RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.52□□□□□ -1.53
PDLIM5-219ENST00000514743 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.52□□□□□ -1.53
PDLIM5-219ENST00000514743 NRACQ8N912 160 aa5.52□□□□□ -1.53
PDLIM5-219ENST00000514743 PLA2G2DQ9UNK4 145 aa5.52□□□□□ -1.53
PDLIM5-219ENST00000514743 U3KQK5 164 aa5.52□□□□□ -1.53
PDLIM5-219ENST00000514743 IGHV4-61A0A0C4DH41 118 aa5.51□□□□□ -1.53
PDLIM5-219ENST00000514743 TMEM263Q8WUH6 116 aaKnown RBP5.51□□□□□ -1.53
PDLIM5-219ENST00000514743 FBN2P35556 2912 aa5.51□□□□□ -1.53
PDLIM5-219ENST00000514743 IGHV3OR16-10A0A075B7F0 116 aa5.51□□□□□ -1.53
PDLIM5-219ENST00000514743 MRPL51Q4U2R6 128 aaKnown RBP5.51□□□□□ -1.53
PDLIM5-219ENST00000514743 CLEC19AQ6UXS0 136 aa5.51□□□□□ -1.53
PDLIM5-219ENST00000514743 TIMM17AQ99595 171 aa5.51□□□□□ -1.53
PDLIM5-219ENST00000514743 A0A0J9YY99 117 aa5.5□□□□□ -1.53
PDLIM5-219ENST00000514743 F8VRH5 84 aa5.5□□□□□ -1.53
PDLIM5-219ENST00000514743 BRD3OSQ6XYD6 125 aa5.5□□□□□ -1.53
PDLIM5-219ENST00000514743 IGHV1-69DA0A0B4J2H0 117 aa5.5□□□□□ -1.53
PDLIM5-219ENST00000514743 TRBV30A0A0K0K1B3 111 aa5.5□□□□□ -1.53
PDLIM5-219ENST00000514743 IGHV1-69P01742 117 aa5.5□□□□□ -1.53
PDLIM5-219ENST00000514743 KLHL30-AS1Q8NEE0 82 aa5.5□□□□□ -1.53
PDLIM5-219ENST00000514743 CLEC2BQ92478 149 aa5.5□□□□□ -1.53
PDLIM5-219ENST00000514743 TIMM21Q9BVV7 248 aa5.5□□□□□ -1.53
PDLIM5-219ENST00000514743 PIEZO1Q92508 2521 aa5.5□□□□□ -1.53
PDLIM5-219ENST00000514743 IGHV4-38-2P0DP08 117 aa5.49□□□□□ -1.53
PDLIM5-219ENST00000514743 Q6ZS46 218 aa5.49□□□□□ -1.53
PDLIM5-219ENST00000514743 SPG11Q96JI7 2443 aa5.49□□□□□ -1.53
PDLIM5-219ENST00000514743 F8WEM9 126 aa5.49□□□□□ -1.53
PDLIM5-219ENST00000514743 CNFNQ9BYD5 112 aa5.49□□□□□ -1.53
PDLIM5-219ENST00000514743 ZNF469Q96JG9 3925 aaPredicted RBP5.48□□□□□ -1.53
PDLIM5-219ENST00000514743 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.48□□□□□ -1.53
PDLIM5-219ENST00000514743 TMEM256-PLSCR3K7ERE1 68 aa5.48□□□□□ -1.53
PDLIM5-219ENST00000514743 CCL19Q99731 98 aa5.48□□□□□ -1.53
PDLIM5-219ENST00000514743 ICOSQ9Y6W8 199 aa5.48□□□□□ -1.53
PDLIM5-219ENST00000514743 AKAP9Q99996 3911 aa5.48□□□□□ -1.53
PDLIM5-219ENST00000514743 IGHV4-30-2A0A087WSY4 118 aa5.48□□□□□ -1.53
PDLIM5-219ENST00000514743 TRBV12-3P01733 135 aa5.48□□□□□ -1.53
PDLIM5-219ENST00000514743 Q6JHZ5 121 aa5.48□□□□□ -1.53
PDLIM5-219ENST00000514743 C11orf21Q9P2W6 132 aa5.48□□□□□ -1.53
PDLIM5-219ENST00000514743 USP9XQ93008 2570 aaPredicted RBP5.48□□□□□ -1.53
PDLIM5-219ENST00000514743 TMEM223A0PJW6 202 aa5.47□□□□□ -1.53
PDLIM5-219ENST00000514743 GPHB5Q86YW7 130 aa5.47□□□□□ -1.53
PDLIM5-219ENST00000514743 Q8N2B8 174 aa5.47□□□□□ -1.53
PDLIM5-219ENST00000514743 RNF185Q96GF1 192 aa5.47□□□□□ -1.53
PDLIM5-219ENST00000514743 IGKV3D-20A0A0C4DH25 116 aa5.47□□□□□ -1.53
PDLIM5-219ENST00000514743 F6UB75 175 aa5.47□□□□□ -1.53
PDLIM5-219ENST00000514743 M0R378 163 aa5.47□□□□□ -1.53
PDLIM5-219ENST00000514743 LST1O00453 97 aa5.47□□□□□ -1.53
PDLIM5-219ENST00000514743 ATP5EP56381 51 aaPredicted RBP5.47□□□□□ -1.53
PDLIM5-219ENST00000514743 FAM229BQ4G0N7 80 aa5.47□□□□□ -1.53
PDLIM5-219ENST00000514743 DAND5Q8N907 189 aa5.47□□□□□ -1.53
PDLIM5-219ENST00000514743 A0A087WZ39 114 aa5.47□□□□□ -1.53
PDLIM5-219ENST00000514743 EIF4EBP3O60516 100 aaPredicted RBP5.47□□□□□ -1.53
PDLIM5-219ENST00000514743 COX6B1P14854 86 aa5.47□□□□□ -1.53
PDLIM5-219ENST00000514743 DOPEY1Q5JWR5 2465 aa5.46□□□□□ -1.53
PDLIM5-219ENST00000514743 TRAV12-3A0A0B4J271 114 aa5.46□□□□□ -1.53
PDLIM5-219ENST00000514743 A6NDX4 124 aa5.46□□□□□ -1.53
PDLIM5-219ENST00000514743 DEFB1P60022 68 aa5.46□□□□□ -1.53
PDLIM5-219ENST00000514743 PAPPA-AS1Q5QFB9 102 aa5.46□□□□□ -1.53
PDLIM5-219ENST00000514743 VSIG2Q96IQ7 327 aa5.46□□□□□ -1.53
PDLIM5-219ENST00000514743 TRAV23DV6A0A075B6W5 121 aa5.46□□□□□ -1.54
PDLIM5-219ENST00000514743 NBPF19A0A087WUL8 3843 aa5.46□□□□□ -1.54
PDLIM5-219ENST00000514743 ZNF73O43830 326 aaPredicted RBP5.46□□□□□ -1.54
PDLIM5-219ENST00000514743 TRGV3P03979 118 aa5.46□□□□□ -1.54
PDLIM5-219ENST00000514743 ZANQ9Y493 2812 aa5.46□□□□□ -1.54
PDLIM5-219ENST00000514743 IGKV3-7A0A075B6H7 116 aa5.46□□□□□ -1.54
PDLIM5-219ENST00000514743 IGHV7-4-1A0A0J9YVY3 117 aa5.46□□□□□ -1.54
PDLIM5-219ENST00000514743 SOCS3O14543 225 aa5.46□□□□□ -1.54
PDLIM5-219ENST00000514743 PRR9Q5T870 116 aa5.46□□□□□ -1.54
PDLIM5-219ENST00000514743 C9orf47Q6ZRZ4 202 aa5.46□□□□□ -1.54
PDLIM5-219ENST00000514743 DEFB104AQ8WTQ1 72 aa5.46□□□□□ -1.54
PDLIM5-219ENST00000514743 SNURFQ9Y675 71 aa5.46□□□□□ -1.54
PDLIM5-219ENST00000514743 UBR5O95071 2799 aaPredicted RBP5.45□□□□□ -1.54
PDLIM5-219ENST00000514743 TRBV27A0A0K0K1C4 114 aa5.45□□□□□ -1.54
PDLIM5-219ENST00000514743 LINC01546A6NGU7 62 aa5.45□□□□□ -1.54
PDLIM5-219ENST00000514743 H3BUX3 64 aa5.45□□□□□ -1.54
PDLIM5-219ENST00000514743 DNAL4O96015 105 aa5.45□□□□□ -1.54
PDLIM5-219ENST00000514743 LY6EQ16553 131 aa5.45□□□□□ -1.54
PDLIM5-219ENST00000514743 BLCAPP62952 87 aa5.45□□□□□ -1.54
PDLIM5-219ENST00000514743 C14orf178Q8N769 122 aaPredicted RBP5.45□□□□□ -1.54
PDLIM5-219ENST00000514743 KLK15Q9H2R5 256 aa5.45□□□□□ -1.54
PDLIM5-219ENST00000514743 UBE2D4Q9Y2X8 147 aa5.45□□□□□ -1.54
PDLIM5-219ENST00000514743 X6R8D5 127 aa5.45□□□□□ -1.54
PDLIM5-219ENST00000514743 TRAV12-1A0A0B4J245 112 aa5.44□□□□□ -1.54
PDLIM5-219ENST00000514743 MSMBP08118 114 aa5.44□□□□□ -1.54
PDLIM5-219ENST00000514743 MXRA5Q9NR99 2828 aa5.44□□□□□ -1.54
PDLIM5-219ENST00000514743 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.44□□□□□ -1.544e-6■□□□□ 9.7
PDLIM5-219ENST00000514743 NDUFA4O00483 81 aa5.44□□□□□ -1.54
PDLIM5-219ENST00000514743 NXPH4O95158 308 aa5.44□□□□□ -1.54
PDLIM5-219ENST00000514743 IGLV1-40P01703 118 aa5.44□□□□□ -1.54
PDLIM5-219ENST00000514743 FAM222AQ5U5X8 452 aa5.44□□□□□ -1.54
PDLIM5-219ENST00000514743 SPATA3Q8NHX4 192 aa5.44□□□□□ -1.54
PDLIM5-219ENST00000514743 RMI2Q96E14 147 aa5.44□□□□□ -1.54
PDLIM5-219ENST00000514743 CR1P17927 2039 aa5.44□□□□□ -1.54
PDLIM5-219ENST00000514743 H3BUA1 57 aa5.44□□□□□ -1.54
PDLIM5-219ENST00000514743 VCYO14598 125 aa5.44□□□□□ -1.54
PDLIM5-219ENST00000514743 MUSTN1Q8IVN3 82 aa5.44□□□□□ -1.54
PDLIM5-219ENST00000514743 A0A096LNT2 108 aa5.43□□□□□ -1.54
PDLIM5-219ENST00000514743 UBE2L6O14933 153 aa5.43□□□□□ -1.54
PDLIM5-219ENST00000514743 CUBNO60494 3623 aa5.43□□□□□ -1.54
PDLIM5-219ENST00000514743 USP24Q9UPU5 2620 aa5.43□□□□□ -1.54
PDLIM5-219ENST00000514743 TRAV13-2A0A0B4J235 113 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms