RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 C3orf22Q8N5N4 141 aa3.75□□□□□ -1.81
HMG20A-204ENST00000558288 RHPN1-AS1Q9BWJ2 59 aa3.75□□□□□ -1.81
HMG20A-204ENST00000558288 A0A0J9YX75 114 aa3.74□□□□□ -1.81
HMG20A-204ENST00000558288 M0QY20 66 aa3.74□□□□□ -1.81
HMG20A-204ENST00000558288 NPFFO15130 113 aa3.74□□□□□ -1.81
HMG20A-204ENST00000558288 NXPH4O95158 308 aa3.74□□□□□ -1.81
HMG20A-204ENST00000558288 ZNF625Q96I27 306 aaPredicted RBP3.74□□□□□ -1.81
HMG20A-204ENST00000558288 IGHV1-58A0A0C4DH39 117 aa3.74□□□□□ -1.81
HMG20A-204ENST00000558288 RS1O15537 224 aa3.74□□□□□ -1.81
HMG20A-204ENST00000558288 PF4V1P10720 104 aa3.74□□□□□ -1.81
HMG20A-204ENST00000558288 TMEM61Q8N0U2 210 aa3.74□□□□□ -1.81
HMG20A-204ENST00000558288 POM121L12Q8N7R1 296 aa3.74□□□□□ -1.81
HMG20A-204ENST00000558288 LITAFQ99732 161 aa3.74□□□□□ -1.81
HMG20A-204ENST00000558288 CSDC2Q9Y534 153 aaKnown RBP3.74□□□□□ -1.81
HMG20A-204ENST00000558288 TRBV6-5A0A0K0K1A5 114 aa3.74□□□□□ -1.81
HMG20A-204ENST00000558288 GAGE2AQ6NT46 116 aa3.74□□□□□ -1.81
HMG20A-204ENST00000558288 DNAJC30Q96LL9 226 aa3.74□□□□□ -1.81
HMG20A-204ENST00000558288 BPESC1Q9GZL8 116 aa3.74□□□□□ -1.81
HMG20A-204ENST00000558288 FAM223BA6NKX1 122 aa3.73□□□□□ -1.81
HMG20A-204ENST00000558288 NDUFA4O00483 81 aa3.73□□□□□ -1.81
HMG20A-204ENST00000558288 SOCS3O14543 225 aa3.73□□□□□ -1.81
HMG20A-204ENST00000558288 UQCRQO14949 82 aa3.73□□□□□ -1.81
HMG20A-204ENST00000558288 ACYP1P07311 99 aa3.73□□□□□ -1.81
HMG20A-204ENST00000558288 FAM223AQ8IWN6 122 aa3.73□□□□□ -1.81
HMG20A-204ENST00000558288 SPATA3Q8NHX4 192 aa3.73□□□□□ -1.81
HMG20A-204ENST00000558288 SPANXDQ9BXN6 97 aa3.73□□□□□ -1.81
HMG20A-204ENST00000558288 SPANXCQ9NY87 97 aa3.73□□□□□ -1.81
HMG20A-204ENST00000558288 WNK1Q9H4A3 2382 aa3.73□□□□□ -1.81
HMG20A-204ENST00000558288 FBN1P35555 2871 aaKnown RBP3.73□□□□□ -1.81
HMG20A-204ENST00000558288 CIRBPQ14011 172 aaKnown RBP3.73□□□□□ -1.81
HMG20A-204ENST00000558288 KRTAP21-3Q3LHN1 58 aa3.73□□□□□ -1.81
HMG20A-204ENST00000558288 LINC00643Q86TS7 51 aa3.73□□□□□ -1.81
HMG20A-204ENST00000558288 SMCR5Q8TEV8 140 aa3.73□□□□□ -1.81
HMG20A-204ENST00000558288 IGHV3-16A0A0C4DH30 117 aa3.73□□□□□ -1.81
HMG20A-204ENST00000558288 KLLNB2CW77 178 aa3.73□□□□□ -1.81
HMG20A-204ENST00000558288 J3KT08 172 aa3.73□□□□□ -1.81
HMG20A-204ENST00000558288 DAZ2Q13117 558 aaKnown RBP3.73□□□□□ -1.81
HMG20A-204ENST00000558288 LY6EQ16553 131 aa3.73□□□□□ -1.81
HMG20A-204ENST00000558288 SPINK13Q1W4C9 94 aa3.73□□□□□ -1.81
HMG20A-204ENST00000558288 DAZ4Q86SG3 579 aaKnown RBP3.73□□□□□ -1.81
HMG20A-204ENST00000558288 C5orf56Q8N8D9 126 aa3.73□□□□□ -1.81
HMG20A-204ENST00000558288 VSIG2Q96IQ7 327 aa3.73□□□□□ -1.81
HMG20A-204ENST00000558288 FAM19A4Q96LR4 140 aa3.73□□□□□ -1.81
HMG20A-204ENST00000558288 IMUPQ9GZP8 106 aa3.73□□□□□ -1.81
HMG20A-204ENST00000558288 DAZ1Q9NQZ3 744 aaKnown RBP3.73□□□□□ -1.81
HMG20A-204ENST00000558288 DAZ3Q9NR90 486 aaKnown RBP3.73□□□□□ -1.81
HMG20A-204ENST00000558288 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.72□□□□□ -1.81
HMG20A-204ENST00000558288 IGKV2-29A2NJV5 120 aaPredicted RBP3.72□□□□□ -1.81
HMG20A-204ENST00000558288 KNCNA6PVL3 124 aa3.72□□□□□ -1.81
HMG20A-204ENST00000558288 EDN2P20800 178 aa3.72□□□□□ -1.81
HMG20A-204ENST00000558288 KRTAP24-1Q3LI83 254 aa3.72□□□□□ -1.81
HMG20A-204ENST00000558288 LINC01600Q96MT4 127 aa3.72□□□□□ -1.81
HMG20A-204ENST00000558288 VPS13CQ709C8 3753 aa3.72□□□□□ -1.81
HMG20A-204ENST00000558288 TRAV13-1A0A0B4J241 112 aa3.72□□□□□ -1.81
HMG20A-204ENST00000558288 BAALC-AS2P0C853 105 aa3.72□□□□□ -1.81
HMG20A-204ENST00000558288 MRPS36P82909 103 aaKnown RBP3.72□□□□□ -1.81
HMG20A-204ENST00000558288 DEFB121Q5J5C9 76 aa3.72□□□□□ -1.81
HMG20A-204ENST00000558288 KRTAP1-3Q8IUG1 177 aa3.72□□□□□ -1.81
HMG20A-204ENST00000558288 SIRPDQ9H106 197 aa3.72□□□□□ -1.81
HMG20A-204ENST00000558288 AKAP9Q99996 3911 aa3.72□□□□□ -1.81
HMG20A-204ENST00000558288 IGHV1OR15-1A0A075B7D0 117 aa3.72□□□□□ -1.81
HMG20A-204ENST00000558288 IGHV3-38A0A0C4DH36 116 aa3.72□□□□□ -1.81
HMG20A-204ENST00000558288 IGHV4-61A0A0C4DH41 118 aa3.72□□□□□ -1.81
HMG20A-204ENST00000558288 PROK1P58294 105 aa3.72□□□□□ -1.81
HMG20A-204ENST00000558288 C5orf47Q569G3 176 aa3.72□□□□□ -1.81
HMG20A-204ENST00000558288 DGAT2L7PQ6IED9 249 aa3.72□□□□□ -1.81
HMG20A-204ENST00000558288 FAM19A5Q7Z5A7 132 aaPredicted RBP3.72□□□□□ -1.81
HMG20A-204ENST00000558288 APRG1Q8IVJ8 170 aa3.72□□□□□ -1.81
HMG20A-204ENST00000558288 LINC00526Q96FQ7 95 aa3.72□□□□□ -1.81
HMG20A-204ENST00000558288 MOB4Q9Y3A3 225 aa3.72□□□□□ -1.81
HMG20A-204ENST00000558288 hADV29S1A0JD25 119 aa3.71□□□□□ -1.82
HMG20A-204ENST00000558288 COX7A2LO14548 114 aa3.71□□□□□ -1.82
HMG20A-204ENST00000558288 DSCR9P59020 149 aa3.71□□□□□ -1.82
HMG20A-204ENST00000558288 BRD3OSQ6XYD6 125 aa3.71□□□□□ -1.82
HMG20A-204ENST00000558288 SVEP1Q4LDE5 3571 aa3.71□□□□□ -1.82
HMG20A-204ENST00000558288 HOXD3P31249 432 aaPredicted RBP3.71□□□□□ -1.82
HMG20A-204ENST00000558288 C9orf85Q96MD7 179 aa3.71□□□□□ -1.82
HMG20A-204ENST00000558288 Q9H8V8 135 aa3.71□□□□□ -1.82
HMG20A-204ENST00000558288 CDKN2A-AS1Q9UH64 79 aa3.71□□□□□ -1.82
HMG20A-204ENST00000558288 ZNF469Q96JG9 3925 aaPredicted RBP3.71□□□□□ -1.82
HMG20A-204ENST00000558288 TINCRA0A1B0GVN0 87 aa3.71□□□□□ -1.82
HMG20A-204ENST00000558288 SMIM9A6NGZ8 99 aa3.71□□□□□ -1.82
HMG20A-204ENST00000558288 COX7CP15954 63 aa3.71□□□□□ -1.82
HMG20A-204ENST00000558288 SDIM1Q6ZPB5 146 aa3.71□□□□□ -1.82
HMG20A-204ENST00000558288 CITED2Q99967 270 aaPredicted RBP3.71□□□□□ -1.82
HMG20A-204ENST00000558288 Q9HAA7 133 aa3.71□□□□□ -1.82
HMG20A-204ENST00000558288 DNAL4O96015 105 aa3.7□□□□□ -1.82
HMG20A-204ENST00000558288 TRACP01848 142 aa3.7□□□□□ -1.82
HMG20A-204ENST00000558288 TIRAPP58753 221 aa3.7□□□□□ -1.82
HMG20A-204ENST00000558288 SNRPD3P62318 126 aaKnown RBP3.7□□□□□ -1.82
HMG20A-204ENST00000558288 OR13C6PQ8NH95 151 aa3.7□□□□□ -1.82
HMG20A-204ENST00000558288 LINC00308Q8TCZ7 52 aa3.7□□□□□ -1.82
HMG20A-204ENST00000558288 DCANP1Q8TF63 244 aa3.7□□□□□ -1.82
HMG20A-204ENST00000558288 SORL1Q92673 2214 aa3.7□□□□□ -1.82
HMG20A-204ENST00000558288 IGKV3D-7A0A0C4DH55 119 aa3.7□□□□□ -1.82
HMG20A-204ENST00000558288 ATP5G1P05496 136 aa3.7□□□□□ -1.82
HMG20A-204ENST00000558288 Q8N2B8 174 aa3.7□□□□□ -1.82
HMG20A-204ENST00000558288 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.7□□□□□ -1.82
HMG20A-204ENST00000558288 PEMTQ9UBM1 199 aa3.7□□□□□ -1.82
HMG20A-204ENST00000558288 PYGO1Q9Y3Y4 419 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms