RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 SULT1E1P49888 294 aa-1.44□□□□□ -2.64
CALD1-218ENST00000478075 BCAP31P51572 246 aa-1.44□□□□□ -2.64
CALD1-218ENST00000478075 MYL6P60660 151 aa-1.44□□□□□ -2.64
CALD1-218ENST00000478075 NCALDP61601 193 aa-1.44□□□□□ -2.64
CALD1-218ENST00000478075 B2MP61769 119 aa-1.44□□□□□ -2.64
CALD1-218ENST00000478075 UBA52P62987 128 aaKnown RBP-1.44□□□□□ -2.64
CALD1-218ENST00000478075 MRPS15P82914 257 aaKnown RBP-1.44□□□□□ -2.64
CALD1-218ENST00000478075 ZNHIT3Q15649 155 aaPredicted RBP-1.44□□□□□ -2.64
CALD1-218ENST00000478075 VAMP3Q15836 100 aa-1.44□□□□□ -2.64
CALD1-218ENST00000478075 CDC37Q16543 378 aaPredicted RBP-1.44□□□□□ -2.64
CALD1-218ENST00000478075 NMSQ5H8A3 153 aa-1.44□□□□□ -2.64
CALD1-218ENST00000478075 TMEM78Q5T7P6 136 aa-1.44□□□□□ -2.64
CALD1-218ENST00000478075 RPL7L1Q6DKI1 246 aaKnown RBP-1.44□□□□□ -2.64
CALD1-218ENST00000478075 DNM1P34Q6PK57 102 aa-1.44□□□□□ -2.64
CALD1-218ENST00000478075 ATP6V1C2Q8NEY4 427 aa-1.44□□□□□ -2.64
CALD1-218ENST00000478075 MYOZ3Q8TDC0 251 aa-1.44□□□□□ -2.64
CALD1-218ENST00000478075 SLC35B4Q969S0 331 aa-1.44□□□□□ -2.64
CALD1-218ENST00000478075 GLTPQ9NZD2 209 aa-1.44□□□□□ -2.64
CALD1-218ENST00000478075 LINC01558Q9Y6Z2 57 aa-1.44□□□□□ -2.64
CALD1-218ENST00000478075 KDM5CP41229 1560 aa-1.44□□□□□ -2.64
CALD1-218ENST00000478075 PKD1L3Q7Z443 1732 aa-1.44□□□□□ -2.64
CALD1-218ENST00000478075 PARP4Q9UKK3 1724 aaKnown RBP-1.44□□□□□ -2.64
CALD1-218ENST00000478075 TET3O43151 1660 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 MAGI3Q5TCQ9 1506 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 EIF3AQ14152 1382 aaKnown RBP-1.45□□□□□ -2.64
CALD1-218ENST00000478075 NWD2Q9ULI1 1742 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 DNMBPQ6XZF7 1577 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 TRBV19A0A075B6N1 114 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 TRAV16A0A0A6YYK6 109 aaPredicted RBP-1.45□□□□□ -2.64
CALD1-218ENST00000478075 SUPT3HB4E1H0 165 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 PPP5D1E7EU14 171 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 M0QZ58 72 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 BANF1O75531 89 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 SPART-AS1P0CW21 52 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 HLA-DRB4P13762 266 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 MYL12AP19105 171 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 CRYBA4P53673 196 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 POLR2FP61218 127 aaKnown RBP-1.45□□□□□ -2.64
CALD1-218ENST00000478075 PSME3P61289 254 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 PCBD1P61457 104 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 PLGLB1Q02325 96 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 LEAP2Q969E1 77 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 SMIM19Q96E16 107 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 DCUN1D1Q96GG9 259 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 PARVBQ9HBI1 364 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 RPRMQ9NS64 109 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 CHMP5Q9NZZ3 219 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 COPZ2Q9P299 210 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 SMPXQ9UHP9 88 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 MRM2Q9UI43 246 aaKnown RBP-1.45□□□□□ -2.64
CALD1-218ENST00000478075 PYCARDQ9ULZ3 195 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.45□□□□□ -2.64
CALD1-218ENST00000478075 LENEPQ9Y5L5 61 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 HLA-DRB4X5D2U9 266 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 ANKRD36A6QL64 1941 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 PIK3C2BO00750 1634 aa-1.45□□□□□ -2.64
CALD1-218ENST00000478075 CRYBG1Q9Y4K1 1723 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 RGPD3A6NKT7 1758 aaPredicted RBP-1.46□□□□□ -2.64
CALD1-218ENST00000478075 RGPD4Q7Z3J3 1758 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 PIK3C2GO75747 1445 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 FAM236AA0A1B0GUQ0 79 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 FAM236BA0A1B0GV22 79 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 SFT2D2O95562 160 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 IFNA7P01567 189 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 IFNA14P01570 189 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 IFNA17P01571 189 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 OCMP0CE72 109 aaPredicted RBP-1.46□□□□□ -2.64
CALD1-218ENST00000478075 DEFB130BP0DP73 79 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 DEFB130AP0DP74 79 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 SCGB1A1P11684 91 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 FABP2P12104 132 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 ANXA8P13928 327 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 LINC00158P58513 81 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 NKAIN1Q4KMZ8 207 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 HSD17B12Q53GQ0 312 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 CLVS2Q5SYC1 327 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 ANXA8L1Q5VT79 327 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 C6orf201Q7Z4U5 140 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 SPTSSBQ8NFR3 76 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 BTF3L4Q96K17 158 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 PRO1933Q9H354 126 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 AGPAT3Q9NRZ7 376 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 NOP16Q9Y3C1 178 aaKnown RBP-1.46□□□□□ -2.64
CALD1-218ENST00000478075 ATAD2BQ9ULI0 1458 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 SCN7AQ01118 1682 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 ADGBQ8N7X0 1667 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 NUP188Q5SRE5 1749 aa-1.46□□□□□ -2.64
CALD1-218ENST00000478075 MKI67P46013 3256 aaKnown RBP-1.46□□□□□ -2.64
CALD1-218ENST00000478075 TMEM131LA2VDJ0 1609 aa-1.47□□□□□ -2.64
CALD1-218ENST00000478075 PLCH1Q4KWH8 1693 aa-1.47□□□□□ -2.64
CALD1-218ENST00000478075 TRDV1A0A1B0GX56 115 aa-1.47□□□□□ -2.64
CALD1-218ENST00000478075 A0A1W2PPV4 95 aa-1.47□□□□□ -2.64
CALD1-218ENST00000478075 F8WEM9 126 aa-1.47□□□□□ -2.64
CALD1-218ENST00000478075 J3QLW9 94 aa-1.47□□□□□ -2.64
CALD1-218ENST00000478075 CHP2O43745 196 aa-1.47□□□□□ -2.64
CALD1-218ENST00000478075 SSNA1O43805 119 aa-1.47□□□□□ -2.64
CALD1-218ENST00000478075 NIPSNAP2O75323 286 aa-1.47□□□□□ -2.64
CALD1-218ENST00000478075 IAPPP10997 89 aa-1.47□□□□□ -2.64
CALD1-218ENST00000478075 CRYGSP22914 178 aa-1.47□□□□□ -2.64
CALD1-218ENST00000478075 RPS12P25398 132 aaKnown RBP-1.47□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms