RNA–Protein interactions for RNA: ENST00000463875.6

GTDC1-212, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTDC1, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-212ENST00000463875 CCL25O15444 150 aa3.9□□□□□ -1.78
GTDC1-212ENST00000463875 NUPR1O60356 82 aa3.9□□□□□ -1.78
GTDC1-212ENST00000463875 CDC34P49427 236 aaPredicted RBP3.9□□□□□ -1.78
GTDC1-212ENST00000463875 CD164L2Q6UWJ8 174 aa3.9□□□□□ -1.78
GTDC1-212ENST00000463875 IMMP2LQ96T52 175 aa3.9□□□□□ -1.78
GTDC1-212ENST00000463875 PRYO14603 147 aa3.89□□□□□ -1.79
GTDC1-212ENST00000463875 SH2D1AO60880 128 aa3.89□□□□□ -1.79
GTDC1-212ENST00000463875 ZNF25P17030 456 aaPredicted RBP3.89□□□□□ -1.79
GTDC1-212ENST00000463875 CRIP1P50238 77 aa3.89□□□□□ -1.79
GTDC1-212ENST00000463875 NHLH2Q02577 135 aa3.89□□□□□ -1.79
GTDC1-212ENST00000463875 FAM229BQ4G0N7 80 aa3.89□□□□□ -1.79
GTDC1-212ENST00000463875 ZFP30Q9Y2G7 519 aa3.89□□□□□ -1.79
GTDC1-212ENST00000463875 LINC00959A0A1B0GUT2 108 aa3.89□□□□□ -1.79
GTDC1-212ENST00000463875 M0QXV9 152 aa3.89□□□□□ -1.79
GTDC1-212ENST00000463875 CXCL1P09341 107 aa3.89□□□□□ -1.79
GTDC1-212ENST00000463875 RPL28P46779 137 aaKnown RBP3.89□□□□□ -1.79
GTDC1-212ENST00000463875 SEC61GP60059 68 aa3.89□□□□□ -1.79
GTDC1-212ENST00000463875 SS18Q15532 418 aa3.89□□□□□ -1.79
GTDC1-212ENST00000463875 KRTAP13-2Q52LG2 175 aa3.89□□□□□ -1.79
GTDC1-212ENST00000463875 SPANXN1Q5VSR9 72 aa3.89□□□□□ -1.79
GTDC1-212ENST00000463875 FAM19A5Q7Z5A7 132 aaPredicted RBP3.89□□□□□ -1.79
GTDC1-212ENST00000463875 OR10AG1Q8NH19 301 aa3.89□□□□□ -1.79
GTDC1-212ENST00000463875 AP1S3Q96PC3 154 aa3.89□□□□□ -1.79
GTDC1-212ENST00000463875 TMSB15BA0A087X1C1 80 aa3.88□□□□□ -1.79
GTDC1-212ENST00000463875 A0A0A0MQY5 61 aa3.88□□□□□ -1.79
GTDC1-212ENST00000463875 FAM168BA1KXE4 195 aa3.88□□□□□ -1.79
GTDC1-212ENST00000463875 NAP1L6A6NFF2 107 aa3.88□□□□□ -1.79
GTDC1-212ENST00000463875 BCL2L11O43521 198 aa3.88□□□□□ -1.79
GTDC1-212ENST00000463875 SNAI2O43623 268 aa3.88□□□□□ -1.79
GTDC1-212ENST00000463875 GATCO43716 136 aaKnown RBP3.88□□□□□ -1.79
GTDC1-212ENST00000463875 OR5AL1P0C617 328 aa3.88□□□□□ -1.79
GTDC1-212ENST00000463875 TLX1NBP0CAT3 122 aa3.88□□□□□ -1.79
GTDC1-212ENST00000463875 NKX2-5P52952 324 aaPredicted RBP3.88□□□□□ -1.79
GTDC1-212ENST00000463875 UBE2G2P60604 165 aa3.88□□□□□ -1.79
GTDC1-212ENST00000463875 SUMO2P61956 95 aaKnown RBP3.88□□□□□ -1.79
GTDC1-212ENST00000463875 CNPY1Q3B7I2 92 aa3.88□□□□□ -1.79
GTDC1-212ENST00000463875 LINC00242Q5T6M2 205 aa3.88□□□□□ -1.79
GTDC1-212ENST00000463875 RNASEKQ6P5S7 137 aaKnown RBP3.88□□□□□ -1.79
GTDC1-212ENST00000463875 SPAG11AQ6PDA7 123 aa3.88□□□□□ -1.79
GTDC1-212ENST00000463875 Q86TA4 180 aa3.88□□□□□ -1.79
GTDC1-212ENST00000463875 NIT2Q9NQR4 276 aa3.88□□□□□ -1.79
GTDC1-212ENST00000463875 USH2AO75445 5202 aa3.87□□□□□ -1.79
GTDC1-212ENST00000463875 RAB19A4D1S5 217 aa3.87□□□□□ -1.79
GTDC1-212ENST00000463875 ARL14EPLP0DKL9 152 aa3.87□□□□□ -1.79
GTDC1-212ENST00000463875 IL15RAQ13261 267 aa3.87□□□□□ -1.79
GTDC1-212ENST00000463875 RASL11AQ6T310 242 aa3.87□□□□□ -1.79
GTDC1-212ENST00000463875 OR2D3Q8NGH3 330 aa3.87□□□□□ -1.79
GTDC1-212ENST00000463875 BTF3L4Q96K17 158 aa3.87□□□□□ -1.79
GTDC1-212ENST00000463875 MRPL35Q9NZE8 188 aaKnown RBP3.87□□□□□ -1.79
GTDC1-212ENST00000463875 SYNE2Q8WXH0 6885 aaKnown RBP3.86□□□□□ -1.79
GTDC1-212ENST00000463875 IGKV2D-26A0A0A0MRZ7 120 aa3.86□□□□□ -1.79
GTDC1-212ENST00000463875 NCR2O95944 276 aa3.86□□□□□ -1.79
GTDC1-212ENST00000463875 CFC1P0CG37 223 aa3.86□□□□□ -1.79
GTDC1-212ENST00000463875 CEBPGP53567 150 aa3.86□□□□□ -1.79
GTDC1-212ENST00000463875 TMEM241Q24JQ0 296 aa3.86□□□□□ -1.79
GTDC1-212ENST00000463875 SLC51BQ86UW2 128 aa3.86□□□□□ -1.79
GTDC1-212ENST00000463875 SCGB1C1Q8TD33 95 aa3.86□□□□□ -1.79
GTDC1-212ENST00000463875 TMEM101Q96IK0 257 aa3.86□□□□□ -1.79
GTDC1-212ENST00000463875 KIR2DL4Q99706 377 aa3.86□□□□□ -1.79
GTDC1-212ENST00000463875 OPRPNQ99935 248 aaPredicted RBP3.86□□□□□ -1.79
GTDC1-212ENST00000463875 TMEM167BQ9NRX6 74 aa3.86□□□□□ -1.79
GTDC1-212ENST00000463875 A0A1W2PRE2 83 aa3.85□□□□□ -1.79
GTDC1-212ENST00000463875 G3V3Q6 166 aa3.85□□□□□ -1.79
GTDC1-212ENST00000463875 COX7A2LO14548 114 aa3.85□□□□□ -1.79
GTDC1-212ENST00000463875 VAMP3Q15836 100 aa3.85□□□□□ -1.79
GTDC1-212ENST00000463875 PYDC2Q56P42 97 aa3.85□□□□□ -1.79
GTDC1-212ENST00000463875 SUMO4Q6EEV6 95 aa3.85□□□□□ -1.79
GTDC1-212ENST00000463875 HIST1H2BAQ96A08 127 aa3.85□□□□□ -1.79
GTDC1-212ENST00000463875 C1orf196B1AJZ1 125 aa3.85□□□□□ -1.79
GTDC1-212ENST00000463875 MGPP08493 103 aa3.85□□□□□ -1.79
GTDC1-212ENST00000463875 RAB4AP20338 218 aa3.85□□□□□ -1.79
GTDC1-212ENST00000463875 GCHFRP30047 84 aa3.85□□□□□ -1.79
GTDC1-212ENST00000463875 KRTAP7-1Q8IUC3 87 aa3.85□□□□□ -1.79
GTDC1-212ENST00000463875 FMC1Q96HJ9 113 aa3.85□□□□□ -1.79
GTDC1-212ENST00000463875 KRTAP9-3Q9BYQ3 159 aa3.85□□□□□ -1.79
GTDC1-212ENST00000463875 NKX6-2Q9C056 277 aaPredicted RBP3.85□□□□□ -1.79
GTDC1-212ENST00000463875 TEX46H3BTG2 121 aa3.84□□□□□ -1.8
GTDC1-212ENST00000463875 PEX7O00628 323 aa3.84□□□□□ -1.8
GTDC1-212ENST00000463875 HMGB3O15347 200 aaKnown RBP3.84□□□□□ -1.8
GTDC1-212ENST00000463875 NTF3P20783 257 aa3.84□□□□□ -1.8
GTDC1-212ENST00000463875 S100A1P23297 94 aa3.84□□□□□ -1.8
GTDC1-212ENST00000463875 DAND5Q8N907 189 aa3.84□□□□□ -1.8
GTDC1-212ENST00000463875 OR10D4PQ8NGN7 298 aa3.84□□□□□ -1.8
GTDC1-212ENST00000463875 SMDT1Q9H4I9 107 aa3.84□□□□□ -1.8
GTDC1-212ENST00000463875 ANAPC11Q9NYG5 84 aa3.84□□□□□ -1.8
GTDC1-212ENST00000463875 NDUFA1O15239 70 aa3.83□□□□□ -1.8
GTDC1-212ENST00000463875 BCE1O60756 84 aa3.83□□□□□ -1.8
GTDC1-212ENST00000463875 CXorf1O96002 111 aa3.83□□□□□ -1.8
GTDC1-212ENST00000463875 UBE2G1P62253 170 aa3.83□□□□□ -1.8
GTDC1-212ENST00000463875 SPAG11BQ08648 103 aa3.83□□□□□ -1.8
GTDC1-212ENST00000463875 C6orf226Q5I0X4 101 aa3.83□□□□□ -1.8
GTDC1-212ENST00000463875 Q6ZNX1 250 aa3.83□□□□□ -1.8
GTDC1-212ENST00000463875 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.82□□□□□ -1.8
GTDC1-212ENST00000463875 IGKV2-29A2NJV5 120 aaPredicted RBP3.82□□□□□ -1.8
GTDC1-212ENST00000463875 C9orf118A6NHY6 69 aa3.82□□□□□ -1.8
GTDC1-212ENST00000463875 VCYO14598 125 aa3.82□□□□□ -1.8
GTDC1-212ENST00000463875 LTAP01374 205 aa3.82□□□□□ -1.8
GTDC1-212ENST00000463875 APCSP02743 223 aa3.82□□□□□ -1.8
GTDC1-212ENST00000463875 KRTAP6-3Q3LI67 103 aa3.82□□□□□ -1.8
GTDC1-212ENST00000463875 GAGE2EQ4V326 116 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms