RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 KLF7O75840 302 aaPredicted RBP1.49□□□□□ -2.17
TRAPPC13-208ENST00000505553 WFDC10AQ9H1F0 79 aa1.49□□□□□ -2.17
TRAPPC13-208ENST00000505553 MYH4Q9Y623 1939 aa1.49□□□□□ -2.17
TRAPPC13-208ENST00000505553 SCN3AQ9NY46 2000 aa1.49□□□□□ -2.17
TRAPPC13-208ENST00000505553 MED12LQ86YW9 2145 aa1.49□□□□□ -2.17
TRAPPC13-208ENST00000505553 GOLGA4Q13439 2230 aaKnown RBP1.49□□□□□ -2.17
TRAPPC13-208ENST00000505553 WDFY3Q8IZQ1 3526 aa1.49□□□□□ -2.17
TRAPPC13-208ENST00000505553 NF1P21359 2839 aa1.49□□□□□ -2.17
TRAPPC13-208ENST00000505553 TNRC6BQ9UPQ9 1833 aaKnown RBP1.49□□□□□ -2.17
TRAPPC13-208ENST00000505553 FREM2Q5SZK8 3169 aa1.49□□□□□ -2.17
TRAPPC13-208ENST00000505553 DNHD1Q96M86 4753 aa1.49□□□□□ -2.17
TRAPPC13-208ENST00000505553 RHOHQ15669 191 aa1.49□□□□□ -2.17
TRAPPC13-208ENST00000505553 SPATA45Q537H7 98 aa1.49□□□□□ -2.17
TRAPPC13-208ENST00000505553 SCIMPQ6UWF3 145 aa1.49□□□□□ -2.17
TRAPPC13-208ENST00000505553 CCDC167Q9P0B6 97 aa1.49□□□□□ -2.17
TRAPPC13-208ENST00000505553 BOKQ9UMX3 212 aaPredicted RBP1.49□□□□□ -2.17
TRAPPC13-208ENST00000505553 KIAA1549Q9HCM3 1950 aa1.48□□□□□ -2.17
TRAPPC13-208ENST00000505553 CELSR3Q9NYQ7 3312 aa1.48□□□□□ -2.17
TRAPPC13-208ENST00000505553 CENPEQ02224 2701 aa1.48□□□□□ -2.17
TRAPPC13-208ENST00000505553 ITPR2Q14571 2701 aa1.48□□□□□ -2.17
TRAPPC13-208ENST00000505553 ANKHD1Q8IWZ3 2542 aaKnown RBP1.48□□□□□ -2.17
TRAPPC13-208ENST00000505553 KIAA1549LQ6ZVL6 1849 aa1.48□□□□□ -2.17
TRAPPC13-208ENST00000505553 NBEAL1Q6ZS30 2694 aa1.48□□□□□ -2.17
TRAPPC13-208ENST00000505553 TANC2Q9HCD6 1990 aa1.48□□□□□ -2.17
TRAPPC13-208ENST00000505553 TRAV23DV6A0A075B6W5 121 aa1.48□□□□□ -2.17
TRAPPC13-208ENST00000505553 NBPF19A0A087WUL8 3843 aa1.48□□□□□ -2.17
TRAPPC13-208ENST00000505553 TMEM30CPA0ZSE6 113 aa1.48□□□□□ -2.17
TRAPPC13-208ENST00000505553 J3QLW9 94 aa1.48□□□□□ -2.17
TRAPPC13-208ENST00000505553 FREM3P0C091 2139 aa1.48□□□□□ -2.17
TRAPPC13-208ENST00000505553 S100A1P23297 94 aa1.48□□□□□ -2.17
TRAPPC13-208ENST00000505553 GUCA1AP43080 201 aaPredicted RBP1.48□□□□□ -2.17
TRAPPC13-208ENST00000505553 SLC25A26Q70HW3 274 aa1.48□□□□□ -2.17
TRAPPC13-208ENST00000505553 CGREF1Q99674 301 aa1.48□□□□□ -2.17
TRAPPC13-208ENST00000505553 LINC00470Q9BZP3 86 aa1.48□□□□□ -2.17
TRAPPC13-208ENST00000505553 NBASA2RRP1 2371 aa1.47□□□□□ -2.17
TRAPPC13-208ENST00000505553 RELNP78509 3460 aa1.47□□□□□ -2.17
TRAPPC13-208ENST00000505553 ZFHX3Q15911 3703 aa1.47□□□□□ -2.17
TRAPPC13-208ENST00000505553 A0A0G2JMM0 328 aa1.47□□□□□ -2.17
TRAPPC13-208ENST00000505553 FAM92AA1XBS5 289 aa1.47□□□□□ -2.17
TRAPPC13-208ENST00000505553 IGF2P01344 180 aa1.47□□□□□ -2.17
TRAPPC13-208ENST00000505553 IGHV3-30P01768 117 aa1.47□□□□□ -2.17
TRAPPC13-208ENST00000505553 APODP05090 189 aa1.47□□□□□ -2.17
TRAPPC13-208ENST00000505553 GYPBP06028 91 aa1.47□□□□□ -2.17
TRAPPC13-208ENST00000505553 IGHV3-30-5P0DP03 117 aa1.47□□□□□ -2.17
TRAPPC13-208ENST00000505553 PYYP10082 97 aa1.47□□□□□ -2.17
TRAPPC13-208ENST00000505553 PDE6GP18545 87 aa1.47□□□□□ -2.17
TRAPPC13-208ENST00000505553 POLR2JP52435 117 aaKnown RBP1.47□□□□□ -2.17
TRAPPC13-208ENST00000505553 RRAS2P62070 204 aaPredicted RBP1.47□□□□□ -2.17
TRAPPC13-208ENST00000505553 EMX2Q04743 252 aa1.47□□□□□ -2.17
TRAPPC13-208ENST00000505553 DYNLRB2Q8TF09 96 aa1.47□□□□□ -2.17
TRAPPC13-208ENST00000505553 PPDPFLQ8WWR9 84 aa1.47□□□□□ -2.17
TRAPPC13-208ENST00000505553 LIMD2Q9BT23 127 aa1.47□□□□□ -2.17
TRAPPC13-208ENST00000505553 PSMG3Q9BT73 122 aaPredicted RBP1.47□□□□□ -2.17
TRAPPC13-208ENST00000505553 RP1L1Q8IWN7 2480 aaPredicted RBP1.47□□□□□ -2.17
TRAPPC13-208ENST00000505553 CCDC168Q8NDH2 2452 aa1.47□□□□□ -2.17
TRAPPC13-208ENST00000505553 ATRQ13535 2644 aa1.46□□□□□ -2.17
TRAPPC13-208ENST00000505553 UTP20O75691 2785 aaKnown RBP1.46□□□□□ -2.18
TRAPPC13-208ENST00000505553 ZFC3H1O60293 1989 aaKnown RBP1.46□□□□□ -2.18
TRAPPC13-208ENST00000505553 LRBAP50851 2863 aa1.46□□□□□ -2.18
TRAPPC13-208ENST00000505553 A0A1B0GV90 55 aa1.46□□□□□ -2.18
TRAPPC13-208ENST00000505553 FAM25AB3EWG3 89 aa1.46□□□□□ -2.18
TRAPPC13-208ENST00000505553 FAM25CB3EWG5 89 aa1.46□□□□□ -2.18
TRAPPC13-208ENST00000505553 FAM25GB3EWG6 89 aa1.46□□□□□ -2.18
TRAPPC13-208ENST00000505553 IGLV3-1P01715 115 aa1.46□□□□□ -2.18
TRAPPC13-208ENST00000505553 ANGP03950 147 aaKnown RBP1.46□□□□□ -2.18
TRAPPC13-208ENST00000505553 KRTAP12-4P60329 112 aa1.46□□□□□ -2.18
TRAPPC13-208ENST00000505553 UNQ5815/PRO19632Q6UWF5 114 aa1.46□□□□□ -2.18
TRAPPC13-208ENST00000505553 COL12A1Q99715 3063 aa1.46□□□□□ -2.18
TRAPPC13-208ENST00000505553 STAB1Q9NY15 2570 aa1.46□□□□□ -2.18
TRAPPC13-208ENST00000505553 MYOFQ9NZM1 2061 aa1.46□□□□□ -2.18
TRAPPC13-208ENST00000505553 OTOGQ6ZRI0 2925 aa1.45□□□□□ -2.18
TRAPPC13-208ENST00000505553 PDCD11Q14690 1871 aaKnown RBP1.45□□□□□ -2.18
TRAPPC13-208ENST00000505553 HIVEP3Q5T1R4 2406 aa1.45□□□□□ -2.18
TRAPPC13-208ENST00000505553 MYH7P12883 1935 aa1.45□□□□□ -2.18
TRAPPC13-208ENST00000505553 KNTC1P50748 2209 aa1.45□□□□□ -2.18
TRAPPC13-208ENST00000505553 EML5Q05BV3 1969 aa1.45□□□□□ -2.18
TRAPPC13-208ENST00000505553 LINC00587B1AMM8 73 aa1.45□□□□□ -2.18
TRAPPC13-208ENST00000505553 GNG7O60262 68 aa1.45□□□□□ -2.18
TRAPPC13-208ENST00000505553 SPCS2Q15005 226 aa1.45□□□□□ -2.18
TRAPPC13-208ENST00000505553 OCIAD2Q56VL3 154 aa1.45□□□□□ -2.18
TRAPPC13-208ENST00000505553 LINC01545Q5VT33 79 aa1.45□□□□□ -2.18
TRAPPC13-208ENST00000505553 KCNRGQ8N5I3 272 aa1.45□□□□□ -2.18
TRAPPC13-208ENST00000505553 DMAC1Q96GE9 116 aa1.45□□□□□ -2.18
TRAPPC13-208ENST00000505553 ODF3Q96PU9 254 aa1.45□□□□□ -2.18
TRAPPC13-208ENST00000505553 KRTAP4-1Q9BYQ7 146 aa1.45□□□□□ -2.18
TRAPPC13-208ENST00000505553 CSMD1Q96PZ7 3565 aa1.45□□□□□ -2.18
TRAPPC13-208ENST00000505553 HIVEP1P15822 2718 aa1.45□□□□□ -2.18
TRAPPC13-208ENST00000505553 DIDO1Q9BTC0 2240 aaKnown RBP1.45□□□□□ -2.18
TRAPPC13-208ENST00000505553 MGAQ8IWI9 3026 aa1.44□□□□□ -2.18
TRAPPC13-208ENST00000505553 PI4KAP42356 2102 aa1.44□□□□□ -2.18
TRAPPC13-208ENST00000505553 TRAV17A0A0B4J275 112 aa1.44□□□□□ -2.18
TRAPPC13-208ENST00000505553 NUPR2A6NF83 97 aa1.44□□□□□ -2.18
TRAPPC13-208ENST00000505553 M0R129 80 aa1.44□□□□□ -2.18
TRAPPC13-208ENST00000505553 IL7P13232 177 aa1.44□□□□□ -2.18
TRAPPC13-208ENST00000505553 COX6B1P14854 86 aa1.44□□□□□ -2.18
TRAPPC13-208ENST00000505553 CSAG1Q6PB30 78 aa1.44□□□□□ -2.18
TRAPPC13-208ENST00000505553 LYPD5Q6UWN5 251 aa1.44□□□□□ -2.18
TRAPPC13-208ENST00000505553 Q6ZUT4 128 aa1.44□□□□□ -2.18
TRAPPC13-208ENST00000505553 VSTM2AQ8TAG5 236 aa1.44□□□□□ -2.18
TRAPPC13-208ENST00000505553 SDF2Q99470 211 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms