RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 IGLV1-40P01703 118 aa2.91□□□□□ -1.94
RGPD1-202ENST00000409776 FAM215AQ9Y5M1 114 aa2.91□□□□□ -1.94
RGPD1-202ENST00000409776 FAM229BQ4G0N7 80 aa2.9□□□□□ -1.94
RGPD1-202ENST00000409776 Q6ZS46 218 aa2.9□□□□□ -1.94
RGPD1-202ENST00000409776 MRPL34Q9BQ48 92 aaKnown RBP2.9□□□□□ -1.94
RGPD1-202ENST00000409776 PDE4DIPQ5VU43 2346 aa2.9□□□□□ -1.95
RGPD1-202ENST00000409776 SPEGQ15772 3267 aa2.9□□□□□ -1.95
RGPD1-202ENST00000409776 FANCMQ8IYD8 2048 aa2.9□□□□□ -1.95
RGPD1-202ENST00000409776 CEP350Q5VT06 3117 aa2.9□□□□□ -1.95
RGPD1-202ENST00000409776 KRTAP27-1Q3LI81 207 aa2.9□□□□□ -1.95
RGPD1-202ENST00000409776 LAMA5O15230 3695 aa2.9□□□□□ -1.95
RGPD1-202ENST00000409776 LAMA3Q16787 3333 aa2.89□□□□□ -1.95
RGPD1-202ENST00000409776 HEATR5AQ86XA9 2040 aa2.89□□□□□ -1.95
RGPD1-202ENST00000409776 IGLV1-50A0A075B6I6 118 aa2.89□□□□□ -1.95
RGPD1-202ENST00000409776 TRBV7-4A0A0J9YYF1 115 aa2.89□□□□□ -1.95
RGPD1-202ENST00000409776 DEFB4AO15263 64 aa2.89□□□□□ -1.95
RGPD1-202ENST00000409776 MON2Q7Z3U7 1717 aa2.89□□□□□ -1.95
RGPD1-202ENST00000409776 CCDC88AQ3V6T2 1871 aa2.89□□□□□ -1.95
RGPD1-202ENST00000409776 FBXL19-AS1Q494R0 122 aa2.89□□□□□ -1.95
RGPD1-202ENST00000409776 NUP205Q92621 2012 aa2.89□□□□□ -1.95
RGPD1-202ENST00000409776 ANKRD31Q8N7Z5 1873 aa2.89□□□□□ -1.95
RGPD1-202ENST00000409776 COL14A1Q05707 1796 aaKnown RBP2.89□□□□□ -1.95
RGPD1-202ENST00000409776 E7EUB6 86 aa2.89□□□□□ -1.95
RGPD1-202ENST00000409776 MUC3AQ02505 3323 aa2.89□□□□□ -1.95
RGPD1-202ENST00000409776 PARP4Q9UKK3 1724 aaKnown RBP2.89□□□□□ -1.95
RGPD1-202ENST00000409776 CUBNO60494 3623 aa2.88□□□□□ -1.95
RGPD1-202ENST00000409776 DOCK2Q92608 1830 aa2.88□□□□□ -1.95
RGPD1-202ENST00000409776 FSTL3O95633 263 aa2.88□□□□□ -1.95
RGPD1-202ENST00000409776 SPATA3Q8NHX4 192 aa2.88□□□□□ -1.95
RGPD1-202ENST00000409776 PCNX2A6NKB5 2137 aa2.88□□□□□ -1.95
RGPD1-202ENST00000409776 IGLV1-47P01700 117 aa2.88□□□□□ -1.95
RGPD1-202ENST00000409776 CSRP3P50461 194 aa2.87□□□□□ -1.95
RGPD1-202ENST00000409776 Q6YL49 198 aa2.87□□□□□ -1.95
RGPD1-202ENST00000409776 NUP214P35658 2090 aaPredicted RBP2.87□□□□□ -1.95
RGPD1-202ENST00000409776 RREB1Q92766 1687 aa2.87□□□□□ -1.95
RGPD1-202ENST00000409776 SPACA4Q8TDM5 124 aa2.87□□□□□ -1.95
RGPD1-202ENST00000409776 ZSWIM8A7E2V4 1837 aa2.87□□□□□ -1.95
RGPD1-202ENST00000409776 TOPAZ1Q8N9V7 1692 aa2.87□□□□□ -1.95
RGPD1-202ENST00000409776 CAMTA1Q9Y6Y1 1673 aa2.87□□□□□ -1.95
RGPD1-202ENST00000409776 C16orf90A8MZG2 172 aa2.87□□□□□ -1.95
RGPD1-202ENST00000409776 GTF3C1Q12789 2109 aa2.87□□□□□ -1.95
RGPD1-202ENST00000409776 Q8IZM0 81 aa2.87□□□□□ -1.95
RGPD1-202ENST00000409776 TDRD6O60522 2096 aaKnown RBP2.87□□□□□ -1.95
RGPD1-202ENST00000409776 TYMSOSQ8TAI1 123 aa2.87□□□□□ -1.95
RGPD1-202ENST00000409776 SMCHD1A6NHR9 2005 aa2.87□□□□□ -1.95
RGPD1-202ENST00000409776 RTL8CO15255 209 aa2.87□□□□□ -1.95
RGPD1-202ENST00000409776 POLR2KP53803 58 aaKnown RBP2.87□□□□□ -1.95
RGPD1-202ENST00000409776 C17orf58Q2M2W7 97 aa2.87□□□□□ -1.95
RGPD1-202ENST00000409776 TIAM2Q8IVF5 1701 aa2.87□□□□□ -1.95
RGPD1-202ENST00000409776 ZFC3H1O60293 1989 aaKnown RBP2.87□□□□□ -1.95
RGPD1-202ENST00000409776 WT1-ASQ06250 92 aa2.87□□□□□ -1.95
RGPD1-202ENST00000409776 MYOFQ9NZM1 2061 aa2.86□□□□□ -1.95
RGPD1-202ENST00000409776 LRP5O75197 1615 aa2.86□□□□□ -1.95
RGPD1-202ENST00000409776 NRXN3Q9Y4C0 1643 aa2.86□□□□□ -1.95
RGPD1-202ENST00000409776 LINC01556Q5JQF7 62 aa2.86□□□□□ -1.95
RGPD1-202ENST00000409776 COL2A1P02458 1487 aaPredicted RBP2.86□□□□□ -1.95
RGPD1-202ENST00000409776 SLURP2P0DP57 97 aa2.86□□□□□ -1.95
RGPD1-202ENST00000409776 ADAMTSL4-AS1Q5T5F5 129 aa2.86□□□□□ -1.95
RGPD1-202ENST00000409776 CDC42SE2Q9NRR3 84 aa2.86□□□□□ -1.95
RGPD1-202ENST00000409776 KMT2EQ8IZD2 1858 aa2.86□□□□□ -1.95
RGPD1-202ENST00000409776 SPRNQ5BIV9 151 aa2.86□□□□□ -1.95
RGPD1-202ENST00000409776 COX6B2Q6YFQ2 88 aa2.86□□□□□ -1.95
RGPD1-202ENST00000409776 C9orf106Q8NAJ2 232 aa2.86□□□□□ -1.95
RGPD1-202ENST00000409776 Q6ZR54 194 aa2.86□□□□□ -1.95
RGPD1-202ENST00000409776 SMCR5Q8TEV8 140 aa2.86□□□□□ -1.95
RGPD1-202ENST00000409776 Q96NJ1 140 aa2.86□□□□□ -1.95
RGPD1-202ENST00000409776 ADAMTS7Q9UKP4 1686 aa2.86□□□□□ -1.95
RGPD1-202ENST00000409776 RTTNQ86VV8 2226 aa2.86□□□□□ -1.95
RGPD1-202ENST00000409776 IGLV2-11P01706 119 aa2.86□□□□□ -1.95
RGPD1-202ENST00000409776 MCM3APO60318 1980 aa2.85□□□□□ -1.95
RGPD1-202ENST00000409776 MYO5BQ9ULV0 1848 aa2.85□□□□□ -1.95
RGPD1-202ENST00000409776 ASCC3Q8N3C0 2202 aaKnown RBP2.85□□□□□ -1.95
RGPD1-202ENST00000409776 Q75L30 129 aa2.85□□□□□ -1.95
RGPD1-202ENST00000409776 CADP27708 2225 aa2.85□□□□□ -1.95
RGPD1-202ENST00000409776 DDX60Q8IY21 1712 aaKnown RBP2.85□□□□□ -1.95
RGPD1-202ENST00000409776 LINC01006Q8NI28 216 aa2.85□□□□□ -1.95
RGPD1-202ENST00000409776 LCE2BO14633 110 aa2.85□□□□□ -1.95
RGPD1-202ENST00000409776 KLKP1Q107X0 134 aa2.85□□□□□ -1.95
RGPD1-202ENST00000409776 Q6ZTI0 123 aa2.85□□□□□ -1.95
RGPD1-202ENST00000409776 C22orf24Q9Y442 160 aa2.85□□□□□ -1.95
RGPD1-202ENST00000409776 LYPD2Q6UXB3 125 aa2.84□□□□□ -1.95
RGPD1-202ENST00000409776 EML6Q6ZMW3 1958 aa2.84□□□□□ -1.95
RGPD1-202ENST00000409776 IGFL2Q6UWQ7 119 aa2.84□□□□□ -1.95
RGPD1-202ENST00000409776 DEFB103AP81534 67 aa2.84□□□□□ -1.95
RGPD1-202ENST00000409776 EGFEM1PQ0D2K5 195 aa2.84□□□□□ -1.95
RGPD1-202ENST00000409776 PSMG3-AS1Q96PY0 264 aa2.84□□□□□ -1.95
RGPD1-202ENST00000409776 DEFB131BA0A096LNP1 70 aa2.84□□□□□ -1.96
RGPD1-202ENST00000409776 LINC01548A6NM66 108 aa2.84□□□□□ -1.96
RGPD1-202ENST00000409776 Q8N9P0 234 aaPredicted RBP2.84□□□□□ -1.96
RGPD1-202ENST00000409776 BBC3Q96PG8 261 aaPredicted RBP2.84□□□□□ -1.96
RGPD1-202ENST00000409776 CSMD1Q96PZ7 3565 aa2.84□□□□□ -1.96
RGPD1-202ENST00000409776 YLPM1P49750 1951 aaKnown RBP2.83□□□□□ -1.96
RGPD1-202ENST00000409776 C9orf163Q8N9P6 203 aa2.83□□□□□ -1.96
RGPD1-202ENST00000409776 NWD2Q9ULI1 1742 aa2.83□□□□□ -1.96
RGPD1-202ENST00000409776 LINC00574Q9H8X3 128 aa2.83□□□□□ -1.96
RGPD1-202ENST00000409776 BRWD1Q9NSI6 2320 aa2.83□□□□□ -1.96
RGPD1-202ENST00000409776 A0A1B0GU33 70 aa2.83□□□□□ -1.96
RGPD1-202ENST00000409776 H7BZZ5 65 aa2.83□□□□□ -1.96
RGPD1-202ENST00000409776 TP53TG3Q9ULZ0 132 aa2.83□□□□□ -1.96
RGPD1-202ENST00000409776 LINC01558Q9Y6Z2 57 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms