RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 SMIM3Q9BZL3 60 aa2.97□□□□□ -1.93
UPF3A-205ENST00000479712 TMEM167BQ9NRX6 74 aa2.97□□□□□ -1.93
UPF3A-205ENST00000479712 A0A1W2PRE2 83 aa2.96□□□□□ -1.94
UPF3A-205ENST00000479712 HMSDA8MTL9 139 aa2.96□□□□□ -1.94
UPF3A-205ENST00000479712 G3V3Q6 166 aa2.96□□□□□ -1.94
UPF3A-205ENST00000479712 CXorf1O96002 111 aa2.96□□□□□ -1.94
UPF3A-205ENST00000479712 GPX1P07203 203 aa2.96□□□□□ -1.94
UPF3A-205ENST00000479712 OR10J4P0C629 311 aa2.96□□□□□ -1.94
UPF3A-205ENST00000479712 EMP1P54849 157 aa2.96□□□□□ -1.94
UPF3A-205ENST00000479712 TCL1AP56279 114 aa2.96□□□□□ -1.94
UPF3A-205ENST00000479712 RAB2AP61019 212 aa2.96□□□□□ -1.94
UPF3A-205ENST00000479712 RANP62826 216 aaKnown RBP2.96□□□□□ -1.94
UPF3A-205ENST00000479712 Q5BKY6 102 aa2.96□□□□□ -1.94
UPF3A-205ENST00000479712 Q6AWC8 147 aa2.96□□□□□ -1.94
UPF3A-205ENST00000479712 EXOC3-AS1Q8N2X6 119 aa2.96□□□□□ -1.94
UPF3A-205ENST00000479712 MIR7-3HGQ8N6C7 128 aa2.96□□□□□ -1.94
UPF3A-205ENST00000479712 C5orf17Q8NAS9 161 aa2.96□□□□□ -1.94
UPF3A-205ENST00000479712 CMTM2Q8TAZ6 248 aa2.96□□□□□ -1.94
UPF3A-205ENST00000479712 TCEAL7Q9BRU2 100 aa2.96□□□□□ -1.94
UPF3A-205ENST00000479712 NKX6-2Q9C056 277 aaPredicted RBP2.96□□□□□ -1.94
UPF3A-205ENST00000479712 SND1-IT1Q9HBX3 110 aa2.96□□□□□ -1.94
UPF3A-205ENST00000479712 TREM1Q9NP99 234 aa2.96□□□□□ -1.94
UPF3A-205ENST00000479712 ARL2-SNX15V9GYD0 113 aa2.96□□□□□ -1.94
UPF3A-205ENST00000479712 IGKV2-40A0A087WW87 121 aaPredicted RBP2.95□□□□□ -1.94
UPF3A-205ENST00000479712 FXYD6-FXYD2A0A087WZ82 144 aa2.95□□□□□ -1.94
UPF3A-205ENST00000479712 TRAV12-3A0A0B4J271 114 aa2.95□□□□□ -1.94
UPF3A-205ENST00000479712 A0A0D9SG52 128 aa2.95□□□□□ -1.94
UPF3A-205ENST00000479712 CTXND1A0A1B0GTU2 59 aa2.95□□□□□ -1.94
UPF3A-205ENST00000479712 PGPA6NDG6 321 aa2.95□□□□□ -1.94
UPF3A-205ENST00000479712 A8MUU9 505 aa2.95□□□□□ -1.94
UPF3A-205ENST00000479712 UMAD1C9J7I0 102 aa2.95□□□□□ -1.94
UPF3A-205ENST00000479712 SPINK4O60575 86 aa2.95□□□□□ -1.94
UPF3A-205ENST00000479712 IGKV2D-40P01614 121 aaPredicted RBP2.95□□□□□ -1.94
UPF3A-205ENST00000479712 SEC11BP0C7V7 166 aa2.95□□□□□ -1.94
UPF3A-205ENST00000479712 ARL14EPLP0DKL9 152 aa2.95□□□□□ -1.94
UPF3A-205ENST00000479712 GCHFRP30047 84 aa2.95□□□□□ -1.94
UPF3A-205ENST00000479712 EIF5AP63241 154 aaKnown RBP2.95□□□□□ -1.94
UPF3A-205ENST00000479712 RPL7L1Q6DKI1 246 aaKnown RBP2.95□□□□□ -1.94
UPF3A-205ENST00000479712 DPPA3Q6W0C5 159 aa2.95□□□□□ -1.94
UPF3A-205ENST00000479712 FAM231DQ6ZW35 169 aa2.95□□□□□ -1.94
UPF3A-205ENST00000479712 PRNTQ86SH4 94 aa2.95□□□□□ -1.94
UPF3A-205ENST00000479712 KCNRGQ8N5I3 272 aa2.95□□□□□ -1.94
UPF3A-205ENST00000479712 LINC00337Q8N6G1 96 aa2.95□□□□□ -1.94
UPF3A-205ENST00000479712 ZNRF2Q8NHG8 242 aa2.95□□□□□ -1.94
UPF3A-205ENST00000479712 PTH2Q96A98 100 aa2.95□□□□□ -1.94
UPF3A-205ENST00000479712 NOP10Q9NPE3 64 aaKnown RBP2.95□□□□□ -1.94
UPF3A-205ENST00000479712 TRAV21A0A0B4J279 112 aa2.94□□□□□ -1.94
UPF3A-205ENST00000479712 TRBV6-1A0A0K0K1D8 114 aa2.94□□□□□ -1.94
UPF3A-205ENST00000479712 ARPC5O15511 151 aa2.94□□□□□ -1.94
UPF3A-205ENST00000479712 TCRAP04437 139 aa2.94□□□□□ -1.94
UPF3A-205ENST00000479712 DEFB130BP0DP73 79 aa2.94□□□□□ -1.94
UPF3A-205ENST00000479712 DEFB130AP0DP74 79 aa2.94□□□□□ -1.94
UPF3A-205ENST00000479712 RNASE4P34096 147 aaKnown RBP2.94□□□□□ -1.94
UPF3A-205ENST00000479712 LGALSLQ3ZCW2 172 aaPredicted RBP2.94□□□□□ -1.94
UPF3A-205ENST00000479712 SAPCD1Q5SSQ6 148 aa2.94□□□□□ -1.94
UPF3A-205ENST00000479712 DNLZQ5SXM8 178 aa2.94□□□□□ -1.94
UPF3A-205ENST00000479712 AKR1C8PQ5T2L2 129 aa2.94□□□□□ -1.94
UPF3A-205ENST00000479712 PRR9Q5T870 116 aa2.94□□□□□ -1.94
UPF3A-205ENST00000479712 SLC25A34Q6PIV7 304 aa2.94□□□□□ -1.94
UPF3A-205ENST00000479712 GOLT1AQ6ZVE7 132 aa2.94□□□□□ -1.94
UPF3A-205ENST00000479712 IQCF2Q8IXL9 164 aa2.94□□□□□ -1.94
UPF3A-205ENST00000479712 TMEM75Q8N9X5 138 aa2.94□□□□□ -1.94
UPF3A-205ENST00000479712 STOML3Q8TAV4 291 aa2.94□□□□□ -1.94
UPF3A-205ENST00000479712 HIST1H2BAQ96A08 127 aa2.94□□□□□ -1.94
UPF3A-205ENST00000479712 UPK3BQ9BT76 320 aa2.94□□□□□ -1.94
UPF3A-205ENST00000479712 EPDR1Q9UM22 224 aa2.94□□□□□ -1.94
UPF3A-205ENST00000479712 TRGV2A0A075B6R0 118 aa2.93□□□□□ -1.94
UPF3A-205ENST00000479712 KANTRA0A1W2PQU2 76 aa2.93□□□□□ -1.94
UPF3A-205ENST00000479712 MAP1LC3B2A6NCE7 125 aa2.93□□□□□ -1.94
UPF3A-205ENST00000479712 GGTLC3B5MD39 225 aa2.93□□□□□ -1.94
UPF3A-205ENST00000479712 HSBP1L1C9JCN9 74 aa2.93□□□□□ -1.94
UPF3A-205ENST00000479712 F5H768 121 aa2.93□□□□□ -1.94
UPF3A-205ENST00000479712 F6UZH7 168 aa2.93□□□□□ -1.94
UPF3A-205ENST00000479712 PRM2P04554 102 aa2.93□□□□□ -1.94
UPF3A-205ENST00000479712 HTN1P15515 57 aa2.93□□□□□ -1.94
UPF3A-205ENST00000479712 HTN3P15516 51 aa2.93□□□□□ -1.94
UPF3A-205ENST00000479712 RAB5CP51148 216 aa2.93□□□□□ -1.94
UPF3A-205ENST00000479712 CCL18P55774 89 aa2.93□□□□□ -1.94
UPF3A-205ENST00000479712 FLI1Q01543 452 aaPredicted RBP2.93□□□□□ -1.94
UPF3A-205ENST00000479712 KRTAP6-3Q3LI67 103 aa2.93□□□□□ -1.94
UPF3A-205ENST00000479712 EIF5AL1Q6IS14 154 aaKnown RBP2.93□□□□□ -1.94
UPF3A-205ENST00000479712 Q6ZTI0 123 aa2.93□□□□□ -1.94
UPF3A-205ENST00000479712 TCTE3Q8IZS6 198 aa2.93□□□□□ -1.94
UPF3A-205ENST00000479712 Q8TAT8 98 aa2.93□□□□□ -1.94
UPF3A-205ENST00000479712 MBD3L1Q8WWY6 194 aa2.93□□□□□ -1.94
UPF3A-205ENST00000479712 RMI2Q96E14 147 aa2.93□□□□□ -1.94
UPF3A-205ENST00000479712 TXNDC17Q9BRA2 123 aa2.93□□□□□ -1.94
UPF3A-205ENST00000479712 MAP1LC3BQ9GZQ8 125 aa2.93□□□□□ -1.94
UPF3A-205ENST00000479712 SH3BGRL3Q9H299 93 aa2.93□□□□□ -1.94
UPF3A-205ENST00000479712 ZFP30Q9Y2G7 519 aa2.93□□□□□ -1.94
UPF3A-205ENST00000479712 TRGV1A0A0A0MS02 117 aa2.92□□□□□ -1.94
UPF3A-205ENST00000479712 TRAV1-1A0A0B4J248 108 aa2.92□□□□□ -1.94
UPF3A-205ENST00000479712 RBFOX3A6NFN3 312 aa2.92□□□□□ -1.94
UPF3A-205ENST00000479712 C9JQL5 133 aa2.92□□□□□ -1.94
UPF3A-205ENST00000479712 K7EP13 123 aa2.92□□□□□ -1.94
UPF3A-205ENST00000479712 M0R2P5 195 aa2.92□□□□□ -1.94
UPF3A-205ENST00000479712 HMGB3O15347 200 aaKnown RBP2.92□□□□□ -1.94
UPF3A-205ENST00000479712 ORM1P02763 201 aa2.92□□□□□ -1.94
UPF3A-205ENST00000479712 PFN1P07737 140 aaKnown RBP2.92□□□□□ -1.94
UPF3A-205ENST00000479712 TPT1P13693 172 aaKnown RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 185.1 ms