0.95
CDH1-212ENST00000611625 PTPRBP23467 1997 aa9.11□□□□□ -0.95
CDH1-212ENST00000611625 H7C423 109 aa9.11□□□□□ -0.95
CDH1-212ENST00000611625 BRI3O95415 125 aa9.11□□□□□ -0.95
CDH1-212ENST00000611625 XGP55808 180 aa9.11□□□□□ -0.95
CDH1-212ENST00000611625 WFDC11Q8NEX6 87 aa9.1□□□□□ -0.95
CDH1-212ENST00000611625 LST1O00453 97 aa9.1□□□□□ -0.95
CDH1-212ENST00000611625 KLK12Q9UKR0 248 aa9.1□□□□□ -0.95
CDH1-212ENST00000611625 TRBV6-4A0A1B0GX49 114 aa9.1□□□□□ -0.95
CDH1-212ENST00000611625 IBA57-AS1B1ANH7 110 aa9.09□□□□□ -0.95
CDH1-212ENST00000611625 TRBV6-8A0A0A6YYG3 113 aa9.09□□□□□ -0.95
CDH1-212ENST00000611625 UBE2D3P61077 147 aa9.08□□□□□ -0.96
CDH1-212ENST00000611625 UBE2D2P62837 147 aa9.08□□□□□ -0.96
CDH1-212ENST00000611625 A0A0C4DFX4 3053 aa9.08□□□□□ -0.96
CDH1-212ENST00000611625 TMEM256-PLSCR3K7ERE1 68 aa9.08□□□□□ -0.96
CDH1-212ENST00000611625 POM121L12Q8N7R1 296 aa9.08□□□□□ -0.96
CDH1-212ENST00000611625 LINC00269Q8N2A0 174 aa9.08□□□□□ -0.96
CDH1-212ENST00000611625 RMI2Q96E14 147 aa9.07□□□□□ -0.96
CDH1-212ENST00000611625 FAM222AQ5U5X8 452 aa9.07□□□□□ -0.96
CDH1-212ENST00000611625 LINC01546A6NGU7 62 aa9.07□□□□□ -0.96
CDH1-212ENST00000611625 RBM3P98179 157 aaKnown RBP9.06□□□□□ -0.96
CDH1-212ENST00000611625 DEFB105AQ8NG35 78 aa9.05□□□□□ -0.96
CDH1-212ENST00000611625 RANBP2P49792 3224 aaKnown RBP9.05□□□□□ -0.96
CDH1-212ENST00000611625 FN1P02751 2386 aaKnown RBP9.05□□□□□ -0.96
CDH1-212ENST00000611625 DIRC1Q969H9 104 aa9.05□□□□□ -0.96
CDH1-212ENST00000611625 REG3AQ06141 175 aa9.05□□□□□ -0.96
CDH1-212ENST00000611625 CHCHD10Q8WYQ3 142 aaPredicted RBP9.04□□□□□ -0.96
CDH1-212ENST00000611625 ZNF580Q9UK33 172 aa9.04□□□□□ -0.96
CDH1-212ENST00000611625 KIF25-AS1Q9Y6Z4 181 aa9.04□□□□□ -0.96
CDH1-212ENST00000611625 H3BQ85 93 aa9.04□□□□□ -0.96
CDH1-212ENST00000611625 LINC00242Q5T6M2 205 aa9.04□□□□□ -0.96
CDH1-212ENST00000611625 WFDC10AQ9H1F0 79 aa9.04□□□□□ -0.96
CDH1-212ENST00000611625 LRRK2Q5S007 2527 aa9.04□□□□□ -0.96
CDH1-212ENST00000611625 LOC100131303A0A0U1RQF7 123 aa9.04□□□□□ -0.96
CDH1-212ENST00000611625 SMIM9A6NGZ8 99 aa9.04□□□□□ -0.96
CDH1-212ENST00000611625 RPL18AQ02543 176 aaKnown RBP9.04□□□□□ -0.96
CDH1-212ENST00000611625 ODF3L2Q3SX64 289 aa9.04□□□□□ -0.96
CDH1-212ENST00000611625 SLPIP03973 132 aa9.03□□□□□ -0.96
CDH1-212ENST00000611625 AMELXQ99217 191 aa9.03□□□□□ -0.96
CDH1-212ENST00000611625 CHCHD7Q9BUK0 85 aa9.03□□□□□ -0.96
CDH1-212ENST00000611625 LYRM9A8MSI8 78 aa9.03□□□□□ -0.96
CDH1-212ENST00000611625 CDC42SE2Q9NRR3 84 aa9.03□□□□□ -0.96
CDH1-212ENST00000611625 hADV29S1A0JD25 119 aa9.02□□□□□ -0.96
CDH1-212ENST00000611625 ETDCA0A1B0GVM5 59 aa9.02□□□□□ -0.97
CDH1-212ENST00000611625 SDIM1Q6ZPB5 146 aa9.02□□□□□ -0.97
CDH1-212ENST00000611625 LINC01006Q8NI28 216 aa9.01□□□□□ -0.97
CDH1-212ENST00000611625 FUSP35637 526 aaKnown RBP eCLIP9.01□□□□□ -0.97
CDH1-212ENST00000611625 PKD1L2Q7Z442 2459 aa9.01□□□□□ -0.97
CDH1-212ENST00000611625 JMJD1CQ15652 2540 aa9.01□□□□□ -0.97
CDH1-212ENST00000611625 NDUFA7O95182 113 aa9.01□□□□□ -0.97
CDH1-212ENST00000611625 ADAMTSL4-AS1Q5T5F5 129 aa9□□□□□ -0.97
CDH1-212ENST00000611625 SMIM1B2RUZ4 78 aa9□□□□□ -0.97
CDH1-212ENST00000611625 J3KT08 172 aa9□□□□□ -0.97
CDH1-212ENST00000611625 UQCRQO14949 82 aa9□□□□□ -0.97
CDH1-212ENST00000611625 POLQO75417 2590 aa9□□□□□ -0.97
CDH1-212ENST00000611625 PDE6GP18545 87 aa8.99□□□□□ -0.97
CDH1-212ENST00000611625 BBC3Q96PG8 261 aaPredicted RBP8.99□□□□□ -0.97
CDH1-212ENST00000611625 ZFYVE26Q68DK2 2539 aa8.99□□□□□ -0.97
CDH1-212ENST00000611625 MKI67P46013 3256 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms