RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 SNCGO76070 127 aa10.04□□□□□ -0.8
TNFSF13-203ENST00000380535 TMEM263Q8WUH6 116 aaKnown RBP10.04□□□□□ -0.8
TNFSF13-203ENST00000380535 MRPL35Q9NZE8 188 aaKnown RBP10.04□□□□□ -0.8
TNFSF13-203ENST00000380535 ORMDL2Q53FV1 153 aa10.04□□□□□ -0.8
TNFSF13-203ENST00000380535 C1orf158Q8N1D5 194 aa10.04□□□□□ -0.8
TNFSF13-203ENST00000380535 C11orf72Q8NBR9 251 aa10.04□□□□□ -0.8
TNFSF13-203ENST00000380535 RPL39LQ96EH5 51 aaKnown RBP10.04□□□□□ -0.8
TNFSF13-203ENST00000380535 TRBV6-5A0A0K0K1A5 114 aa10.03□□□□□ -0.8
TNFSF13-203ENST00000380535 H3BMG7 143 aa10.03□□□□□ -0.8
TNFSF13-203ENST00000380535 KRTAP24-1Q3LI83 254 aa10.03□□□□□ -0.8
TNFSF13-203ENST00000380535 C16orf74Q96GX8 76 aa10.03□□□□□ -0.8
TNFSF13-203ENST00000380535 F8P00451 2351 aa10.03□□□□□ -0.8
TNFSF13-203ENST00000380535 F5H697 171 aa10.02□□□□□ -0.8
TNFSF13-203ENST00000380535 HTN1P15515 57 aa10.02□□□□□ -0.8
TNFSF13-203ENST00000380535 TTTY13Q9BZ97 58 aa10.02□□□□□ -0.8
TNFSF13-203ENST00000380535 NIPBLQ6KC79 2804 aaeCLIP10.02□□□□□ -0.81
TNFSF13-203ENST00000380535 PLNP26678 52 aa10.02□□□□□ -0.81
TNFSF13-203ENST00000380535 GAGE13Q4V321 117 aa10.02□□□□□ -0.81
TNFSF13-203ENST00000380535 SUMO4Q6EEV6 95 aa10.02□□□□□ -0.81
TNFSF13-203ENST00000380535 C3orf56Q8N813 242 aa10.02□□□□□ -0.81
TNFSF13-203ENST00000380535 CHAC1Q9BUX1 264 aa10.02□□□□□ -0.81
TNFSF13-203ENST00000380535 TRBV25-1A0A075B6N4 114 aa10.01□□□□□ -0.81
TNFSF13-203ENST00000380535 A0A087WWL8 130 aa10.01□□□□□ -0.81
TNFSF13-203ENST00000380535 TRAV12-1A0A0B4J245 112 aa10.01□□□□□ -0.81
TNFSF13-203ENST00000380535 ZNF56Q15929 161 aa10.01□□□□□ -0.81
TNFSF13-203ENST00000380535 C9orf153Q5TBE3 101 aa10.01□□□□□ -0.81
TNFSF13-203ENST00000380535 ZFP2Q6ZN57 461 aa10.01□□□□□ -0.81
TNFSF13-203ENST00000380535 TOMM6Q96B49 74 aa10.01□□□□□ -0.81
TNFSF13-203ENST00000380535 PRO0461Q9UI25 63 aa10.01□□□□□ -0.81
TNFSF13-203ENST00000380535 VCYO14598 125 aa10□□□□□ -0.81
TNFSF13-203ENST00000380535 FAM74A4Q5TZK3 123 aa10□□□□□ -0.81
TNFSF13-203ENST00000380535 C10orf126Q8N4M7 172 aa10□□□□□ -0.81
TNFSF13-203ENST00000380535 CARD19Q96LW7 228 aa10□□□□□ -0.81
TNFSF13-203ENST00000380535 F8VRH5 84 aa9.99□□□□□ -0.81
TNFSF13-203ENST00000380535 UQCRQO14949 82 aa9.99□□□□□ -0.81
TNFSF13-203ENST00000380535 DAZ2Q13117 558 aaKnown RBP9.99□□□□□ -0.81
TNFSF13-203ENST00000380535 C3orf22Q8N5N4 141 aa9.99□□□□□ -0.81
TNFSF13-203ENST00000380535 RAB37Q96AX2 223 aa9.99□□□□□ -0.81
TNFSF13-203ENST00000380535 FAM236AA0A1B0GUQ0 79 aa9.99□□□□□ -0.81
TNFSF13-203ENST00000380535 FAM236BA0A1B0GV22 79 aa9.99□□□□□ -0.81
TNFSF13-203ENST00000380535 GIG44P09565 113 aaPredicted RBP9.99□□□□□ -0.81
TNFSF13-203ENST00000380535 SMIM13P0DJ93 91 aa9.99□□□□□ -0.81
TNFSF13-203ENST00000380535 FXYD2P54710 66 aa9.99□□□□□ -0.81
TNFSF13-203ENST00000380535 APOC4P55056 127 aa9.99□□□□□ -0.81
TNFSF13-203ENST00000380535 CSNK1G2-AS1Q8NCQ2 148 aa9.99□□□□□ -0.81
TNFSF13-203ENST00000380535 PPDPFLQ8WWR9 84 aa9.99□□□□□ -0.81
TNFSF13-203ENST00000380535 SCGB3A1Q96QR1 104 aa9.99□□□□□ -0.81
TNFSF13-203ENST00000380535 BAHCC1Q9P281 2608 aa9.99□□□□□ -0.81
TNFSF13-203ENST00000380535 M0QY20 66 aa9.98□□□□□ -0.81
TNFSF13-203ENST00000380535 RRN3P1Q2M238 152 aa9.98□□□□□ -0.81
TNFSF13-203ENST00000380535 LINC00526Q96FQ7 95 aa9.98□□□□□ -0.81
TNFSF13-203ENST00000380535 WFDC10AQ9H1F0 79 aa9.98□□□□□ -0.81
TNFSF13-203ENST00000380535 IGHV3OR16-12A0A075B7B8 117 aa9.98□□□□□ -0.81
TNFSF13-203ENST00000380535 POLR2KP53803 58 aaKnown RBP9.98□□□□□ -0.81
TNFSF13-203ENST00000380535 TRBV27A0A0K0K1C4 114 aa9.97□□□□□ -0.81
TNFSF13-203ENST00000380535 NEXN-AS1Q8NBZ9 246 aa9.97□□□□□ -0.81
TNFSF13-203ENST00000380535 DPH3Q96FX2 82 aa9.97□□□□□ -0.81
TNFSF13-203ENST00000380535 FLNBO75369 2602 aaKnown RBP9.97□□□□□ -0.81
TNFSF13-203ENST00000380535 A0A1B0GWB2 263 aa9.97□□□□□ -0.81
TNFSF13-203ENST00000380535 J3QQQ9 107 aa9.97□□□□□ -0.81
TNFSF13-203ENST00000380535 CFAP126Q5VTH2 177 aa9.97□□□□□ -0.81
TNFSF13-203ENST00000380535 C2orf66Q6UXQ4 117 aa9.97□□□□□ -0.81
TNFSF13-203ENST00000380535 CEND1Q8N111 149 aa9.97□□□□□ -0.81
TNFSF13-203ENST00000380535 MAPKAPK5-AS1Q8N8E1 139 aa9.97□□□□□ -0.81
TNFSF13-203ENST00000380535 CD164L2Q6UWJ8 174 aa9.96□□□□□ -0.82
TNFSF13-203ENST00000380535 PRIMA1Q86XR5 153 aa9.96□□□□□ -0.82
TNFSF13-203ENST00000380535 OVOL2Q9BRP0 275 aa9.96□□□□□ -0.82
TNFSF13-203ENST00000380535 PRM2P04554 102 aa9.95□□□□□ -0.82
TNFSF13-203ENST00000380535 TMEM258P61165 79 aa9.95□□□□□ -0.82
TNFSF13-203ENST00000380535 TRAV4A0A0B4J268 109 aa9.95□□□□□ -0.82
TNFSF13-203ENST00000380535 SDHAF1A6NFY7 115 aa9.95□□□□□ -0.82
TNFSF13-203ENST00000380535 IGHV3-53P01767 116 aa9.95□□□□□ -0.82
TNFSF13-203ENST00000380535 RHOHQ15669 191 aa9.95□□□□□ -0.82
TNFSF13-203ENST00000380535 PYGO1Q9Y3Y4 419 aa9.95□□□□□ -0.82
TNFSF13-203ENST00000380535 PHLDA1Q8WV24 401 aaPredicted RBP9.94□□□□□ -0.82
TNFSF13-203ENST00000380535 TRGV1A0A0A0MS02 117 aa9.94□□□□□ -0.82
TNFSF13-203ENST00000380535 NDUFC2O95298 119 aa9.94□□□□□ -0.82
TNFSF13-203ENST00000380535 PFN2P35080 140 aa9.94□□□□□ -0.82
TNFSF13-203ENST00000380535 E9PLD3 99 aa9.93□□□□□ -0.82
TNFSF13-203ENST00000380535 I3L3M4 83 aa9.93□□□□□ -0.82
TNFSF13-203ENST00000380535 RPL13AP40429 203 aaKnown RBP9.93□□□□□ -0.82
TNFSF13-203ENST00000380535 NHP2Q9NX24 153 aaKnown RBP9.93□□□□□ -0.82
TNFSF13-203ENST00000380535 CYSRT1A8MQ03 144 aa9.92□□□□□ -0.82
TNFSF13-203ENST00000380535 K7ERJ3 54 aa9.92□□□□□ -0.82
TNFSF13-203ENST00000380535 PMAIP1Q13794 54 aa9.92□□□□□ -0.82
TNFSF13-203ENST00000380535 TRBV10-1A0A0K0K1A3 114 aa9.92□□□□□ -0.82
TNFSF13-203ENST00000380535 VPREB1P12018 145 aa9.92□□□□□ -0.82
TNFSF13-203ENST00000380535 LYRM7Q5U5X0 104 aa9.92□□□□□ -0.82
TNFSF13-203ENST00000380535 MYMXA0A1B0GTQ4 84 aa9.91□□□□□ -0.82
TNFSF13-203ENST00000380535 GAGE2AQ6NT46 116 aa9.91□□□□□ -0.82
TNFSF13-203ENST00000380535 SPATA3Q8NHX4 192 aa9.91□□□□□ -0.82
TNFSF13-203ENST00000380535 CRYGAP11844 174 aa9.91□□□□□ -0.82
TNFSF13-203ENST00000380535 HIST1H4GQ99525 98 aa9.91□□□□□ -0.82
TNFSF13-203ENST00000380535 JMJD1CQ15652 2540 aa9.9□□□□□ -0.82
TNFSF13-203ENST00000380535 NACAE9PAV3 2078 aa9.9□□□□□ -0.82
TNFSF13-203ENST00000380535 PLAC8L1A1L4L8 177 aa9.9□□□□□ -0.82
TNFSF13-203ENST00000380535 ATP5G1P05496 136 aa9.9□□□□□ -0.82
TNFSF13-203ENST00000380535 EGFEM1PQ0D2K5 195 aa9.9□□□□□ -0.82
TNFSF13-203ENST00000380535 TMEM141Q96I45 108 aa9.9□□□□□ -0.82
TNFSF13-203ENST00000380535 NOP10Q9NPE3 64 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms