RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 SMIM1B2RUZ4 78 aa16.42■□□□□ 0.22
RARA-202ENST00000394081 COX6A2Q02221 97 aa16.42■□□□□ 0.22
RARA-202ENST00000394081 NRGNQ92686 78 aa16.42■□□□□ 0.22
RARA-202ENST00000394081 OVOL2Q9BRP0 275 aa16.42■□□□□ 0.22
RARA-202ENST00000394081 COX7CP15954 63 aa16.41■□□□□ 0.22
RARA-202ENST00000394081 HIST1H4AP62805 103 aaKnown RBP16.41■□□□□ 0.22
RARA-202ENST00000394081 A0A1B0GX51 115 aa16.4■□□□□ 0.22
RARA-202ENST00000394081 UCNP55089 124 aa16.4■□□□□ 0.22
RARA-202ENST00000394081 SYNJ2BPP57105 145 aa16.4■□□□□ 0.22
RARA-202ENST00000394081 HTN1P15515 57 aa16.4■□□□□ 0.22
RARA-202ENST00000394081 RS1O15537 224 aa16.39■□□□□ 0.21
RARA-202ENST00000394081 HIST2H2BCQ6DN03 193 aa16.39■□□□□ 0.21
RARA-202ENST00000394081 HIST2H2BDQ6DRA6 164 aa16.39■□□□□ 0.21
RARA-202ENST00000394081 C3orf56Q8N813 242 aa16.39■□□□□ 0.21
RARA-202ENST00000394081 COL6A6A6NMZ7 2263 aa16.39■□□□□ 0.21
RARA-202ENST00000394081 LRRC75A-AS1Q8N1F1 130 aa16.39■□□□□ 0.21
RARA-202ENST00000394081 TRAV13-2A0A0B4J235 113 aa16.38■□□□□ 0.21
RARA-202ENST00000394081 ATOX1O00244 68 aa16.38■□□□□ 0.21
RARA-202ENST00000394081 RPL28P46779 137 aaKnown RBP16.38■□□□□ 0.21
RARA-202ENST00000394081 PRIMA1Q86XR5 153 aa16.38■□□□□ 0.21
RARA-202ENST00000394081 LINC00694P0DN24 101 aa16.38■□□□□ 0.21
RARA-202ENST00000394081 CRYGAP11844 174 aa16.38■□□□□ 0.21
RARA-202ENST00000394081 C10orf105Q8TEF2 133 aa16.38■□□□□ 0.21
RARA-202ENST00000394081 SVEP1Q4LDE5 3571 aa16.37■□□□□ 0.21
RARA-202ENST00000394081 SPTA1P02549 2419 aa16.37■□□□□ 0.21
RARA-202ENST00000394081 IGHV3-38A0A0C4DH36 116 aa16.36■□□□□ 0.21
RARA-202ENST00000394081 C11orf72Q8NBR9 251 aa16.36■□□□□ 0.21
RARA-202ENST00000394081 ASH1LQ9NR48 2969 aaKnown RBP16.36■□□□□ 0.21
RARA-202ENST00000394081 ZFYVE26Q68DK2 2539 aa16.36■□□□□ 0.21
RARA-202ENST00000394081 MALP21145 153 aa16.36■□□□□ 0.21
RARA-202ENST00000394081 FAM218AQ96MZ4 157 aa16.35■□□□□ 0.21
RARA-202ENST00000394081 C2orf48Q96LS8 159 aa16.35■□□□□ 0.21
RARA-202ENST00000394081 MSMBP08118 114 aa16.34■□□□□ 0.21
RARA-202ENST00000394081 DEFB131AP59861 70 aa16.34■□□□□ 0.21
RARA-202ENST00000394081 RBMY1BA6NDE4 496 aaKnown RBP16.33■□□□□ 0.2
RARA-202ENST00000394081 RBMY1EA6NEQ0 496 aaKnown RBP16.33■□□□□ 0.2
RARA-202ENST00000394081 J3KT08 172 aa16.33■□□□□ 0.2
RARA-202ENST00000394081 RBMY1DP0C7P1 496 aaKnown RBP16.33■□□□□ 0.2
RARA-202ENST00000394081 HOXD3P31249 432 aaPredicted RBP16.33■□□□□ 0.2
RARA-202ENST00000394081 GAGE2AQ6NT46 116 aa16.33■□□□□ 0.2
RARA-202ENST00000394081 F5H768 121 aa16.33■□□□□ 0.2
RARA-202ENST00000394081 PKD1L2Q7Z442 2459 aa16.32■□□□□ 0.2
RARA-202ENST00000394081 RPS28P62857 69 aaKnown RBP16.32■□□□□ 0.2
RARA-202ENST00000394081 A0A0U1RRA0 63 aa16.31■□□□□ 0.2
RARA-202ENST00000394081 C10orf99Q6UWK7 81 aa16.31■□□□□ 0.2
RARA-202ENST00000394081 UBE2E2Q96LR5 201 aa16.31■□□□□ 0.2
RARA-202ENST00000394081 CRPP02741 224 aa16.3■□□□□ 0.2
RARA-202ENST00000394081 SPTAN1Q13813 2472 aaKnown RBP16.29■□□□□ 0.2
RARA-202ENST00000394081 TRBV10-1A0A0K0K1A3 114 aa16.28■□□□□ 0.2
RARA-202ENST00000394081 OBSCN-AS1Q96MR7 158 aa16.28■□□□□ 0.2
RARA-202ENST00000394081 ITPR1Q14643 2758 aa16.28■□□□□ 0.2
RARA-202ENST00000394081 DNAL4O96015 105 aa16.28■□□□□ 0.2
RARA-202ENST00000394081 INSP01308 110 aa16.27■□□□□ 0.2
RARA-202ENST00000394081 Q6JHZ5 121 aa16.27■□□□□ 0.2
RARA-202ENST00000394081 H0YGX0 51 aa16.26■□□□□ 0.19
RARA-202ENST00000394081 PRM2P04554 102 aa16.26■□□□□ 0.19
RARA-202ENST00000394081 RPL18AQ02543 176 aaKnown RBP16.26■□□□□ 0.19
RARA-202ENST00000394081 CDC42SE2Q9NRR3 84 aa16.26■□□□□ 0.19
RARA-202ENST00000394081 TRAV13-1A0A0B4J241 112 aa16.25■□□□□ 0.19
RARA-202ENST00000394081 IGHV4-59P01825 116 aa16.25■□□□□ 0.19
RARA-202ENST00000394081 RELNP78509 3460 aa16.25■□□□□ 0.19
RARA-202ENST00000394081 FAM208BQ5VWN6 2430 aa16.25■□□□□ 0.19
RARA-202ENST00000394081 RPL36AP83881 106 aaKnown RBP16.25■□□□□ 0.19
RARA-202ENST00000394081 RPL36ALQ969Q0 106 aaKnown RBP16.25■□□□□ 0.19
RARA-202ENST00000394081 ZFHX3Q15911 3703 aa16.25■□□□□ 0.19
RARA-202ENST00000394081 B4DSR2 109 aa16.24■□□□□ 0.19
RARA-202ENST00000394081 Q9HAA7 133 aa16.24■□□□□ 0.19
RARA-202ENST00000394081 NBASA2RRP1 2371 aa16.23■□□□□ 0.19
RARA-202ENST00000394081 AVPP01185 164 aa16.23■□□□□ 0.19
RARA-202ENST00000394081 C19orf84I3L1E1 186 aa16.22■□□□□ 0.19
RARA-202ENST00000394081 CCL19Q99731 98 aa16.22■□□□□ 0.19
RARA-202ENST00000394081 IGHV4-30-2A0A087WSY4 118 aa16.22■□□□□ 0.19
RARA-202ENST00000394081 LINC00337Q8N6G1 96 aa16.22■□□□□ 0.19
RARA-202ENST00000394081 DEFB112Q30KQ8 113 aa16.21■□□□□ 0.19
RARA-202ENST00000394081 KLK5Q9Y337 293 aaPredicted RBP16.21■□□□□ 0.19
RARA-202ENST00000394081 SORL1Q92673 2214 aa16.21■□□□□ 0.19
RARA-202ENST00000394081 IL17DQ8TAD2 202 aa16.21■□□□□ 0.19
RARA-202ENST00000394081 SND1-IT1Q9HBX3 110 aa16.2■□□□□ 0.18
RARA-202ENST00000394081 IGKV2-28A0A075B6P5 120 aa16.2■□□□□ 0.18
RARA-202ENST00000394081 K7EQD1 137 aa16.2■□□□□ 0.18
RARA-202ENST00000394081 IGKV2D-28P01615 120 aa16.2■□□□□ 0.18
RARA-202ENST00000394081 C5orf47Q569G3 176 aa16.2■□□□□ 0.18
RARA-202ENST00000394081 NTM-AS1Q6ZSK4 140 aa16.2■□□□□ 0.18
RARA-202ENST00000394081 MAP6D1Q9H9H5 199 aa16.2■□□□□ 0.18
RARA-202ENST00000394081 TMEM258P61165 79 aa16.19■□□□□ 0.18
RARA-202ENST00000394081 SERP2Q8N6R1 65 aa16.19■□□□□ 0.18
RARA-202ENST00000394081 MIR7-3HGQ8N6C7 128 aa16.18■□□□□ 0.18
RARA-202ENST00000394081 COX7B2Q8TF08 81 aa16.18■□□□□ 0.18
RARA-202ENST00000394081 Q96MF0 132 aa16.18■□□□□ 0.18
RARA-202ENST00000394081 LOC107984640A0A0U1RRK4 108 aa16.17■□□□□ 0.18
RARA-202ENST00000394081 SMIM11BQ8TCY0 68 aa16.17■□□□□ 0.18
RARA-202ENST00000394081 HIVEP3Q5T1R4 2406 aa16.17■□□□□ 0.18
RARA-202ENST00000394081 ATP5J2P56134 94 aa16.17■□□□□ 0.18
RARA-202ENST00000394081 AKAP6Q13023 2319 aa16.16■□□□□ 0.18
RARA-202ENST00000394081 A0A087WYN8 130 aa16.16■□□□□ 0.18
RARA-202ENST00000394081 FAM19A5Q7Z5A7 132 aaPredicted RBP16.16■□□□□ 0.18
RARA-202ENST00000394081 hADV29S1A0JD25 119 aa16.15■□□□□ 0.18
RARA-202ENST00000394081 C14orf132Q9NPU4 83 aa16.15■□□□□ 0.18
RARA-202ENST00000394081 SLURP1P55000 103 aa16.14■□□□□ 0.17
RARA-202ENST00000394081 TMEM243Q9BU79 118 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms