RNA–Protein interactions for RNA: ENST00000395145.3

CLDN3-201, Transcript of claudin 3, humanhuman

APPRIS P1 BASIC

Gene CLDN3, Length 1,274 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3-201ENST00000395145 FUSP35637 526 aaKnown RBP eCLIP13.43□□□□□ -0.26
CLDN3-201ENST00000395145 SMAGPQ0VAQ4 97 aa13.43□□□□□ -0.26
CLDN3-201ENST00000395145 TMEM18Q96B42 140 aa13.43□□□□□ -0.26
CLDN3-201ENST00000395145 MAP1LC3AQ9H492 121 aa13.43□□□□□ -0.26
CLDN3-201ENST00000395145 IGLV10-54A0A075B6I4 117 aa13.42□□□□□ -0.26
CLDN3-201ENST00000395145 TIMM21Q9BVV7 248 aa13.42□□□□□ -0.26
CLDN3-201ENST00000395145 CDC42SE2Q9NRR3 84 aa13.42□□□□□ -0.26
CLDN3-201ENST00000395145 UBE2D4Q9Y2X8 147 aa13.42□□□□□ -0.26
CLDN3-201ENST00000395145 KIAA1109Q2LD37 5005 aa13.41□□□□□ -0.26
CLDN3-201ENST00000395145 IGLV5-52A0A0A0MRZ9 124 aa13.4□□□□□ -0.26
CLDN3-201ENST00000395145 MT-ND6P03923 174 aa13.4□□□□□ -0.26
CLDN3-201ENST00000395145 ZNF664Q8N3J9 261 aa13.4□□□□□ -0.26
CLDN3-201ENST00000395145 Q8N8P6 123 aa13.4□□□□□ -0.26
CLDN3-201ENST00000395145 RAB5AP20339 215 aa13.39□□□□□ -0.27
CLDN3-201ENST00000395145 C14orf177Q52M58 125 aa13.39□□□□□ -0.27
CLDN3-201ENST00000395145 DGAT2L7PQ6IED9 249 aa13.39□□□□□ -0.27
CLDN3-201ENST00000395145 SLC7A5P1Q8MH63 180 aa13.39□□□□□ -0.27
CLDN3-201ENST00000395145 IGKV3OR2-268A0A0C4DH90 116 aa13.38□□□□□ -0.27
CLDN3-201ENST00000395145 LOC389332A0A1B0GUA5 103 aa13.38□□□□□ -0.27
CLDN3-201ENST00000395145 USP17L23D6RBM5 183 aa13.38□□□□□ -0.27
CLDN3-201ENST00000395145 RPL39P62891 51 aaKnown RBP13.38□□□□□ -0.27
CLDN3-201ENST00000395145 KIAA1644Q3SXP7 199 aa13.38□□□□□ -0.27
CLDN3-201ENST00000395145 HERC2O95714 4834 aa13.37□□□□□ -0.27
CLDN3-201ENST00000395145 TGIF2-C20orf24A0A0A6YYL0 155 aa13.37□□□□□ -0.27
CLDN3-201ENST00000395145 CDK2AP2O75956 126 aa13.37□□□□□ -0.27
CLDN3-201ENST00000395145 GCSHP23434 173 aa13.37□□□□□ -0.27
CLDN3-201ENST00000395145 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.36□□□□□ -0.27
CLDN3-201ENST00000395145 LINC00959A0A1B0GUT2 108 aa13.36□□□□□ -0.27
CLDN3-201ENST00000395145 K7EMI3 77 aa13.36□□□□□ -0.27
CLDN3-201ENST00000395145 CHCHD10Q8WYQ3 142 aaPredicted RBP13.36□□□□□ -0.27
CLDN3-201ENST00000395145 MRPL18Q9H0U6 180 aaKnown RBP13.36□□□□□ -0.27
CLDN3-201ENST00000395145 NXT2Q9NPJ8 142 aaKnown RBP13.36□□□□□ -0.27
CLDN3-201ENST00000395145 SPANXA1Q9NS26 97 aa13.36□□□□□ -0.27
CLDN3-201ENST00000395145 ALKBH7Q9BT30 221 aaPredicted RBP13.35□□□□□ -0.27
CLDN3-201ENST00000395145 GAGE12HA6NDE8 117 aa13.34□□□□□ -0.27
CLDN3-201ENST00000395145 KRTAP10-1P60331 282 aa13.34□□□□□ -0.27
CLDN3-201ENST00000395145 Q6ZUT4 128 aa13.34□□□□□ -0.27
CLDN3-201ENST00000395145 YPEL4Q96NS1 127 aa13.34□□□□□ -0.27
CLDN3-201ENST00000395145 IFI27P40305 119 aaPredicted RBP13.33□□□□□ -0.28
CLDN3-201ENST00000395145 MRPS36P82909 103 aaKnown RBP13.33□□□□□ -0.28
CLDN3-201ENST00000395145 ORMDL2Q53FV1 153 aa13.33□□□□□ -0.28
CLDN3-201ENST00000395145 FAM104AQ969W3 186 aa13.33□□□□□ -0.28
CLDN3-201ENST00000395145 CCL25O15444 150 aa13.32□□□□□ -0.28
CLDN3-201ENST00000395145 PRSS1P07477 247 aa13.32□□□□□ -0.28
CLDN3-201ENST00000395145 FABP9Q0Z7S8 132 aa13.32□□□□□ -0.28
CLDN3-201ENST00000395145 SS18Q15532 418 aa13.32□□□□□ -0.28
CLDN3-201ENST00000395145 PYGO1Q9Y3Y4 419 aa13.32□□□□□ -0.28
CLDN3-201ENST00000395145 APOBP04114 4563 aaKnown RBP13.32□□□□□ -0.28
CLDN3-201ENST00000395145 RYR1P21817 5038 aa13.31□□□□□ -0.28
CLDN3-201ENST00000395145 FOXI1Q12951 378 aa13.31□□□□□ -0.28
CLDN3-201ENST00000395145 RNASE13Q5GAN3 156 aaKnown RBP13.3□□□□□ -0.28
CLDN3-201ENST00000395145 TRAPPC1Q9Y5R8 145 aa13.3□□□□□ -0.28
CLDN3-201ENST00000395145 C1orf196B1AJZ1 125 aa13.29□□□□□ -0.28
CLDN3-201ENST00000395145 XCL1P47992 114 aa13.29□□□□□ -0.28
CLDN3-201ENST00000395145 CYSLTR1Q9Y271 337 aa13.29□□□□□ -0.28
CLDN3-201ENST00000395145 HSPG2P98160 4391 aa13.29□□□□□ -0.28
CLDN3-201ENST00000395145 LINC01546A6NGU7 62 aa13.28□□□□□ -0.28
CLDN3-201ENST00000395145 CFAP161Q6P656 301 aa13.28□□□□□ -0.28
CLDN3-201ENST00000395145 CD164L2Q6UWJ8 174 aa13.28□□□□□ -0.28
CLDN3-201ENST00000395145 C2orf66Q6UXQ4 117 aa13.28□□□□□ -0.28
CLDN3-201ENST00000395145 C15orf56Q8N910 161 aa13.28□□□□□ -0.28
CLDN3-201ENST00000395145 OPRPNQ99935 248 aaPredicted RBP13.28□□□□□ -0.28
CLDN3-201ENST00000395145 SMCO4Q9NRQ5 59 aa13.28□□□□□ -0.28
CLDN3-201ENST00000395145 PRSS3P2Q8NHM4 247 aa13.27□□□□□ -0.29
CLDN3-201ENST00000395145 IGLV4-3A0A075B6K6 122 aa13.26□□□□□ -0.29
CLDN3-201ENST00000395145 TRAV13-1A0A0B4J241 112 aa13.26□□□□□ -0.29
CLDN3-201ENST00000395145 G0S2P27469 103 aa13.26□□□□□ -0.29
CLDN3-201ENST00000395145 CBLN2Q8IUK8 224 aa13.26□□□□□ -0.29
CLDN3-201ENST00000395145 hDV102S1A0JD36 115 aa13.25□□□□□ -0.29
CLDN3-201ENST00000395145 NPSP0C0P6 89 aa13.25□□□□□ -0.29
CLDN3-201ENST00000395145 CNBPP62633 177 aaKnown RBP13.24□□□□□ -0.29
CLDN3-201ENST00000395145 TMEM141Q96I45 108 aa13.24□□□□□ -0.29
CLDN3-201ENST00000395145 GVQW2A0A096LPI5 108 aaPredicted RBP13.23□□□□□ -0.29
CLDN3-201ENST00000395145 IGIPA6NJ69 53 aa13.23□□□□□ -0.29
CLDN3-201ENST00000395145 XGP55808 180 aa13.23□□□□□ -0.29
CLDN3-201ENST00000395145 LINC01620Q4KN68 170 aa13.23□□□□□ -0.29
CLDN3-201ENST00000395145 Q6ZSA8 131 aa13.23□□□□□ -0.29
CLDN3-201ENST00000395145 TOMM6Q96B49 74 aa13.23□□□□□ -0.29
CLDN3-201ENST00000395145 DNAH8Q96JB1 4490 aa13.22□□□□□ -0.29
CLDN3-201ENST00000395145 IFITM10A6NMD0 228 aa13.22□□□□□ -0.29
CLDN3-201ENST00000395145 C9orf163Q8N9P6 203 aa13.22□□□□□ -0.29
CLDN3-201ENST00000395145 C18orf32Q8TCD1 76 aa13.22□□□□□ -0.29
CLDN3-201ENST00000395145 AP5S1Q9NUS5 200 aa13.22□□□□□ -0.29
CLDN3-201ENST00000395145 IGHV1-58A0A0C4DH39 117 aa13.21□□□□□ -0.29
CLDN3-201ENST00000395145 FA2HQ7L5A8 372 aa13.21□□□□□ -0.29
CLDN3-201ENST00000395145 FAM30AQ9NZY2 134 aa13.21□□□□□ -0.29
CLDN3-201ENST00000395145 LINC01549A6NIU2 74 aa13.2□□□□□ -0.3
CLDN3-201ENST00000395145 COX7A2LO14548 114 aa13.2□□□□□ -0.3
CLDN3-201ENST00000395145 SLPIP03973 132 aa13.2□□□□□ -0.3
CLDN3-201ENST00000395145 TEX43Q6ZNM6 134 aa13.2□□□□□ -0.3
CLDN3-201ENST00000395145 AMELXQ99217 191 aa13.2□□□□□ -0.3
CLDN3-201ENST00000395145 TIMM17AQ99595 171 aa13.2□□□□□ -0.3
CLDN3-201ENST00000395145 HIGD2BQ4VC39 106 aa13.19□□□□□ -0.3
CLDN3-201ENST00000395145 Q6ZN92 141 aa13.19□□□□□ -0.3
CLDN3-201ENST00000395145 LINC00173Q6ZV60 143 aa13.18□□□□□ -0.3
CLDN3-201ENST00000395145 PCLOQ9Y6V0 5065 aa13.17□□□□□ -0.3
CLDN3-201ENST00000395145 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.17□□□□□ -0.3
CLDN3-201ENST00000395145 IGHV3OR16-9A0A0B4J2B5 98 aa13.17□□□□□ -0.3
CLDN3-201ENST00000395145 PAPPA-AS1Q5QFB9 102 aa13.17□□□□□ -0.3
CLDN3-201ENST00000395145 ERASQ7Z444 233 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms