RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 ZNF479Q96JC4 524 aa7.09□□□□□ -1.27
PTPRD-207ENST00000463477 VCX2Q9H322 139 aa7.09□□□□□ -1.27
PTPRD-207ENST00000463477 STAB2Q8WWQ8 2551 aa7.09□□□□□ -1.27
PTPRD-207ENST00000463477 K7ERJ3 54 aa7.09□□□□□ -1.27
PTPRD-207ENST00000463477 K7ERU9 68 aa7.09□□□□□ -1.27
PTPRD-207ENST00000463477 HTN1P15515 57 aa7.09□□□□□ -1.27
PTPRD-207ENST00000463477 ZNF22P17026 224 aaPredicted RBP7.09□□□□□ -1.27
PTPRD-207ENST00000463477 FAM104AQ969W3 186 aa7.09□□□□□ -1.27
PTPRD-207ENST00000463477 NAA38Q9BRA0 125 aaKnown RBP7.09□□□□□ -1.27
PTPRD-207ENST00000463477 TM2D3Q9BRN9 247 aa7.09□□□□□ -1.27
PTPRD-207ENST00000463477 TIMM21Q9BVV7 248 aa7.09□□□□□ -1.27
PTPRD-207ENST00000463477 NBEAL2Q6ZNJ1 2754 aa7.08□□□□□ -1.28
PTPRD-207ENST00000463477 EMP1P54849 157 aa7.08□□□□□ -1.28
PTPRD-207ENST00000463477 TSPEAR-AS2P59090 65 aa7.08□□□□□ -1.28
PTPRD-207ENST00000463477 C1orf158Q8N1D5 194 aa7.08□□□□□ -1.28
PTPRD-207ENST00000463477 CHCHD7Q9BUK0 85 aa7.08□□□□□ -1.28
PTPRD-207ENST00000463477 WFDC10AQ9H1F0 79 aa7.08□□□□□ -1.28
PTPRD-207ENST00000463477 LGALS3P17931 250 aaKnown RBP7.07□□□□□ -1.28
PTPRD-207ENST00000463477 SRSF9Q13242 221 aaKnown RBP eCLIP7.07□□□□□ -1.28
PTPRD-207ENST00000463477 Q6ZSN1 163 aa7.07□□□□□ -1.28
PTPRD-207ENST00000463477 TMEM263Q8WUH6 116 aaKnown RBP7.07□□□□□ -1.28
PTPRD-207ENST00000463477 OPRPNQ99935 248 aaPredicted RBP7.07□□□□□ -1.28
PTPRD-207ENST00000463477 TENM3Q9P273 2699 aa7.06□□□□□ -1.28
PTPRD-207ENST00000463477 IGHV3-73A0A0B4J1V6 119 aa7.06□□□□□ -1.28
PTPRD-207ENST00000463477 TRBV10-1A0A0K0K1A3 114 aa7.06□□□□□ -1.28
PTPRD-207ENST00000463477 CIDEAO60543 219 aa7.06□□□□□ -1.28
PTPRD-207ENST00000463477 IGHV3-30P01768 117 aa7.06□□□□□ -1.28
PTPRD-207ENST00000463477 IGHV3-30-5P0DP03 117 aa7.06□□□□□ -1.28
PTPRD-207ENST00000463477 DEFB104AQ8WTQ1 72 aa7.06□□□□□ -1.28
PTPRD-207ENST00000463477 MRPL16Q9NX20 251 aaKnown RBP7.06□□□□□ -1.28
PTPRD-207ENST00000463477 XCL2Q9UBD3 114 aa7.06□□□□□ -1.28
PTPRD-207ENST00000463477 UBE2D4Q9Y2X8 147 aa7.06□□□□□ -1.28
PTPRD-207ENST00000463477 A0A0J9YXV3 536 aa7.06□□□□□ -1.28
PTPRD-207ENST00000463477 TINCRA0A1B0GVN0 87 aa7.06□□□□□ -1.28
PTPRD-207ENST00000463477 F8W1H4 67 aa7.06□□□□□ -1.28
PTPRD-207ENST00000463477 PRM2P04554 102 aa7.06□□□□□ -1.28
PTPRD-207ENST00000463477 COTL1Q14019 142 aa7.06□□□□□ -1.28
PTPRD-207ENST00000463477 WWC2-AS2Q96NR7 200 aa7.06□□□□□ -1.28
PTPRD-207ENST00000463477 SPATA25Q9BR10 227 aa7.06□□□□□ -1.28
PTPRD-207ENST00000463477 TRAV4A0A0B4J268 109 aa7.05□□□□□ -1.28
PTPRD-207ENST00000463477 AZU1P20160 251 aa7.05□□□□□ -1.28
PTPRD-207ENST00000463477 DAZ2Q13117 558 aaKnown RBP7.05□□□□□ -1.28
PTPRD-207ENST00000463477 LYRM7Q5U5X0 104 aa7.04□□□□□ -1.28
PTPRD-207ENST00000463477 FAM19A3Q7Z5A8 133 aa7.04□□□□□ -1.28
PTPRD-207ENST00000463477 C1QTNF4Q9BXJ3 329 aa7.04□□□□□ -1.28
PTPRD-207ENST00000463477 CSDC2Q9Y534 153 aaKnown RBP7.04□□□□□ -1.28
PTPRD-207ENST00000463477 IGLV5-45A0A087WSX0 123 aa7.03□□□□□ -1.28
PTPRD-207ENST00000463477 IGHV1-58A0A0C4DH39 117 aa7.03□□□□□ -1.28
PTPRD-207ENST00000463477 TMEM238C9JI98 176 aa7.03□□□□□ -1.28
PTPRD-207ENST00000463477 TIRAPP58753 221 aa7.03□□□□□ -1.28
PTPRD-207ENST00000463477 SMAGPQ0VAQ4 97 aa7.03□□□□□ -1.28
PTPRD-207ENST00000463477 KIR2DL5BQ8NHK3 375 aa7.03□□□□□ -1.28
PTPRD-207ENST00000463477 C16orf74Q96GX8 76 aa7.03□□□□□ -1.28
PTPRD-207ENST00000463477 K7EQD1 137 aa7.03□□□□□ -1.28
PTPRD-207ENST00000463477 GIG44P09565 113 aaPredicted RBP7.03□□□□□ -1.28
PTPRD-207ENST00000463477 IGHV3-30-3P0DP02 117 aa7.03□□□□□ -1.28
PTPRD-207ENST00000463477 UBE2D3P61077 147 aa7.03□□□□□ -1.28
PTPRD-207ENST00000463477 UBE2D2P62837 147 aa7.03□□□□□ -1.28
PTPRD-207ENST00000463477 DAZ4Q86SG3 579 aaKnown RBP7.03□□□□□ -1.28
PTPRD-207ENST00000463477 DAZ3Q9NR90 486 aaKnown RBP7.03□□□□□ -1.28
PTPRD-207ENST00000463477 PGPEP1Q9NXJ5 209 aa7.03□□□□□ -1.28
PTPRD-207ENST00000463477 Q9UF83 564 aa7.03□□□□□ -1.28
PTPRD-207ENST00000463477 TRGV1A0A0A0MS02 117 aa7.02□□□□□ -1.29
PTPRD-207ENST00000463477 APOC4P55056 127 aa7.02□□□□□ -1.29
PTPRD-207ENST00000463477 RPL36AP83881 106 aaKnown RBP7.02□□□□□ -1.29
PTPRD-207ENST00000463477 RPL36ALQ969Q0 106 aaKnown RBP7.02□□□□□ -1.29
PTPRD-207ENST00000463477 OVOL2Q9BRP0 275 aa7.02□□□□□ -1.29
PTPRD-207ENST00000463477 A0A0B4J2C4 111 aa7.01□□□□□ -1.29
PTPRD-207ENST00000463477 TSPAN13O95857 204 aa7.01□□□□□ -1.29
PTPRD-207ENST00000463477 CFC1BP0CG36 223 aa7.01□□□□□ -1.29
PTPRD-207ENST00000463477 CFC1P0CG37 223 aa7.01□□□□□ -1.29
PTPRD-207ENST00000463477 RPL24P83731 157 aaKnown RBP7.01□□□□□ -1.29
PTPRD-207ENST00000463477 Q6ZUT4 128 aa7.01□□□□□ -1.29
PTPRD-207ENST00000463477 C10orf126Q8N4M7 172 aa7.01□□□□□ -1.29
PTPRD-207ENST00000463477 CSNK1G2-AS1Q8NCQ2 148 aa7.01□□□□□ -1.29
PTPRD-207ENST00000463477 VSIG2Q96IQ7 327 aa7.01□□□□□ -1.29
PTPRD-207ENST00000463477 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7□□□□□ -1.29
PTPRD-207ENST00000463477 TRAV16A0A0A6YYK6 109 aaPredicted RBP7□□□□□ -1.29
PTPRD-207ENST00000463477 A0A0J9YXY3 114 aa7□□□□□ -1.29
PTPRD-207ENST00000463477 PLAC8L1A1L4L8 177 aa7□□□□□ -1.29
PTPRD-207ENST00000463477 IGKV2-29A2NJV5 120 aaPredicted RBP7□□□□□ -1.29
PTPRD-207ENST00000463477 TIMM17BO60830 172 aa7□□□□□ -1.29
PTPRD-207ENST00000463477 CEMP1Q6PRD7 247 aaPredicted RBP7□□□□□ -1.29
PTPRD-207ENST00000463477 Q6ZTI0 123 aa7□□□□□ -1.29
PTPRD-207ENST00000463477 RNF183Q96D59 192 aa7□□□□□ -1.29
PTPRD-207ENST00000463477 SPANXDQ9BXN6 97 aa7□□□□□ -1.29
PTPRD-207ENST00000463477 GTSF1LQ9H1H1 148 aa7□□□□□ -1.29
PTPRD-207ENST00000463477 SPANXCQ9NY87 97 aa7□□□□□ -1.29
PTPRD-207ENST00000463477 PRO1854Q9UHT4 67 aa7□□□□□ -1.29
PTPRD-207ENST00000463477 PRO0461Q9UI25 63 aa7□□□□□ -1.29
PTPRD-207ENST00000463477 IGHV3OR16-12A0A075B7B8 117 aa7□□□□□ -1.29
PTPRD-207ENST00000463477 RPL35AP18077 110 aaKnown RBP7□□□□□ -1.29
PTPRD-207ENST00000463477 GAGE13Q4V321 117 aa7□□□□□ -1.29
PTPRD-207ENST00000463477 ZFAND6Q6FIF0 208 aa7□□□□□ -1.29
PTPRD-207ENST00000463477 DNAH7Q8WXX0 4024 aa6.99□□□□□ -1.29
PTPRD-207ENST00000463477 TRBV20-1A0A075B6N2 111 aa6.99□□□□□ -1.29
PTPRD-207ENST00000463477 TRBV6-4A0A1B0GX49 114 aa6.99□□□□□ -1.29
PTPRD-207ENST00000463477 H3BMG7 143 aa6.99□□□□□ -1.29
PTPRD-207ENST00000463477 H7C423 109 aa6.99□□□□□ -1.29
PTPRD-207ENST00000463477 APOMO95445 188 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms