RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 TRAV10A0A0B4J240 114 aa4.24□□□□□ -1.73
LINC01340-201ENST00000504012 hDV103S1A0JD37 113 aa4.24□□□□□ -1.73
LINC01340-201ENST00000504012 ODF3BA8MYP8 253 aa4.24□□□□□ -1.73
LINC01340-201ENST00000504012 SMIM1B2RUZ4 78 aa4.24□□□□□ -1.73
LINC01340-201ENST00000504012 CCL24O00175 119 aa4.24□□□□□ -1.73
LINC01340-201ENST00000504012 UNQ9165/PRO28630Q6UXU0 137 aa4.24□□□□□ -1.73
LINC01340-201ENST00000504012 SPATA3Q8NHX4 192 aa4.24□□□□□ -1.73
LINC01340-201ENST00000504012 KRTAP9-9Q9BYP9 154 aa4.24□□□□□ -1.73
LINC01340-201ENST00000504012 KRTAP9-4Q9BYQ2 154 aa4.24□□□□□ -1.73
LINC01340-201ENST00000504012 SND1-IT1Q9HBX3 110 aa4.24□□□□□ -1.73
LINC01340-201ENST00000504012 MINOS1-NBL1R4GNA1 71 aa4.24□□□□□ -1.73
LINC01340-201ENST00000504012 ABCA1O95477 2261 aa4.24□□□□□ -1.73
LINC01340-201ENST00000504012 SRCAPQ6ZRS2 3230 aa4.23□□□□□ -1.73
LINC01340-201ENST00000504012 CACNA1GO43497 2377 aa4.23□□□□□ -1.73
LINC01340-201ENST00000504012 K7EMT4 169 aa4.23□□□□□ -1.73
LINC01340-201ENST00000504012 NDUFA4O00483 81 aa4.23□□□□□ -1.73
LINC01340-201ENST00000504012 IGHV3-23P01764 117 aa4.23□□□□□ -1.73
LINC01340-201ENST00000504012 IGHV4-38-2P0DP08 117 aa4.23□□□□□ -1.73
LINC01340-201ENST00000504012 NDPQ00604 133 aa4.23□□□□□ -1.73
LINC01340-201ENST00000504012 NREPQ16612 68 aa4.23□□□□□ -1.73
LINC01340-201ENST00000504012 LINC00242Q5T6M2 205 aa4.23□□□□□ -1.73
LINC01340-201ENST00000504012 Q6ZQT0 140 aa4.23□□□□□ -1.73
LINC01340-201ENST00000504012 PHF5AQ7RTV0 110 aaKnown RBP4.23□□□□□ -1.73
LINC01340-201ENST00000504012 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
LINC01340-201ENST00000504012 C6orf223Q8N319 242 aa4.23□□□□□ -1.73
LINC01340-201ENST00000504012 MPLKIPQ8TAP9 179 aa4.23□□□□□ -1.73
LINC01340-201ENST00000504012 IGHV1OR15-1A0A075B7D0 117 aa4.22□□□□□ -1.73
LINC01340-201ENST00000504012 IGHV3-38A0A0C4DH36 116 aa4.22□□□□□ -1.73
LINC01340-201ENST00000504012 TRBV6-4A0A1B0GX49 114 aa4.22□□□□□ -1.73
LINC01340-201ENST00000504012 UBE2BP63146 152 aa4.22□□□□□ -1.73
LINC01340-201ENST00000504012 FAM229BQ4G0N7 80 aa4.22□□□□□ -1.73
LINC01340-201ENST00000504012 CLEC19AQ6UXS0 136 aa4.22□□□□□ -1.73
LINC01340-201ENST00000504012 Q75L30 129 aa4.22□□□□□ -1.73
LINC01340-201ENST00000504012 Q8N814 137 aa4.22□□□□□ -1.73
LINC01340-201ENST00000504012 C11orf72Q8NBR9 251 aa4.22□□□□□ -1.73
LINC01340-201ENST00000504012 WFDC9Q8NEX5 89 aa4.22□□□□□ -1.73
LINC01340-201ENST00000504012 C11orf45Q8TAV5 145 aa4.22□□□□□ -1.73
LINC01340-201ENST00000504012 DNAJC13O75165 2243 aa4.22□□□□□ -1.73
LINC01340-201ENST00000504012 IGHV3OR16-12A0A075B7B8 117 aa4.21□□□□□ -1.74
LINC01340-201ENST00000504012 IGHV3-35A0A0C4DH35 117 aa4.21□□□□□ -1.74
LINC01340-201ENST00000504012 COX7A1P24310 79 aa4.21□□□□□ -1.74
LINC01340-201ENST00000504012 COX6A2Q02221 97 aa4.21□□□□□ -1.74
LINC01340-201ENST00000504012 FAM74A4Q5TZK3 123 aa4.21□□□□□ -1.74
LINC01340-201ENST00000504012 Q6ZVQ6 151 aa4.21□□□□□ -1.74
LINC01340-201ENST00000504012 Q8N3U1 123 aa4.21□□□□□ -1.74
LINC01340-201ENST00000504012 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.21□□□□□ -1.74
LINC01340-201ENST00000504012 Q8N9W7 124 aa4.21□□□□□ -1.74
LINC01340-201ENST00000504012 CYP4F30PQ9H0H9 118 aa4.21□□□□□ -1.74
LINC01340-201ENST00000504012 ESM1Q9NQ30 184 aa4.21□□□□□ -1.74
LINC01340-201ENST00000504012 RBM12B-AS1Q9P1G2 102 aa4.21□□□□□ -1.74
LINC01340-201ENST00000504012 LINC00588Q9Y4M8 146 aa4.21□□□□□ -1.74
LINC01340-201ENST00000504012 DNAH12Q6ZR08 3092 aa4.21□□□□□ -1.74
LINC01340-201ENST00000504012 ARHGAP32A7KAX9 2087 aa4.2□□□□□ -1.74
LINC01340-201ENST00000504012 EP400Q96L91 3159 aa4.2□□□□□ -1.74
LINC01340-201ENST00000504012 IGHV3-66A0A0C4DH42 116 aa4.2□□□□□ -1.74
LINC01340-201ENST00000504012 LCE6AA0A183 80 aa4.2□□□□□ -1.74
LINC01340-201ENST00000504012 K7EQD1 137 aa4.2□□□□□ -1.74
LINC01340-201ENST00000504012 BPY2O14599 106 aa4.2□□□□□ -1.74
LINC01340-201ENST00000504012 LY6HO94772 140 aa4.2□□□□□ -1.74
LINC01340-201ENST00000504012 APOC4P55056 127 aa4.2□□□□□ -1.74
LINC01340-201ENST00000504012 CCL18P55774 89 aa4.2□□□□□ -1.74
LINC01340-201ENST00000504012 DEFB114Q30KQ6 69 aa4.2□□□□□ -1.74
LINC01340-201ENST00000504012 A0A087WZ39 114 aa4.19□□□□□ -1.74
LINC01340-201ENST00000504012 H3BUA1 57 aa4.19□□□□□ -1.74
LINC01340-201ENST00000504012 M0R378 163 aa4.19□□□□□ -1.74
LINC01340-201ENST00000504012 UBE2L6O14933 153 aa4.19□□□□□ -1.74
LINC01340-201ENST00000504012 IGHV3-53P01767 116 aa4.19□□□□□ -1.74
LINC01340-201ENST00000504012 IGHV4-31P0DP07 118 aa4.19□□□□□ -1.74
LINC01340-201ENST00000504012 ATP11AUNQ6ZP68 121 aa4.19□□□□□ -1.74
LINC01340-201ENST00000504012 Q6ZRP5 223 aa4.19□□□□□ -1.74
LINC01340-201ENST00000504012 NTM-AS1Q6ZSK4 140 aa4.19□□□□□ -1.74
LINC01340-201ENST00000504012 COX7B2Q8TF08 81 aa4.19□□□□□ -1.74
LINC01340-201ENST00000504012 LINC00467Q9BRT7 94 aa4.19□□□□□ -1.74
LINC01340-201ENST00000504012 OCR1Q9BZK8 76 aa4.19□□□□□ -1.74
LINC01340-201ENST00000504012 GOLGB1Q14789 3259 aaKnown RBP4.18□□□□□ -1.74
LINC01340-201ENST00000504012 IGHV3OR16-8A0A075B7F1 116 aa4.18□□□□□ -1.74
LINC01340-201ENST00000504012 TRBV10-1A0A0K0K1A3 114 aa4.18□□□□□ -1.74
LINC01340-201ENST00000504012 HAMPP81172 84 aa4.18□□□□□ -1.74
LINC01340-201ENST00000504012 DEFB104AQ8WTQ1 72 aa4.18□□□□□ -1.74
LINC01340-201ENST00000504012 USMG5Q96IX5 58 aa4.18□□□□□ -1.74
LINC01340-201ENST00000504012 CACNA1EQ15878 2313 aa4.18□□□□□ -1.74
LINC01340-201ENST00000504012 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.17□□□□□ -1.74
LINC01340-201ENST00000504012 IGHV3OR16-13A0A075B7E8 117 aa4.17□□□□□ -1.74
LINC01340-201ENST00000504012 IGHV3-74A0A0B4J1X5 117 aa4.17□□□□□ -1.74
LINC01340-201ENST00000504012 EPOPA6NHQ4 379 aa4.17□□□□□ -1.74
LINC01340-201ENST00000504012 K7EQG2 157 aa4.17□□□□□ -1.74
LINC01340-201ENST00000504012 SLPIP03973 132 aa4.17□□□□□ -1.74
LINC01340-201ENST00000504012 GNLYP22749 145 aa4.17□□□□□ -1.74
LINC01340-201ENST00000504012 UBE2AP49459 152 aa4.17□□□□□ -1.74
LINC01340-201ENST00000504012 KRTAP4-12Q9BQ66 201 aa4.17□□□□□ -1.74
LINC01340-201ENST00000504012 CADP27708 2225 aa4.17□□□□□ -1.74
LINC01340-201ENST00000504012 CENPFP49454 3210 aa4.16□□□□□ -1.74
LINC01340-201ENST00000504012 IGHV3-49A0A0A0MS15 119 aa4.16□□□□□ -1.74
LINC01340-201ENST00000504012 TRBV6-8A0A0A6YYG3 113 aa4.16□□□□□ -1.74
LINC01340-201ENST00000504012 TRAV22A0A0B4J277 110 aa4.16□□□□□ -1.74
LINC01340-201ENST00000504012 A0A1B0GW54 56 aa4.16□□□□□ -1.74
LINC01340-201ENST00000504012 ATP6V0E1O15342 81 aa4.16□□□□□ -1.74
LINC01340-201ENST00000504012 LINC00158P58513 81 aa4.16□□□□□ -1.74
LINC01340-201ENST00000504012 ELOF1P60002 83 aaKnown RBP4.16□□□□□ -1.74
LINC01340-201ENST00000504012 SYCNQ0VAF6 134 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms