RNA–Protein interactions for RNA: ENST00000587427.5

GHDC-207, Transcript of GH3 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GHDC, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-207ENST00000587427 CFHR3Q02985 330 aa11.74□□□□□ -0.53
GHDC-207ENST00000587427 CEMP1Q6PRD7 247 aaPredicted RBP11.74□□□□□ -0.53
GHDC-207ENST00000587427 IGHV1-58A0A0C4DH39 117 aa11.73□□□□□ -0.53
GHDC-207ENST00000587427 BLCAPP62952 87 aa11.73□□□□□ -0.53
GHDC-207ENST00000587427 RNASE13Q5GAN3 156 aaKnown RBP11.73□□□□□ -0.53
GHDC-207ENST00000587427 SORL1Q92673 2214 aa11.73□□□□□ -0.53
GHDC-207ENST00000587427 A8MZ25 164 aa11.72□□□□□ -0.53
GHDC-207ENST00000587427 H3BUX3 64 aa11.72□□□□□ -0.53
GHDC-207ENST00000587427 MRPL23Q16540 153 aaKnown RBP11.72□□□□□ -0.53
GHDC-207ENST00000587427 CLEC2BQ92478 149 aa11.72□□□□□ -0.53
GHDC-207ENST00000587427 MIAQ16674 131 aa11.72□□□□□ -0.53
GHDC-207ENST00000587427 DUX3Q96PT4 197 aa11.72□□□□□ -0.53
GHDC-207ENST00000587427 HIVEP2P31629 2446 aa11.72□□□□□ -0.53
GHDC-207ENST00000587427 COX6CP09669 75 aa11.71□□□□□ -0.53
GHDC-207ENST00000587427 SNRPD3P62318 126 aaKnown RBP11.71□□□□□ -0.53
GHDC-207ENST00000587427 NDUFA12Q9UI09 145 aa11.71□□□□□ -0.53
GHDC-207ENST00000587427 NSD1Q96L73 2696 aaPredicted RBP11.71□□□□□ -0.53
GHDC-207ENST00000587427 IGHV4-38-2P0DP08 117 aa11.71□□□□□ -0.54
GHDC-207ENST00000587427 FN1P02751 2386 aaKnown RBP11.7□□□□□ -0.54
GHDC-207ENST00000587427 TRGV11A0A075B6L2 103 aa11.7□□□□□ -0.54
GHDC-207ENST00000587427 INAFM1C9JVW0 142 aa11.7□□□□□ -0.54
GHDC-207ENST00000587427 RNF152Q8N8N0 203 aa11.7□□□□□ -0.54
GHDC-207ENST00000587427 K7EQG2 157 aa11.7□□□□□ -0.54
GHDC-207ENST00000587427 SPINK13Q1W4C9 94 aa11.7□□□□□ -0.54
GHDC-207ENST00000587427 VSIG2Q96IQ7 327 aa11.7□□□□□ -0.54
GHDC-207ENST00000587427 IGHV3-73A0A0B4J1V6 119 aa11.69□□□□□ -0.54
GHDC-207ENST00000587427 FAM240AA0A1B0GVK7 77 aa11.69□□□□□ -0.54
GHDC-207ENST00000587427 TINCRA0A1B0GVN0 87 aa11.69□□□□□ -0.54
GHDC-207ENST00000587427 DEFB121Q5J5C9 76 aa11.69□□□□□ -0.54
GHDC-207ENST00000587427 LST1O00453 97 aa11.68□□□□□ -0.54
GHDC-207ENST00000587427 SMIM20Q8N5G0 67 aa11.68□□□□□ -0.54
GHDC-207ENST00000587427 TIMM17BO60830 172 aa11.68□□□□□ -0.54
GHDC-207ENST00000587427 PROK1P58294 105 aa11.68□□□□□ -0.54
GHDC-207ENST00000587427 TMEM61Q8N0U2 210 aa11.68□□□□□ -0.54
GHDC-207ENST00000587427 SPANXA1Q9NS26 97 aa11.68□□□□□ -0.54
GHDC-207ENST00000587427 DAND5Q8N907 189 aa11.67□□□□□ -0.54
GHDC-207ENST00000587427 CHCHD5Q9BSY4 110 aa11.66□□□□□ -0.54
GHDC-207ENST00000587427 Q9UF83 564 aa11.66□□□□□ -0.54
GHDC-207ENST00000587427 PSMB8P28062 276 aa11.65□□□□□ -0.54
GHDC-207ENST00000587427 HTN1P15515 57 aa11.65□□□□□ -0.54
GHDC-207ENST00000587427 MEIG1Q5JSS6 88 aa11.65□□□□□ -0.54
GHDC-207ENST00000587427 TNFRSF18Q9Y5U5 241 aa11.65□□□□□ -0.54
GHDC-207ENST00000587427 HERV-K104P63124 156 aa11.64□□□□□ -0.55
GHDC-207ENST00000587427 NF1P21359 2839 aa11.64□□□□□ -0.55
GHDC-207ENST00000587427 SHISA2Q6UWI4 295 aa11.64□□□□□ -0.55
GHDC-207ENST00000587427 C3orf56Q8N813 242 aa11.64□□□□□ -0.55
GHDC-207ENST00000587427 CHCHD7Q9BUK0 85 aa11.64□□□□□ -0.55
GHDC-207ENST00000587427 UBE2D4Q9Y2X8 147 aa11.64□□□□□ -0.55
GHDC-207ENST00000587427 SETD2Q9BYW2 2564 aaPredicted RBP11.63□□□□□ -0.55
GHDC-207ENST00000587427 J3QLI3 93 aa11.63□□□□□ -0.55
GHDC-207ENST00000587427 TRBV7-7A0A0K0K1E9 115 aa11.62□□□□□ -0.55
GHDC-207ENST00000587427 PRM2P04554 102 aa11.62□□□□□ -0.55
GHDC-207ENST00000587427 RBMY1A1P0DJD3 496 aaKnown RBP11.62□□□□□ -0.55
GHDC-207ENST00000587427 RBMY1CP0DJD4 496 aa11.62□□□□□ -0.55
GHDC-207ENST00000587427 RBMY1FQ15415 496 aaKnown RBP11.62□□□□□ -0.55
GHDC-207ENST00000587427 TMEM95Q3KNT9 176 aa11.62□□□□□ -0.55
GHDC-207ENST00000587427 TMEM89A2RUT3 159 aa11.61□□□□□ -0.55
GHDC-207ENST00000587427 KNCNA6PVL3 124 aa11.61□□□□□ -0.55
GHDC-207ENST00000587427 NDUFA1O15239 70 aa11.61□□□□□ -0.55
GHDC-207ENST00000587427 FSHBP01225 129 aa11.61□□□□□ -0.55
GHDC-207ENST00000587427 PIK3CD-AS1Q5SR53 167 aa11.61□□□□□ -0.55
GHDC-207ENST00000587427 FAM110AQ9BQ89 295 aa11.61□□□□□ -0.55
GHDC-207ENST00000587427 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.6□□□□□ -0.55
GHDC-207ENST00000587427 IGKV2-29A2NJV5 120 aaPredicted RBP11.6□□□□□ -0.55
GHDC-207ENST00000587427 DUX5Q96PT3 197 aa11.6□□□□□ -0.55
GHDC-207ENST00000587427 IGLV5-45A0A087WSX0 123 aa11.59□□□□□ -0.55
GHDC-207ENST00000587427 TIRAPP58753 221 aa11.59□□□□□ -0.55
GHDC-207ENST00000587427 C10orf99Q6UWK7 81 aa11.59□□□□□ -0.55
GHDC-207ENST00000587427 CITED2Q99967 270 aaPredicted RBP11.59□□□□□ -0.55
GHDC-207ENST00000587427 JMJD1CQ15652 2540 aa11.59□□□□□ -0.55
GHDC-207ENST00000587427 Q6ZSN1 163 aa11.59□□□□□ -0.55
GHDC-207ENST00000587427 DEFB112Q30KQ8 113 aa11.58□□□□□ -0.56
GHDC-207ENST00000587427 LINC00467Q9BRT7 94 aa11.58□□□□□ -0.56
GHDC-207ENST00000587427 ACYP1P07311 99 aa11.57□□□□□ -0.56
GHDC-207ENST00000587427 SYNJ2BPP57105 145 aa11.57□□□□□ -0.56
GHDC-207ENST00000587427 CDKN2A-AS1Q9UH64 79 aa11.57□□□□□ -0.56
GHDC-207ENST00000587427 A0A0U1RRA0 63 aa11.57□□□□□ -0.56
GHDC-207ENST00000587427 CIRBPQ14011 172 aaKnown RBP11.57□□□□□ -0.56
GHDC-207ENST00000587427 TMEM101Q96IK0 257 aa11.57□□□□□ -0.56
GHDC-207ENST00000587427 IGHV3-38A0A0C4DH36 116 aa11.56□□□□□ -0.56
GHDC-207ENST00000587427 A8MTW9 85 aa11.56□□□□□ -0.56
GHDC-207ENST00000587427 DNAJC30Q96LL9 226 aa11.56□□□□□ -0.56
GHDC-207ENST00000587427 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.56□□□□□ -0.56
GHDC-207ENST00000587427 ZNF625Q96I27 306 aaPredicted RBP11.56□□□□□ -0.56
GHDC-207ENST00000587427 LINC00308Q8TCZ7 52 aa11.55□□□□□ -0.56
GHDC-207ENST00000587427 COX7A2LO14548 114 aa11.55□□□□□ -0.56
GHDC-207ENST00000587427 ZNF415Q09FC8 603 aa11.55□□□□□ -0.56
GHDC-207ENST00000587427 IMUPQ9GZP8 106 aa11.55□□□□□ -0.56
GHDC-207ENST00000587427 IGLV5-39A0A0G2JS06 123 aa11.54□□□□□ -0.56
GHDC-207ENST00000587427 FAM236AA0A1B0GUQ0 79 aa11.54□□□□□ -0.56
GHDC-207ENST00000587427 FAM236BA0A1B0GV22 79 aa11.54□□□□□ -0.56
GHDC-207ENST00000587427 IGHV3-53P01767 116 aa11.54□□□□□ -0.56
GHDC-207ENST00000587427 SMCR5Q8TEV8 140 aa11.54□□□□□ -0.56
GHDC-207ENST00000587427 LINC01587Q99440 93 aa11.54□□□□□ -0.56
GHDC-207ENST00000587427 COX6A2Q02221 97 aa11.53□□□□□ -0.56
GHDC-207ENST00000587427 IGHV4-59P01825 116 aa11.53□□□□□ -0.56
GHDC-207ENST00000587427 Q8N2B8 174 aa11.53□□□□□ -0.56
GHDC-207ENST00000587427 COPS9Q8WXC6 57 aa11.53□□□□□ -0.56
GHDC-207ENST00000587427 ESM1Q9NQ30 184 aa11.53□□□□□ -0.56
GHDC-207ENST00000587427 NACAE9PAV3 2078 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms