RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 PRR34Q9NV39 138 aa9.22□□□□□ -0.93
HDAC6-214ENST00000465269 RBX1P62877 108 aa9.21□□□□□ -0.94
HDAC6-214ENST00000465269 GAGE6Q13070 117 aa9.21□□□□□ -0.94
HDAC6-214ENST00000465269 RHEBQ15382 184 aa9.21□□□□□ -0.94
HDAC6-214ENST00000465269 MRPL54Q6P161 138 aaKnown RBP9.21□□□□□ -0.94
HDAC6-214ENST00000465269 SMIM15Q7Z3B0 74 aa9.21□□□□□ -0.94
HDAC6-214ENST00000465269 AP5S1Q9NUS5 200 aa9.21□□□□□ -0.94
HDAC6-214ENST00000465269 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-214ENST00000465269 CAMPP49913 170 aa9.2□□□□□ -0.94
HDAC6-214ENST00000465269 RAB4BP61018 213 aa9.2□□□□□ -0.94
HDAC6-214ENST00000465269 RPL36AP83881 106 aaKnown RBP9.2□□□□□ -0.94
HDAC6-214ENST00000465269 PRR4Q16378 134 aa9.2□□□□□ -0.94
HDAC6-214ENST00000465269 RPL36ALQ969Q0 106 aaKnown RBP9.2□□□□□ -0.94
HDAC6-214ENST00000465269 TRBV7-3A0A075B6L6 115 aa9.19□□□□□ -0.94
HDAC6-214ENST00000465269 IMMP2LQ96T52 175 aa9.19□□□□□ -0.94
HDAC6-214ENST00000465269 NTM-AS1Q6ZSK4 140 aa9.18□□□□□ -0.94
HDAC6-214ENST00000465269 PRR26Q8N8Z3 221 aa9.18□□□□□ -0.94
HDAC6-214ENST00000465269 TMEM242Q9NWH2 141 aa9.18□□□□□ -0.94
HDAC6-214ENST00000465269 A0A096LNI7 61 aa9.17□□□□□ -0.94
HDAC6-214ENST00000465269 S100PP25815 95 aa9.17□□□□□ -0.94
HDAC6-214ENST00000465269 SUMO4Q6EEV6 95 aa9.17□□□□□ -0.94
HDAC6-214ENST00000465269 BTF3L4Q96K17 158 aa9.17□□□□□ -0.94
HDAC6-214ENST00000465269 TMEM191AQ9H0A3 160 aa9.17□□□□□ -0.94
HDAC6-214ENST00000465269 CRCT1Q9UGL9 99 aa9.17□□□□□ -0.94
HDAC6-214ENST00000465269 TRAV26-2A0A0B4J265 109 aa9.16□□□□□ -0.94
HDAC6-214ENST00000465269 A0A1B0GXF2 115 aa9.16□□□□□ -0.94
HDAC6-214ENST00000465269 RAB4AP20338 218 aa9.16□□□□□ -0.94
HDAC6-214ENST00000465269 HBBP68871 147 aa9.16□□□□□ -0.94
HDAC6-214ENST00000465269 HIGD2BQ4VC39 106 aa9.16□□□□□ -0.94
HDAC6-214ENST00000465269 AMN1Q8IY45 258 aa9.16□□□□□ -0.94
HDAC6-214ENST00000465269 TRBV10-1A0A0K0K1A3 114 aa9.15□□□□□ -0.94
HDAC6-214ENST00000465269 A0A1B0GW15 77 aa9.15□□□□□ -0.94
HDAC6-214ENST00000465269 M0QY20 66 aa9.15□□□□□ -0.94
HDAC6-214ENST00000465269 REG3AQ06141 175 aa9.15□□□□□ -0.94
HDAC6-214ENST00000465269 C15orf56Q8N910 161 aa9.15□□□□□ -0.94
HDAC6-214ENST00000465269 GATD1Q8NB37 220 aa9.15□□□□□ -0.94
HDAC6-214ENST00000465269 NEXN-AS1Q8NBZ9 246 aa9.15□□□□□ -0.94
HDAC6-214ENST00000465269 S100A8P05109 93 aa9.14□□□□□ -0.95
HDAC6-214ENST00000465269 Q6ZRP5 223 aa9.14□□□□□ -0.95
HDAC6-214ENST00000465269 ATP5L2Q7Z4Y8 100 aa9.14□□□□□ -0.95
HDAC6-214ENST00000465269 SMKR1H3BMG3 65 aa9.13□□□□□ -0.95
HDAC6-214ENST00000465269 FAM104BQ5XKR9 115 aa9.13□□□□□ -0.95
HDAC6-214ENST00000465269 RASL11AQ6T310 242 aa9.13□□□□□ -0.95
HDAC6-214ENST00000465269 RPL39LQ96EH5 51 aaKnown RBP9.13□□□□□ -0.95
HDAC6-214ENST00000465269 TRAV9-1A0A075B6T8 112 aa9.12□□□□□ -0.95
HDAC6-214ENST00000465269 TGIF2-C20orf24A0A0A6YYL0 155 aa9.12□□□□□ -0.95
HDAC6-214ENST00000465269 RPS10P46783 165 aaKnown RBP9.12□□□□□ -0.95
HDAC6-214ENST00000465269 MRPL51Q4U2R6 128 aaKnown RBP9.12□□□□□ -0.95
HDAC6-214ENST00000465269 C20orf203Q8NBC4 194 aa9.12□□□□□ -0.95
HDAC6-214ENST00000465269 NIT2Q9NQR4 276 aa9.12□□□□□ -0.95
HDAC6-214ENST00000465269 NCR2O95944 276 aa9.11□□□□□ -0.95
HDAC6-214ENST00000465269 IGLV4-60A0A075B6I1 120 aa9.1□□□□□ -0.95
HDAC6-214ENST00000465269 TMEM136Q6ZRR5 245 aa9.1□□□□□ -0.95
HDAC6-214ENST00000465269 CBLN2Q8IUK8 224 aa9.1□□□□□ -0.95
HDAC6-214ENST00000465269 MRAP2Q96G30 205 aa9.1□□□□□ -0.95
HDAC6-214ENST00000465269 PSORS1C2Q9UIG4 136 aa9.1□□□□□ -0.95
HDAC6-214ENST00000465269 CKS2P33552 79 aa9.09□□□□□ -0.95
HDAC6-214ENST00000465269 ZNF664Q8N3J9 261 aa9.09□□□□□ -0.95
HDAC6-214ENST00000465269 SMCO4Q9NRQ5 59 aa9.09□□□□□ -0.95
HDAC6-214ENST00000465269 MUC17Q685J3 4493 aa9.08□□□□□ -0.96
HDAC6-214ENST00000465269 D6R8Y8 96 aa9.08□□□□□ -0.96
HDAC6-214ENST00000465269 SCO1O75880 301 aa9.08□□□□□ -0.96
HDAC6-214ENST00000465269 PKIAP61925 76 aa9.08□□□□□ -0.96
HDAC6-214ENST00000465269 GAGE12HA6NDE8 117 aa9.07□□□□□ -0.96
HDAC6-214ENST00000465269 ATP6V1G1O75348 118 aa9.07□□□□□ -0.96
HDAC6-214ENST00000465269 KIAA1644Q3SXP7 199 aa9.07□□□□□ -0.96
HDAC6-214ENST00000465269 LINC00526Q96FQ7 95 aa9.07□□□□□ -0.96
HDAC6-214ENST00000465269 YPEL4Q96NS1 127 aa9.07□□□□□ -0.96
HDAC6-214ENST00000465269 GNB1LQ9BYB4 327 aa9.07□□□□□ -0.96
HDAC6-214ENST00000465269 TRBV24-1A0A075B6N3 115 aa9.06□□□□□ -0.96
HDAC6-214ENST00000465269 TRBV25-1A0A075B6N4 114 aa9.06□□□□□ -0.96
HDAC6-214ENST00000465269 TRAV8-4A0A0B4J246 113 aa9.06□□□□□ -0.96
HDAC6-214ENST00000465269 APCSP02743 223 aa9.06□□□□□ -0.96
HDAC6-214ENST00000465269 NRACQ8N912 160 aa9.06□□□□□ -0.96
HDAC6-214ENST00000465269 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-214ENST00000465269 ST20Q9HBF5 79 aa9.06□□□□□ -0.96
HDAC6-214ENST00000465269 IGKV3OR2-268A0A0C4DH90 116 aa9.05□□□□□ -0.96
HDAC6-214ENST00000465269 TRBV6-5A0A0K0K1A5 114 aa9.05□□□□□ -0.96
HDAC6-214ENST00000465269 SDHAF1A6NFY7 115 aa9.05□□□□□ -0.96
HDAC6-214ENST00000465269 TNFRSF6BO95407 300 aa9.05□□□□□ -0.96
HDAC6-214ENST00000465269 S100A1P23297 94 aa9.05□□□□□ -0.96
HDAC6-214ENST00000465269 COX19Q49B96 90 aa9.05□□□□□ -0.96
HDAC6-214ENST00000465269 ORMDL3Q8N138 153 aa9.05□□□□□ -0.96
HDAC6-214ENST00000465269 PPP1R17O96001 155 aa9.04□□□□□ -0.96
HDAC6-214ENST00000465269 NPYP01303 97 aa9.04□□□□□ -0.96
HDAC6-214ENST00000465269 PPBPP02775 128 aa9.04□□□□□ -0.96
HDAC6-214ENST00000465269 PMCHP20382 165 aa9.04□□□□□ -0.96
HDAC6-214ENST00000465269 FABP9Q0Z7S8 132 aa9.04□□□□□ -0.96
HDAC6-214ENST00000465269 LCE2DQ5TA82 110 aaPredicted RBP9.04□□□□□ -0.96
HDAC6-214ENST00000465269 PRELID3AQ96N28 172 aa9.04□□□□□ -0.96
HDAC6-214ENST00000465269 MRPL18Q9H0U6 180 aaKnown RBP9.04□□□□□ -0.96
HDAC6-214ENST00000465269 TRAPPC1Q9Y5R8 145 aa9.04□□□□□ -0.96
HDAC6-214ENST00000465269 POLR2KP53803 58 aaKnown RBP9.03□□□□□ -0.96
HDAC6-214ENST00000465269 SUMO2P61956 95 aaKnown RBP9.03□□□□□ -0.96
HDAC6-214ENST00000465269 IQCJQ1A5X6 159 aa9.03□□□□□ -0.96
HDAC6-214ENST00000465269 IGHV1-24A0A0C4DH33 117 aa9.02□□□□□ -0.97
HDAC6-214ENST00000465269 LOC389332A0A1B0GUA5 103 aa9.02□□□□□ -0.97
HDAC6-214ENST00000465269 I3L3M4 83 aa9.02□□□□□ -0.97
HDAC6-214ENST00000465269 MT-ND6P03923 174 aa9.02□□□□□ -0.97
HDAC6-214ENST00000465269 A0A1W2PNN7 141 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms