RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 RPL7L1Q6DKI1 246 aaKnown RBP0.4□□□□□ -2.35
CD47-203ENST00000398258 OR2T2Q6IF00 324 aa0.4□□□□□ -2.35
CD47-203ENST00000398258 SPATA8Q6RVD6 105 aa0.4□□□□□ -2.35
CD47-203ENST00000398258 TCEAL4Q96EI5 215 aa0.4□□□□□ -2.35
CD47-203ENST00000398258 COA4Q9NYJ1 87 aa0.4□□□□□ -2.35
CD47-203ENST00000398258 ERG28Q9UKR5 140 aa0.4□□□□□ -2.35
CD47-203ENST00000398258 KIAA1551Q9HCM1 1747 aa0.4□□□□□ -2.35
CD47-203ENST00000398258 AKAP11Q9UKA4 1901 aa0.4□□□□□ -2.35
CD47-203ENST00000398258 C2CD3Q4AC94 2353 aa0.4□□□□□ -2.35
CD47-203ENST00000398258 ACACBO00763 2458 aa0.4□□□□□ -2.35
CD47-203ENST00000398258 USP9XQ93008 2570 aaPredicted RBP0.4□□□□□ -2.35
CD47-203ENST00000398258 DLEC1Q9Y238 1755 aa0.4□□□□□ -2.35
CD47-203ENST00000398258 TRPM7Q96QT4 1865 aa0.39□□□□□ -2.35
CD47-203ENST00000398258 CNOT1A5YKK6 2376 aaKnown RBP0.39□□□□□ -2.35
CD47-203ENST00000398258 NRXN2Q9P2S2 1712 aa0.39□□□□□ -2.35
CD47-203ENST00000398258 PHIPQ8WWQ0 1821 aa0.39□□□□□ -2.35
CD47-203ENST00000398258 WNK3Q9BYP7 1800 aa0.39□□□□□ -2.35
CD47-203ENST00000398258 MUC5ACP98088 5654 aa0.39□□□□□ -2.35
CD47-203ENST00000398258 IL5P05113 134 aa0.39□□□□□ -2.35
CD47-203ENST00000398258 PYYP10082 97 aa0.39□□□□□ -2.35
CD47-203ENST00000398258 RPL37P61927 97 aaKnown RBP0.39□□□□□ -2.35
CD47-203ENST00000398258 UBE2G1P62253 170 aa0.39□□□□□ -2.35
CD47-203ENST00000398258 CYP2G1PQ6ZSU1 146 aa0.39□□□□□ -2.35
CD47-203ENST00000398258 Q6ZUT4 128 aa0.39□□□□□ -2.35
CD47-203ENST00000398258 VSTM2AQ8TAG5 236 aa0.39□□□□□ -2.35
CD47-203ENST00000398258 DEFB104AQ8WTQ1 72 aa0.39□□□□□ -2.35
CD47-203ENST00000398258 FAM103A1Q9BTL3 118 aaKnown RBP0.39□□□□□ -2.35
CD47-203ENST00000398258 BET1LQ9NYM9 111 aa0.39□□□□□ -2.35
CD47-203ENST00000398258 MTORP42345 2549 aa0.39□□□□□ -2.35
CD47-203ENST00000398258 NCOR2Q9Y618 2525 aa0.39□□□□□ -2.35
CD47-203ENST00000398258 ZFHX4Q86UP3 3567 aa0.39□□□□□ -2.35
CD47-203ENST00000398258 IGSF10Q6WRI0 2623 aa0.39□□□□□ -2.35
CD47-203ENST00000398258 ARFGEF2Q9Y6D5 1785 aa0.39□□□□□ -2.35
CD47-203ENST00000398258 ABCA1O95477 2261 aa0.39□□□□□ -2.35
CD47-203ENST00000398258 ABCA12Q86UK0 2595 aa0.39□□□□□ -2.35
CD47-203ENST00000398258 MYO18BQ8IUG5 2567 aa0.39□□□□□ -2.35
CD47-203ENST00000398258 COL6A3P12111 3177 aa0.39□□□□□ -2.35
CD47-203ENST00000398258 TEP1Q99973 2627 aaKnown RBP0.38□□□□□ -2.35
CD47-203ENST00000398258 SZT2Q5T011 3432 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 DOPEY1Q5JWR5 2465 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 NINQ8N4C6 2090 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 MACF1Q9UPN3 7388 aaKnown RBP0.38□□□□□ -2.35
CD47-203ENST00000398258 TRAV12-3A0A0B4J271 114 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 A6NIN4 97 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 CCDC179H3BU77 68 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 NDUFA2O43678 99 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 SNCGO76070 127 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 NCR2O95944 276 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 IFNA17P01571 189 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 STATHP02808 62 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 CD52P31358 61 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 S100A12P80511 92 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 S100A7L2Q5SY68 101 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 SPANXN1Q5VSR9 72 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 UBE2DNLQ8IWF7 75 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 C20orf197Q8N268 126 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 KCNRGQ8N5I3 272 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 PPP1R1CQ8WVI7 109 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 SDF2Q99470 211 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 TMEM242Q9NWH2 141 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 JMJD1CQ15652 2540 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 NCOR1O75376 2440 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 TSC2P49815 1807 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 AFDNP55196 1824 aaKnown RBP0.38□□□□□ -2.35
CD47-203ENST00000398258 ZNF236Q9UL36 1845 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 CCDC168Q8NDH2 2452 aa0.38□□□□□ -2.35
CD47-203ENST00000398258 UBR3Q6ZT12 1888 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 HECTD1Q9ULT8 2610 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 USP24Q9UPU5 2620 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 ZFYVE26Q68DK2 2539 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 A0A1B0GUL6 1792 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 POLQO75417 2590 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 SETD2Q9BYW2 2564 aaPredicted RBP0.37□□□□□ -2.35
CD47-203ENST00000398258 REV3LO60673 3130 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 SBF2Q86WG5 1849 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 CLPSL1A2RUU4 121 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 GNG7O60262 68 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 TNFP01375 233 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 HMGN1P05114 100 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 EMX2Q04743 252 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 C9orf116Q5BN46 136 aaPredicted RBP0.37□□□□□ -2.35
CD47-203ENST00000398258 NDUFA11Q86Y39 141 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 C4orf33Q8N1A6 199 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 SPTSSBQ8NFR3 76 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 FDCSPQ8NFU4 85 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 DSCR8Q96T75 97 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 TSC22D3Q99576 134 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 SMR3AQ99954 134 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 RPRMQ9NS64 109 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 CFAP54Q96N23 3096 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 FASNP49327 2511 aaKnown RBP0.37□□□□□ -2.35
CD47-203ENST00000398258 TLN1Q9Y490 2541 aaKnown RBP0.37□□□□□ -2.35
CD47-203ENST00000398258 SPTA1P02549 2419 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 PCNX1Q96RV3 2341 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 PPLO60437 1756 aa0.37□□□□□ -2.35
CD47-203ENST00000398258 COL6A5A8TX70 2615 aa0.36□□□□□ -2.35
CD47-203ENST00000398258 CEP295Q9C0D2 2601 aa0.36□□□□□ -2.35
CD47-203ENST00000398258 RANBP2P49792 3224 aaKnown RBP0.36□□□□□ -2.35
CD47-203ENST00000398258 CREBBPQ92793 2442 aa0.36□□□□□ -2.35
CD47-203ENST00000398258 MKI67P46013 3256 aaKnown RBP0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms