RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 CCDC140Q96MF4 163 aa11.45□□□□□ -0.58
SRPK1-204ENST00000373825 FREM2Q5SZK8 3169 aa11.44□□□□□ -0.58
SRPK1-204ENST00000373825 DEFB123Q8N688 67 aa11.44□□□□□ -0.58
SRPK1-204ENST00000373825 BPESC1Q9GZL8 116 aa11.44□□□□□ -0.58
SRPK1-204ENST00000373825 NDUFA1O15239 70 aa11.44□□□□□ -0.58
SRPK1-204ENST00000373825 RMI2Q96E14 147 aa11.44□□□□□ -0.58
SRPK1-204ENST00000373825 TLN2Q9Y4G6 2542 aa11.44□□□□□ -0.58
SRPK1-204ENST00000373825 TSHBP01222 138 aa11.43□□□□□ -0.58
SRPK1-204ENST00000373825 CLPSL1A2RUU4 121 aa11.43□□□□□ -0.58
SRPK1-204ENST00000373825 ATP5EP2Q5VTU8 51 aa11.43□□□□□ -0.58
SRPK1-204ENST00000373825 TLN1Q9Y490 2541 aaKnown RBP11.43□□□□□ -0.58
SRPK1-204ENST00000373825 SMIM11BQ8TCY0 68 aa11.42□□□□□ -0.58
SRPK1-204ENST00000373825 FAM19A4Q96LR4 140 aa11.42□□□□□ -0.58
SRPK1-204ENST00000373825 IGLV10-54A0A075B6I4 117 aa11.42□□□□□ -0.58
SRPK1-204ENST00000373825 IGHV4OR15-8A0A075B7B6 117 aa11.42□□□□□ -0.58
SRPK1-204ENST00000373825 A0A087WW49 117 aa11.42□□□□□ -0.58
SRPK1-204ENST00000373825 C22orf34Q6ZV56 151 aa11.42□□□□□ -0.58
SRPK1-204ENST00000373825 GPHB5Q86YW7 130 aa11.41□□□□□ -0.58
SRPK1-204ENST00000373825 LRP4O75096 1905 aa11.41□□□□□ -0.58
SRPK1-204ENST00000373825 PMAIP1Q13794 54 aa11.41□□□□□ -0.58
SRPK1-204ENST00000373825 GNLYP22749 145 aa11.4□□□□□ -0.58
SRPK1-204ENST00000373825 ZFAND3Q9H8U3 227 aa11.4□□□□□ -0.58
SRPK1-204ENST00000373825 CCDC168Q8NDH2 2452 aa11.4□□□□□ -0.58
SRPK1-204ENST00000373825 PTPRSQ13332 1948 aa11.39□□□□□ -0.59
SRPK1-204ENST00000373825 NOTCH2Q04721 2471 aa11.39□□□□□ -0.59
SRPK1-204ENST00000373825 A0A0J9YX75 114 aa11.39□□□□□ -0.59
SRPK1-204ENST00000373825 PRORYQ9H606 182 aa11.39□□□□□ -0.59
SRPK1-204ENST00000373825 ABCA2Q9BZC7 2435 aa11.39□□□□□ -0.59
SRPK1-204ENST00000373825 MIFP14174 115 aa11.38□□□□□ -0.59
SRPK1-204ENST00000373825 HTTP42858 3142 aa11.38□□□□□ -0.59
SRPK1-204ENST00000373825 LY6DQ14210 128 aa11.38□□□□□ -0.59
SRPK1-204ENST00000373825 LINC00336Q6ZUF6 198 aa11.38□□□□□ -0.59
SRPK1-204ENST00000373825 APRG1Q8IVJ8 170 aa11.38□□□□□ -0.59
SRPK1-204ENST00000373825 A0A087WYN8 130 aa11.38□□□□□ -0.59
SRPK1-204ENST00000373825 NOP10Q9NPE3 64 aaKnown RBP11.38□□□□□ -0.59
SRPK1-204ENST00000373825 SEM1Q6ZVN7 128 aa11.37□□□□□ -0.59
SRPK1-204ENST00000373825 TRAV7A0A075B6U4 112 aa11.37□□□□□ -0.59
SRPK1-204ENST00000373825 PSPHP1O15172 72 aa11.37□□□□□ -0.59
SRPK1-204ENST00000373825 PRM2P04554 102 aa11.37□□□□□ -0.59
SRPK1-204ENST00000373825 EBI3Q14213 229 aa11.37□□□□□ -0.59
SRPK1-204ENST00000373825 PKD1L2Q7Z442 2459 aa11.37□□□□□ -0.59
SRPK1-204ENST00000373825 EDN2P20800 178 aa11.36□□□□□ -0.59
SRPK1-204ENST00000373825 TRBV7-6A0A0J9YX20 115 aa11.36□□□□□ -0.59
SRPK1-204ENST00000373825 MRPS36P82909 103 aaKnown RBP11.36□□□□□ -0.59
SRPK1-204ENST00000373825 TRBV6-5A0A0K0K1A5 114 aa11.36□□□□□ -0.59
SRPK1-204ENST00000373825 NDUFC1O43677 76 aa11.35□□□□□ -0.59
SRPK1-204ENST00000373825 ANGP03950 147 aaKnown RBP11.35□□□□□ -0.59
SRPK1-204ENST00000373825 SMCR5Q8TEV8 140 aa11.35□□□□□ -0.59
SRPK1-204ENST00000373825 NANOS2P60321 138 aaKnown RBP11.35□□□□□ -0.59
SRPK1-204ENST00000373825 MKI67P46013 3256 aaKnown RBP11.35□□□□□ -0.59
SRPK1-204ENST00000373825 Q8N2B8 174 aa11.35□□□□□ -0.59
SRPK1-204ENST00000373825 PSMG3-AS1Q96PY0 264 aa11.35□□□□□ -0.59
SRPK1-204ENST00000373825 LTBP2Q14767 1821 aa11.34□□□□□ -0.59
SRPK1-204ENST00000373825 C6orf99Q4VX62 202 aa11.34□□□□□ -0.59
SRPK1-204ENST00000373825 USP9XQ93008 2570 aaPredicted RBP11.34□□□□□ -0.59
SRPK1-204ENST00000373825 DOPEY1Q5JWR5 2465 aa11.33□□□□□ -0.6
SRPK1-204ENST00000373825 FAM222AQ5U5X8 452 aa11.33□□□□□ -0.6
SRPK1-204ENST00000373825 TRBV10-1A0A0K0K1A3 114 aa11.33□□□□□ -0.6
SRPK1-204ENST00000373825 SIRPDQ9H106 197 aa11.33□□□□□ -0.6
SRPK1-204ENST00000373825 BPY2O14599 106 aa11.32□□□□□ -0.6
SRPK1-204ENST00000373825 DEFB136Q30KP8 78 aa11.32□□□□□ -0.6
SRPK1-204ENST00000373825 HIGD2BQ4VC39 106 aa11.32□□□□□ -0.6
SRPK1-204ENST00000373825 USP9YO00507 2555 aaPredicted RBP11.32□□□□□ -0.6
SRPK1-204ENST00000373825 FHL2Q14192 279 aa11.32□□□□□ -0.6
SRPK1-204ENST00000373825 CCKP06307 115 aa11.31□□□□□ -0.6
SRPK1-204ENST00000373825 Q8N3U1 123 aa11.31□□□□□ -0.6
SRPK1-204ENST00000373825 C9orf85Q96MD7 179 aa11.31□□□□□ -0.6
SRPK1-204ENST00000373825 FAM19A3Q7Z5A8 133 aa11.3□□□□□ -0.6
SRPK1-204ENST00000373825 GRNP28799 593 aaKnown RBP11.3□□□□□ -0.6
SRPK1-204ENST00000373825 ATP5EP56381 51 aaPredicted RBP11.3□□□□□ -0.6
SRPK1-204ENST00000373825 COX8CQ7Z4L0 72 aa11.3□□□□□ -0.6
SRPK1-204ENST00000373825 K7EQD1 137 aa11.29□□□□□ -0.6
SRPK1-204ENST00000373825 PIP4P1Q86T03 277 aa11.29□□□□□ -0.6
SRPK1-204ENST00000373825 CELA1Q9UNI1 258 aa11.29□□□□□ -0.6
SRPK1-204ENST00000373825 UBE2D4Q9Y2X8 147 aa11.29□□□□□ -0.6
SRPK1-204ENST00000373825 A0A087WZ39 114 aa11.29□□□□□ -0.6
SRPK1-204ENST00000373825 DCANP1Q8TF63 244 aa11.29□□□□□ -0.6
SRPK1-204ENST00000373825 CCL19Q99731 98 aa11.29□□□□□ -0.6
SRPK1-204ENST00000373825 XIRP2A4UGR9 3374 aa11.29□□□□□ -0.6
SRPK1-204ENST00000373825 LINC01546A6NGU7 62 aa11.28□□□□□ -0.6
SRPK1-204ENST00000373825 RPL28P46779 137 aaKnown RBP11.28□□□□□ -0.6
SRPK1-204ENST00000373825 MP68P56378 58 aa11.28□□□□□ -0.6
SRPK1-204ENST00000373825 CHKB-CPT1BH3BT56 60 aa11.28□□□□□ -0.6
SRPK1-204ENST00000373825 CCL18P55774 89 aa11.28□□□□□ -0.6
SRPK1-204ENST00000373825 CHD7Q9P2D1 2997 aa11.28□□□□□ -0.6
SRPK1-204ENST00000373825 C5orf56Q8N8D9 126 aa11.28□□□□□ -0.6
SRPK1-204ENST00000373825 ZNF561-AS1K7EIQ3 104 aa11.27□□□□□ -0.61
SRPK1-204ENST00000373825 Q6ZQY7 126 aa11.27□□□□□ -0.61
SRPK1-204ENST00000373825 COX6A2Q02221 97 aa11.26□□□□□ -0.61
SRPK1-204ENST00000373825 FAM218AQ96MZ4 157 aa11.26□□□□□ -0.61
SRPK1-204ENST00000373825 C3orf84H3BNL1 204 aa11.26□□□□□ -0.61
SRPK1-204ENST00000373825 UNC80Q8N2C7 3258 aa11.26□□□□□ -0.61
SRPK1-204ENST00000373825 F8W735 103 aaPredicted RBP11.26□□□□□ -0.61
SRPK1-204ENST00000373825 ZFP36P26651 326 aaKnown RBP11.26□□□□□ -0.61
SRPK1-204ENST00000373825 PDE6GP18545 87 aa11.25□□□□□ -0.61
SRPK1-204ENST00000373825 HIVEP2P31629 2446 aa11.25□□□□□ -0.61
SRPK1-204ENST00000373825 A6NED7 52 aa11.25□□□□□ -0.61
SRPK1-204ENST00000373825 LINC00242Q5T6M2 205 aa11.25□□□□□ -0.61
SRPK1-204ENST00000373825 HIVEP3Q5T1R4 2406 aa11.24□□□□□ -0.61
SRPK1-204ENST00000373825 PRR3P79522 188 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms