RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 TRAV12-1A0A0B4J245 112 aa5.61□□□□□ -1.51
TCF4-216ENST00000562680 PRIMA1Q86XR5 153 aa5.61□□□□□ -1.51
TCF4-216ENST00000562680 Q8N976 141 aa5.61□□□□□ -1.51
TCF4-216ENST00000562680 GYPEP15421 78 aa5.61□□□□□ -1.51
TCF4-216ENST00000562680 C2orf91Q6ZV80 131 aa5.61□□□□□ -1.51
TCF4-216ENST00000562680 MRPL35Q9NZE8 188 aaKnown RBP5.61□□□□□ -1.51
TCF4-216ENST00000562680 PROK1P58294 105 aa5.6□□□□□ -1.51
TCF4-216ENST00000562680 RPL39LQ96EH5 51 aaKnown RBP5.6□□□□□ -1.51
TCF4-216ENST00000562680 CNFNQ9BYD5 112 aa5.6□□□□□ -1.51
TCF4-216ENST00000562680 IGHV3-38A0A0C4DH36 116 aa5.6□□□□□ -1.51
TCF4-216ENST00000562680 SOCS3O14543 225 aa5.6□□□□□ -1.51
TCF4-216ENST00000562680 CRIP1P50238 77 aa5.6□□□□□ -1.51
TCF4-216ENST00000562680 PYGO1Q9Y3Y4 419 aa5.6□□□□□ -1.51
TCF4-216ENST00000562680 GATA1P15976 413 aaPredicted RBP5.6□□□□□ -1.51
TCF4-216ENST00000562680 LINC00173Q6ZV60 143 aa5.6□□□□□ -1.51
TCF4-216ENST00000562680 HHLA3Q9XRX5 114 aa5.6□□□□□ -1.51
TCF4-216ENST00000562680 POLQO75417 2590 aa5.6□□□□□ -1.51
TCF4-216ENST00000562680 MTORP42345 2549 aa5.59□□□□□ -1.51
TCF4-216ENST00000562680 TCL1BO95988 128 aa5.59□□□□□ -1.51
TCF4-216ENST00000562680 KLK5Q9Y337 293 aaPredicted RBP5.59□□□□□ -1.51
TCF4-216ENST00000562680 SMR3AQ99954 134 aa5.59□□□□□ -1.51
TCF4-216ENST00000562680 C18orf65Q6ZTR6 163 aa5.59□□□□□ -1.51
TCF4-216ENST00000562680 VSIG2Q96IQ7 327 aa5.59□□□□□ -1.51
TCF4-216ENST00000562680 TOMM6Q96B49 74 aa5.59□□□□□ -1.52
TCF4-216ENST00000562680 PCNTO95613 3336 aa5.59□□□□□ -1.52
TCF4-216ENST00000562680 TRBV6-5A0A0K0K1A5 114 aa5.58□□□□□ -1.52
TCF4-216ENST00000562680 CCL18P55774 89 aa5.58□□□□□ -1.52
TCF4-216ENST00000562680 RPL18AQ02543 176 aaKnown RBP5.58□□□□□ -1.52
TCF4-216ENST00000562680 C20orf203Q8NBC4 194 aa5.58□□□□□ -1.52
TCF4-216ENST00000562680 TP73-AS1Q9UF72 201 aa5.58□□□□□ -1.52
TCF4-216ENST00000562680 SORL1Q92673 2214 aa5.58□□□□□ -1.52
TCF4-216ENST00000562680 PSCAO43653 123 aa5.58□□□□□ -1.52
TCF4-216ENST00000562680 DKK2Q9UBU2 259 aa5.58□□□□□ -1.52
TCF4-216ENST00000562680 FN1P02751 2386 aaKnown RBP5.58□□□□□ -1.52
TCF4-216ENST00000562680 A0A096LNT2 108 aa5.58□□□□□ -1.52
TCF4-216ENST00000562680 H7C423 109 aa5.58□□□□□ -1.52
TCF4-216ENST00000562680 ANGP03950 147 aaKnown RBP5.58□□□□□ -1.52
TCF4-216ENST00000562680 ODF3L2Q3SX64 289 aa5.58□□□□□ -1.52
TCF4-216ENST00000562680 DSCAML1Q8TD84 2053 aa5.58□□□□□ -1.52
TCF4-216ENST00000562680 SLC25A29Q8N8R3 303 aa5.57□□□□□ -1.52
TCF4-216ENST00000562680 SPTSSBQ8NFR3 76 aa5.57□□□□□ -1.52
TCF4-216ENST00000562680 UBL5Q9BZL1 73 aa5.57□□□□□ -1.52
TCF4-216ENST00000562680 U3KQK5 164 aa5.57□□□□□ -1.52
TCF4-216ENST00000562680 TRBV6-4A0A1B0GX49 114 aa5.57□□□□□ -1.52
TCF4-216ENST00000562680 NDUFC1O43677 76 aa5.57□□□□□ -1.52
TCF4-216ENST00000562680 GDF5OSQ5U4N7 250 aa5.57□□□□□ -1.52
TCF4-216ENST00000562680 NDUFA12Q9UI09 145 aa5.57□□□□□ -1.52
TCF4-216ENST00000562680 A0A0J9YY99 117 aa5.57□□□□□ -1.52
TCF4-216ENST00000562680 LINC00482Q8N8I6 264 aa5.57□□□□□ -1.52
TCF4-216ENST00000562680 CRYGDP07320 174 aa5.56□□□□□ -1.52
TCF4-216ENST00000562680 CRYGAP11844 174 aa5.56□□□□□ -1.52
TCF4-216ENST00000562680 C20orf197Q8N268 126 aa5.56□□□□□ -1.52
TCF4-216ENST00000562680 ESM1Q9NQ30 184 aa5.56□□□□□ -1.52
TCF4-216ENST00000562680 Q6ZTI0 123 aa5.56□□□□□ -1.52
TCF4-216ENST00000562680 LINC00467Q9BRT7 94 aa5.56□□□□□ -1.52
TCF4-216ENST00000562680 RNASE3P12724 160 aaKnown RBP5.56□□□□□ -1.52
TCF4-216ENST00000562680 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.56□□□□□ -1.52
TCF4-216ENST00000562680 IGKV2-29A2NJV5 120 aaPredicted RBP5.56□□□□□ -1.52
TCF4-216ENST00000562680 Q6ZQT7 251 aa5.56□□□□□ -1.52
TCF4-216ENST00000562680 FAM222AQ5U5X8 452 aa5.55□□□□□ -1.52
TCF4-216ENST00000562680 TET2Q6N021 2002 aaPredicted RBP5.55□□□□□ -1.52
TCF4-216ENST00000562680 TEX49A0A1B0GTD5 131 aa5.55□□□□□ -1.52
TCF4-216ENST00000562680 IGKV3D-7A0A0C4DH55 119 aa5.55□□□□□ -1.52
TCF4-216ENST00000562680 NDUFS5O43920 106 aa5.55□□□□□ -1.52
TCF4-216ENST00000562680 FHL3Q13643 280 aa5.55□□□□□ -1.52
TCF4-216ENST00000562680 C5orf42Q9H799 3197 aa5.55□□□□□ -1.52
TCF4-216ENST00000562680 FRMD6-AS1P0C7T7 363 aa5.55□□□□□ -1.52
TCF4-216ENST00000562680 PRR9Q5T870 116 aa5.55□□□□□ -1.52
TCF4-216ENST00000562680 C11orf45Q8TAV5 145 aa5.55□□□□□ -1.52
TCF4-216ENST00000562680 M0QY20 66 aa5.54□□□□□ -1.52
TCF4-216ENST00000562680 ZNF625Q96I27 306 aaPredicted RBP5.54□□□□□ -1.52
TCF4-216ENST00000562680 C11orf21Q9P2W6 132 aa5.54□□□□□ -1.52
TCF4-216ENST00000562680 ACANP16112 2415 aa5.54□□□□□ -1.52
TCF4-216ENST00000562680 SETD2Q9BYW2 2564 aaPredicted RBP5.54□□□□□ -1.52
TCF4-216ENST00000562680 TRBV27A0A0K0K1C4 114 aa5.54□□□□□ -1.52
TCF4-216ENST00000562680 UBE2BP63146 152 aa5.54□□□□□ -1.52
TCF4-216ENST00000562680 PRRC2CQ9Y520 2896 aaKnown RBP5.54□□□□□ -1.52
TCF4-216ENST00000562680 RNF185Q96GF1 192 aa5.54□□□□□ -1.52
TCF4-216ENST00000562680 FUSP35637 526 aaKnown RBP eCLIP5.53□□□□□ -1.52
TCF4-216ENST00000562680 C11orf86A6NJI1 115 aa5.53□□□□□ -1.52
TCF4-216ENST00000562680 A0A096LPF7 62 aa5.53□□□□□ -1.52
TCF4-216ENST00000562680 TRBV7-7A0A0K0K1E9 115 aa5.53□□□□□ -1.52
TCF4-216ENST00000562680 MKI67P46013 3256 aaKnown RBP5.53□□□□□ -1.52
TCF4-216ENST00000562680 NFE4Q86UQ8 179 aa5.53□□□□□ -1.52
TCF4-216ENST00000562680 C2CD3Q4AC94 2353 aa5.52□□□□□ -1.53
TCF4-216ENST00000562680 A0A0J9YXV3 536 aa5.52□□□□□ -1.53
TCF4-216ENST00000562680 USP17L23D6RBM5 183 aa5.52□□□□□ -1.53
TCF4-216ENST00000562680 COX7A2LO14548 114 aa5.52□□□□□ -1.53
TCF4-216ENST00000562680 NXPH4O95158 308 aa5.52□□□□□ -1.53
TCF4-216ENST00000562680 LINC00310P59036 64 aa5.52□□□□□ -1.53
TCF4-216ENST00000562680 BAALC-AS2P0C853 105 aa5.52□□□□□ -1.53
TCF4-216ENST00000562680 NEXN-AS1Q8NBZ9 246 aa5.52□□□□□ -1.53
TCF4-216ENST00000562680 F8WEM9 126 aa5.52□□□□□ -1.53
TCF4-216ENST00000562680 RPL39P62891 51 aaKnown RBP5.51□□□□□ -1.53
TCF4-216ENST00000562680 MUSTN1Q8IVN3 82 aa5.51□□□□□ -1.53
TCF4-216ENST00000562680 IGHV4-28A0A0C4DH34 117 aa5.51□□□□□ -1.53
TCF4-216ENST00000562680 SERTAD4-AS1Q5TG53 156 aa5.51□□□□□ -1.53
TCF4-216ENST00000562680 TRAV10A0A0B4J240 114 aa5.51□□□□□ -1.53
TCF4-216ENST00000562680 POLR2KP53803 58 aaKnown RBP5.51□□□□□ -1.53
TCF4-216ENST00000562680 BEAN1Q3B7T3 259 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms