RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 CYP4F30PQ9H0H9 118 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 CDC42SE2Q9NRR3 84 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 TMEM14BQ9NUH8 114 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 TMEM14CQ9P0S9 112 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 UBE2D4Q9Y2X8 147 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 ARL2-SNX15V9GYD0 113 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 KIAA0100Q14667 2235 aaKnown RBP0.85□□□□□ -2.27
LMNB1-207ENST00000494185 IQGAP3Q86VI3 1631 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 MROH1Q8NDA8 1641 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 PTPRMP28827 1452 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 ZGRF1Q86YA3 2104 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 MAP2P11137 1827 aaKnown RBP0.85□□□□□ -2.27
LMNB1-207ENST00000494185 ASXL1Q8IXJ9 1541 aa0.84□□□□□ -2.27
LMNB1-207ENST00000494185 KNDC1Q76NI1 1749 aa0.84□□□□□ -2.27
LMNB1-207ENST00000494185 MUC6Q6W4X9 2439 aa0.84□□□□□ -2.27
LMNB1-207ENST00000494185 ABCA4P78363 2273 aa0.84□□□□□ -2.27
LMNB1-207ENST00000494185 CASZ1Q86V15 1759 aa0.84□□□□□ -2.27
LMNB1-207ENST00000494185 TRBV25-1A0A075B6N4 114 aa0.84□□□□□ -2.27
LMNB1-207ENST00000494185 LOC101927531A0A1B0GV80 90 aa0.84□□□□□ -2.27
LMNB1-207ENST00000494185 F8WEM9 126 aa0.84□□□□□ -2.27
LMNB1-207ENST00000494185 CHKB-CPT1BH3BT56 60 aa0.84□□□□□ -2.27
LMNB1-207ENST00000494185 IGHV3-30P01768 117 aa0.84□□□□□ -2.27
LMNB1-207ENST00000494185 IGHV3-30-5P0DP03 117 aa0.84□□□□□ -2.27
LMNB1-207ENST00000494185 CSAG1Q6PB30 78 aa0.84□□□□□ -2.27
LMNB1-207ENST00000494185 SMIM5Q71RC9 77 aa0.84□□□□□ -2.27
LMNB1-207ENST00000494185 BAGE3Q86Y29 109 aa0.84□□□□□ -2.27
LMNB1-207ENST00000494185 BAGE2Q86Y30 109 aa0.84□□□□□ -2.27
LMNB1-207ENST00000494185 Q8N6K4 173 aa0.84□□□□□ -2.27
LMNB1-207ENST00000494185 IFI27L1Q96BM0 104 aa0.84□□□□□ -2.27
LMNB1-207ENST00000494185 CC2D2AQ9P2K1 1620 aa0.84□□□□□ -2.28
LMNB1-207ENST00000494185 CD163L1Q9NR16 1453 aa0.84□□□□□ -2.28
LMNB1-207ENST00000494185 COL4A1P02462 1669 aa0.84□□□□□ -2.28
LMNB1-207ENST00000494185 TRPM7Q96QT4 1865 aa0.84□□□□□ -2.28
LMNB1-207ENST00000494185 ABCC1P33527 1531 aa0.84□□□□□ -2.28
LMNB1-207ENST00000494185 ABCC2Q92887 1545 aa0.84□□□□□ -2.28
LMNB1-207ENST00000494185 ARHGEF12Q9NZN5 1544 aa0.84□□□□□ -2.28
LMNB1-207ENST00000494185 MYOFQ9NZM1 2061 aa0.84□□□□□ -2.28
LMNB1-207ENST00000494185 MYH4Q9Y623 1939 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 HEATR1Q9H583 2144 aaKnown RBP0.83□□□□□ -2.28
LMNB1-207ENST00000494185 DIP2AQ14689 1571 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 LTN1O94822 1766 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 EXPH5Q8NEV8 1989 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 CASP8AP2Q9UKL3 1982 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 TARBP1Q13395 1621 aaKnown RBP0.83□□□□□ -2.28
LMNB1-207ENST00000494185 SDK1Q7Z5N4 2213 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 A0A0D9SFI3 127 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 A0A1B0GWA3 101 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 A6NIN4 97 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 CEBPZOSA8MTT3 80 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 JMJD7-PLA2G4BH0Y9G9 81 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 PRB1P04280 392 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 HMGN2P05204 90 aaKnown RBP0.83□□□□□ -2.28
LMNB1-207ENST00000494185 SPINT3P49223 89 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 C10orf128Q5T292 105 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 C6orf201Q7Z4U5 140 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 TOMM5Q8N4H5 51 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 LIMD2Q9BT23 127 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 PRO1854Q9UHT4 67 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 C22orf24Q9Y442 160 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 PXDNQ92626 1479 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 DOCK11Q5JSL3 2073 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 SPTBP11277 2137 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 TET1Q8NFU7 2136 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 ABCC6O95255 1503 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 HMGXB3Q12766 1538 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 KCPQ6ZWJ8 1503 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 INTS1Q8N201 2190 aaKnown RBP0.83□□□□□ -2.28
LMNB1-207ENST00000494185 KDM3BQ7LBC6 1761 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 PLXNC1O60486 1568 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 LAMC3Q9Y6N6 1575 aa0.83□□□□□ -2.28
LMNB1-207ENST00000494185 KIAA1549LQ6ZVL6 1849 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 DOCK2Q92608 1830 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 ITSN2Q9NZM3 1697 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 PI4KAP42356 2102 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 IQSEC2Q5JU85 1478 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 MON2Q7Z3U7 1717 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 MYO5CQ9NQX4 1742 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 TRAV12-3A0A0B4J271 114 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 TRBV10-3A0A0K0K1G6 114 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 K7EMI3 77 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 IFI6P09912 130 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 PDE6GP18545 87 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 IFI27P40305 119 aaPredicted RBP0.82□□□□□ -2.28
LMNB1-207ENST00000494185 UBE2D1P51668 147 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 SMIM11AP58511 58 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 SSBP1Q04837 148 aaKnown RBP0.82□□□□□ -2.28
LMNB1-207ENST00000494185 PSMG4Q5JS54 123 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 Q6JHZ5 121 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 ZNF818PQ6ZRF7 136 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 PPP1R1CQ8WVI7 109 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 OBSCN-AS1Q96MR7 158 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 DYNLRB1Q9NP97 96 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 PLAC8Q9NZF1 115 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 EML5Q05BV3 1969 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 SORL1Q92673 2214 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 URB2Q14146 1524 aaKnown RBP0.82□□□□□ -2.28
LMNB1-207ENST00000494185 CFAP74Q9C0B2 1584 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 LRP5O75197 1615 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 KIF14Q15058 1648 aa0.82□□□□□ -2.28
LMNB1-207ENST00000494185 ABCA9Q8IUA7 1624 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms