RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 DSCAMO60469 2012 aa9.27□□□□□ -0.93
PCDHGA6-201ENST00000517434 MRPL36Q9P0J6 103 aaKnown RBP9.27□□□□□ -0.93
PCDHGA6-201ENST00000517434 ETDCA0A1B0GVM5 59 aa9.27□□□□□ -0.93
PCDHGA6-201ENST00000517434 LYRM9A8MSI8 78 aa9.26□□□□□ -0.93
PCDHGA6-201ENST00000517434 ENHOQ6UWT2 76 aa9.26□□□□□ -0.93
PCDHGA6-201ENST00000517434 BPY2O14599 106 aa9.26□□□□□ -0.93
PCDHGA6-201ENST00000517434 ZNF295-AS1Q8N0V1 137 aa9.26□□□□□ -0.93
PCDHGA6-201ENST00000517434 ODF3Q96PU9 254 aa9.26□□□□□ -0.93
PCDHGA6-201ENST00000517434 TRBV10-1A0A0K0K1A3 114 aa9.25□□□□□ -0.93
PCDHGA6-201ENST00000517434 CAMK2N2Q96S95 79 aa9.25□□□□□ -0.93
PCDHGA6-201ENST00000517434 HIVEP3Q5T1R4 2406 aa9.25□□□□□ -0.93
PCDHGA6-201ENST00000517434 A0A0J9YX75 114 aa9.25□□□□□ -0.93
PCDHGA6-201ENST00000517434 RITA1Q96K30 269 aa9.25□□□□□ -0.93
PCDHGA6-201ENST00000517434 CEP192Q8TEP8 1941 aa9.25□□□□□ -0.93
PCDHGA6-201ENST00000517434 DIRC1Q969H9 104 aa9.24□□□□□ -0.93
PCDHGA6-201ENST00000517434 PSMG3-AS1Q96PY0 264 aa9.24□□□□□ -0.93
PCDHGA6-201ENST00000517434 MAP6D1Q9H9H5 199 aa9.24□□□□□ -0.93
PCDHGA6-201ENST00000517434 LRP4O75096 1905 aa9.24□□□□□ -0.93
PCDHGA6-201ENST00000517434 MRPS36P82909 103 aaKnown RBP9.24□□□□□ -0.93
PCDHGA6-201ENST00000517434 LINC00526Q96FQ7 95 aa9.24□□□□□ -0.93
PCDHGA6-201ENST00000517434 Q6ZQT7 251 aa9.24□□□□□ -0.93
PCDHGA6-201ENST00000517434 TLN1Q9Y490 2541 aaKnown RBP9.23□□□□□ -0.93
PCDHGA6-201ENST00000517434 TRBV7-3A0A075B6L6 115 aa9.23□□□□□ -0.93
PCDHGA6-201ENST00000517434 MIFP14174 115 aa9.23□□□□□ -0.93
PCDHGA6-201ENST00000517434 WNK1Q9H4A3 2382 aa9.23□□□□□ -0.93
PCDHGA6-201ENST00000517434 U3KQK5 164 aa9.23□□□□□ -0.93
PCDHGA6-201ENST00000517434 PIEZO2Q9H5I5 2752 aa9.23□□□□□ -0.93
PCDHGA6-201ENST00000517434 Q8N976 141 aa9.23□□□□□ -0.93
PCDHGA6-201ENST00000517434 LST1O00453 97 aa9.22□□□□□ -0.93
PCDHGA6-201ENST00000517434 TIRAPP58753 221 aa9.22□□□□□ -0.93
PCDHGA6-201ENST00000517434 DEFB114Q30KQ6 69 aa9.22□□□□□ -0.93
PCDHGA6-201ENST00000517434 FAM19A5Q7Z5A7 132 aaPredicted RBP9.22□□□□□ -0.93
PCDHGA6-201ENST00000517434 SPTBN5Q9NRC6 3674 aaKnown RBP9.22□□□□□ -0.93
PCDHGA6-201ENST00000517434 IGKV1D-37A0A075B6S9 117 aa9.22□□□□□ -0.93
PCDHGA6-201ENST00000517434 TNCP24821 2201 aa9.21□□□□□ -0.93
PCDHGA6-201ENST00000517434 USP34Q70CQ2 3546 aa9.21□□□□□ -0.93
PCDHGA6-201ENST00000517434 NDUFA1O15239 70 aa9.21□□□□□ -0.93
PCDHGA6-201ENST00000517434 IGHV3-30P01768 117 aa9.21□□□□□ -0.93
PCDHGA6-201ENST00000517434 IGHV3-30-5P0DP03 117 aa9.21□□□□□ -0.93
PCDHGA6-201ENST00000517434 ZNF22P17026 224 aaPredicted RBP9.21□□□□□ -0.93
PCDHGA6-201ENST00000517434 LINC00310P59036 64 aa9.21□□□□□ -0.93
PCDHGA6-201ENST00000517434 MYO15AQ9UKN7 3530 aa9.21□□□□□ -0.94
PCDHGA6-201ENST00000517434 SERP1Q9Y6X1 66 aa9.21□□□□□ -0.94
PCDHGA6-201ENST00000517434 TMEM223A0PJW6 202 aa9.21□□□□□ -0.94
PCDHGA6-201ENST00000517434 ATG2AQ2TAZ0 1938 aa9.21□□□□□ -0.94
PCDHGA6-201ENST00000517434 ZNF80P51504 273 aaPredicted RBP9.2□□□□□ -0.94
PCDHGA6-201ENST00000517434 PLXNB1O43157 2135 aa9.2□□□□□ -0.94
PCDHGA6-201ENST00000517434 MED12LQ86YW9 2145 aa9.2□□□□□ -0.94
PCDHGA6-201ENST00000517434 LINC01006Q8NI28 216 aa9.2□□□□□ -0.94
PCDHGA6-201ENST00000517434 LINC00308Q8TCZ7 52 aa9.2□□□□□ -0.94
PCDHGA6-201ENST00000517434 NCR3O14931 201 aa9.19□□□□□ -0.94
PCDHGA6-201ENST00000517434 CHD8Q9HCK8 2581 aa9.19□□□□□ -0.94
PCDHGA6-201ENST00000517434 PIK3CD-AS1Q5SR53 167 aa9.19□□□□□ -0.94
PCDHGA6-201ENST00000517434 K7EQG2 157 aa9.19□□□□□ -0.94
PCDHGA6-201ENST00000517434 Q6JHZ5 121 aa9.19□□□□□ -0.94
PCDHGA6-201ENST00000517434 E7EUB6 86 aa9.18□□□□□ -0.94
PCDHGA6-201ENST00000517434 CSDC2Q9Y534 153 aaKnown RBP9.18□□□□□ -0.94
PCDHGA6-201ENST00000517434 LINC01548A6NM66 108 aa9.18□□□□□ -0.94
PCDHGA6-201ENST00000517434 SNURFQ9Y675 71 aa9.18□□□□□ -0.94
PCDHGA6-201ENST00000517434 UNQ9165/PRO28630Q6UXU0 137 aa9.18□□□□□ -0.94
PCDHGA6-201ENST00000517434 C22orf34Q6ZV56 151 aa9.18□□□□□ -0.94
PCDHGA6-201ENST00000517434 FAM19A3Q7Z5A8 133 aa9.18□□□□□ -0.94
PCDHGA6-201ENST00000517434 TRAV10A0A0B4J240 114 aa9.17□□□□□ -0.94
PCDHGA6-201ENST00000517434 COX7BP24311 80 aa9.17□□□□□ -0.94
PCDHGA6-201ENST00000517434 KIR2DL5BQ8NHK3 375 aa9.17□□□□□ -0.94
PCDHGA6-201ENST00000517434 CCDC140Q96MF4 163 aa9.17□□□□□ -0.94
PCDHGA6-201ENST00000517434 CEP295Q9C0D2 2601 aa9.17□□□□□ -0.94
PCDHGA6-201ENST00000517434 LY6LH3BQJ8 138 aa9.17□□□□□ -0.94
PCDHGA6-201ENST00000517434 C4orf48Q5BLP8 95 aa9.17□□□□□ -0.94
PCDHGA6-201ENST00000517434 DEFB131BA0A096LNP1 70 aa9.17□□□□□ -0.94
PCDHGA6-201ENST00000517434 A6NED7 52 aa9.16□□□□□ -0.94
PCDHGA6-201ENST00000517434 H7C423 109 aa9.15□□□□□ -0.94
PCDHGA6-201ENST00000517434 FAM222AQ5U5X8 452 aa9.15□□□□□ -0.94
PCDHGA6-201ENST00000517434 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.15□□□□□ -0.94
PCDHGA6-201ENST00000517434 CDKN2A-AS1Q9UH64 79 aa9.15□□□□□ -0.94
PCDHGA6-201ENST00000517434 IGLV10-54A0A075B6I4 117 aa9.15□□□□□ -0.94
PCDHGA6-201ENST00000517434 BRWD1-AS2P59051 145 aa9.15□□□□□ -0.94
PCDHGA6-201ENST00000517434 CEMP1Q6PRD7 247 aaPredicted RBP9.15□□□□□ -0.94
PCDHGA6-201ENST00000517434 ZNF702PQ9H963 129 aa9.15□□□□□ -0.94
PCDHGA6-201ENST00000517434 RNF185Q96GF1 192 aa9.15□□□□□ -0.95
PCDHGA6-201ENST00000517434 ABCA2Q9BZC7 2435 aa9.15□□□□□ -0.95
PCDHGA6-201ENST00000517434 IGLV4-3A0A075B6K6 122 aa9.15□□□□□ -0.95
PCDHGA6-201ENST00000517434 SCXQ7RTU7 201 aa9.14□□□□□ -0.95
PCDHGA6-201ENST00000517434 COL5A1P20908 1838 aaPredicted RBP9.14□□□□□ -0.95
PCDHGA6-201ENST00000517434 SPAG11BQ08648 103 aa9.14□□□□□ -0.95
PCDHGA6-201ENST00000517434 Q6ZPA2 131 aa9.14□□□□□ -0.95
PCDHGA6-201ENST00000517434 NUP210LQ5VU65 1888 aa9.14□□□□□ -0.95
PCDHGA6-201ENST00000517434 C2CD3Q4AC94 2353 aa9.14□□□□□ -0.95
PCDHGA6-201ENST00000517434 KLK12Q9UKR0 248 aa9.13□□□□□ -0.95
PCDHGA6-201ENST00000517434 SLPIP03973 132 aa9.13□□□□□ -0.95
PCDHGA6-201ENST00000517434 SEC61GP60059 68 aa9.13□□□□□ -0.95
PCDHGA6-201ENST00000517434 SORL1Q92673 2214 aa9.13□□□□□ -0.95
PCDHGA6-201ENST00000517434 PRRC2CQ9Y520 2896 aaKnown RBP9.13□□□□□ -0.95
PCDHGA6-201ENST00000517434 TNRC6BQ9UPQ9 1833 aaKnown RBP9.13□□□□□ -0.95
PCDHGA6-201ENST00000517434 ESM1Q9NQ30 184 aa9.13□□□□□ -0.95
PCDHGA6-201ENST00000517434 VPS13AQ96RL7 3174 aa9.13□□□□□ -0.95
PCDHGA6-201ENST00000517434 TRAV7A0A075B6U4 112 aa9.12□□□□□ -0.95
PCDHGA6-201ENST00000517434 DEFB4AO15263 64 aa9.12□□□□□ -0.95
PCDHGA6-201ENST00000517434 PMAIP1Q13794 54 aa9.12□□□□□ -0.95
PCDHGA6-201ENST00000517434 UBE2AP49459 152 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms