RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 SPTBN4Q9H254 2564 aa8.61□□□□□ -1.03
COPA-202ENST00000368069 FAM236AA0A1B0GUQ0 79 aa8.61□□□□□ -1.03
COPA-202ENST00000368069 FAM236BA0A1B0GV22 79 aa8.61□□□□□ -1.03
COPA-202ENST00000368069 IGLV2-18A0A075B6J9 118 aa8.6□□□□□ -1.03
COPA-202ENST00000368069 LINC00308Q8TCZ7 52 aa8.6□□□□□ -1.03
COPA-202ENST00000368069 IGKV3D-7A0A0C4DH55 119 aa8.6□□□□□ -1.03
COPA-202ENST00000368069 IGKV2D-24A0A075B6R9 120 aa8.6□□□□□ -1.03
COPA-202ENST00000368069 PRO0255Q9UI72 69 aa8.6□□□□□ -1.03
COPA-202ENST00000368069 NDUFA1O15239 70 aa8.6□□□□□ -1.03
COPA-202ENST00000368069 TIRAPP58753 221 aa8.6□□□□□ -1.03
COPA-202ENST00000368069 RANBP2P49792 3224 aaKnown RBP8.59□□□□□ -1.03
COPA-202ENST00000368069 NCR3O14931 201 aa8.59□□□□□ -1.03
COPA-202ENST00000368069 TRBV30A0A0K0K1B3 111 aa8.59□□□□□ -1.03
COPA-202ENST00000368069 SETD2Q9BYW2 2564 aaPredicted RBP8.59□□□□□ -1.03
COPA-202ENST00000368069 CAMK2N2Q96S95 79 aa8.59□□□□□ -1.04
COPA-202ENST00000368069 TRAV26-1A0A087WT03 109 aa8.58□□□□□ -1.04
COPA-202ENST00000368069 SPANXCQ9NY87 97 aa8.58□□□□□ -1.04
COPA-202ENST00000368069 INSL3P51460 131 aa8.58□□□□□ -1.04
COPA-202ENST00000368069 TMEM126AQ9H061 195 aa8.58□□□□□ -1.04
COPA-202ENST00000368069 UBE2D4Q9Y2X8 147 aa8.58□□□□□ -1.04
COPA-202ENST00000368069 PRRC2AP48634 2157 aaKnown RBP8.58□□□□□ -1.04
COPA-202ENST00000368069 PIK3CD-AS1Q5SR53 167 aa8.58□□□□□ -1.04
COPA-202ENST00000368069 IGLV4-69A0A075B6H9 119 aa8.57□□□□□ -1.04
COPA-202ENST00000368069 TRACP01848 142 aa8.57□□□□□ -1.04
COPA-202ENST00000368069 SPAG11BQ08648 103 aa8.57□□□□□ -1.04
COPA-202ENST00000368069 CXCL5P42830 114 aa8.57□□□□□ -1.04
COPA-202ENST00000368069 C1orf43Q9BWL3 253 aa8.57□□□□□ -1.04
COPA-202ENST00000368069 KLK12Q9UKR0 248 aa8.57□□□□□ -1.04
COPA-202ENST00000368069 MKI67P46013 3256 aaKnown RBP8.57□□□□□ -1.04
COPA-202ENST00000368069 RNF183Q96D59 192 aa8.56□□□□□ -1.04
COPA-202ENST00000368069 TSPEAR-AS2P59090 65 aa8.55□□□□□ -1.04
COPA-202ENST00000368069 C14orf132Q9NPU4 83 aa8.55□□□□□ -1.04
COPA-202ENST00000368069 WFDC10AQ9H1F0 79 aa8.55□□□□□ -1.04
COPA-202ENST00000368069 BRCA2P51587 3418 aa8.55□□□□□ -1.04
COPA-202ENST00000368069 MRPS36P82909 103 aaKnown RBP8.54□□□□□ -1.04
COPA-202ENST00000368069 LINC00269Q8N2A0 174 aa8.54□□□□□ -1.04
COPA-202ENST00000368069 FAM222AQ5U5X8 452 aa8.54□□□□□ -1.04
COPA-202ENST00000368069 PTPRBP23467 1997 aa8.54□□□□□ -1.04
COPA-202ENST00000368069 TRBV6-8A0A0A6YYG3 113 aa8.54□□□□□ -1.04
COPA-202ENST00000368069 H7C423 109 aa8.54□□□□□ -1.04
COPA-202ENST00000368069 TIMM17BO60830 172 aa8.54□□□□□ -1.04
COPA-202ENST00000368069 A0A0C4DFX4 3053 aa8.54□□□□□ -1.04
COPA-202ENST00000368069 ABCA12Q86UK0 2595 aa8.54□□□□□ -1.04
COPA-202ENST00000368069 TRBV6-4A0A1B0GX49 114 aa8.54□□□□□ -1.04
COPA-202ENST00000368069 BRI3O95415 125 aa8.54□□□□□ -1.04
COPA-202ENST00000368069 UBE2D1P51668 147 aa8.54□□□□□ -1.04
COPA-202ENST00000368069 RBMY1FQ15415 496 aaKnown RBP8.53□□□□□ -1.04
COPA-202ENST00000368069 A0A1B0GX51 115 aa8.53□□□□□ -1.04
COPA-202ENST00000368069 LINC00643Q86TS7 51 aa8.53□□□□□ -1.04
COPA-202ENST00000368069 DEFB105AQ8NG35 78 aa8.53□□□□□ -1.04
COPA-202ENST00000368069 SPATA25Q9BR10 227 aa8.53□□□□□ -1.04
COPA-202ENST00000368069 JMJD7-PLA2G4BH0Y9G9 81 aa8.53□□□□□ -1.04
COPA-202ENST00000368069 LOC100131303A0A0U1RQF7 123 aa8.53□□□□□ -1.04
COPA-202ENST00000368069 ATOX1O00244 68 aa8.53□□□□□ -1.04
COPA-202ENST00000368069 ZNF843Q8N446 348 aa8.53□□□□□ -1.04
COPA-202ENST00000368069 RMI2Q96E14 147 aa8.53□□□□□ -1.04
COPA-202ENST00000368069 NDUFV3P56181 108 aaKnown RBP8.52□□□□□ -1.05
COPA-202ENST00000368069 POM121L12Q8N7R1 296 aa8.52□□□□□ -1.05
COPA-202ENST00000368069 RPL18AQ02543 176 aaKnown RBP8.51□□□□□ -1.05
COPA-202ENST00000368069 SMIM20Q8N5G0 67 aa8.51□□□□□ -1.05
COPA-202ENST00000368069 IBA57-AS1B1ANH7 110 aa8.51□□□□□ -1.05
COPA-202ENST00000368069 REG3AQ06141 175 aa8.51□□□□□ -1.05
COPA-202ENST00000368069 ODF3L2Q3SX64 289 aa8.51□□□□□ -1.05
COPA-202ENST00000368069 LINC01006Q8NI28 216 aa8.51□□□□□ -1.05
COPA-202ENST00000368069 CHCHD10Q8WYQ3 142 aaPredicted RBP8.51□□□□□ -1.05
COPA-202ENST00000368069 LST1O00453 97 aa8.5□□□□□ -1.05
COPA-202ENST00000368069 XGP55808 180 aa8.5□□□□□ -1.05
COPA-202ENST00000368069 LINC00482Q8N8I6 264 aa8.5□□□□□ -1.05
COPA-202ENST00000368069 CITED1Q99966 193 aa8.5□□□□□ -1.05
COPA-202ENST00000368069 ZNF580Q9UK33 172 aa8.5□□□□□ -1.05
COPA-202ENST00000368069 LAMA3Q16787 3333 aa8.5□□□□□ -1.05
COPA-202ENST00000368069 TMEM256-PLSCR3K7ERE1 68 aa8.5□□□□□ -1.05
COPA-202ENST00000368069 MRAPQ8TCY5 172 aa8.5□□□□□ -1.05
COPA-202ENST00000368069 SMIM9A6NGZ8 99 aa8.49□□□□□ -1.05
COPA-202ENST00000368069 SLPIP03973 132 aa8.49□□□□□ -1.05
COPA-202ENST00000368069 KRTAP10-9P60411 292 aa8.49□□□□□ -1.05
COPA-202ENST00000368069 LINC01546A6NGU7 62 aa8.49□□□□□ -1.05
COPA-202ENST00000368069 LYRM9A8MSI8 78 aa8.49□□□□□ -1.05
COPA-202ENST00000368069 DIRC1Q969H9 104 aa8.49□□□□□ -1.05
COPA-202ENST00000368069 CHCHD7Q9BUK0 85 aa8.49□□□□□ -1.05
COPA-202ENST00000368069 TRANK1O15050 2925 aa8.49□□□□□ -1.05
COPA-202ENST00000368069 NDUFA7O95182 113 aa8.48□□□□□ -1.05
COPA-202ENST00000368069 UBE2D3P61077 147 aa8.48□□□□□ -1.05
COPA-202ENST00000368069 UBE2D2P62837 147 aa8.48□□□□□ -1.05
COPA-202ENST00000368069 RBM3P98179 157 aaKnown RBP8.48□□□□□ -1.05
COPA-202ENST00000368069 LINC00242Q5T6M2 205 aa8.48□□□□□ -1.05
COPA-202ENST00000368069 KIF25-AS1Q9Y6Z4 181 aa8.48□□□□□ -1.05
COPA-202ENST00000368069 AGRNO00468 2067 aa8.48□□□□□ -1.05
COPA-202ENST00000368069 ETDCA0A1B0GVM5 59 aa8.47□□□□□ -1.05
COPA-202ENST00000368069 BBC3Q96PG8 261 aaPredicted RBP8.47□□□□□ -1.05
COPA-202ENST00000368069 CDC42SE2Q9NRR3 84 aa8.47□□□□□ -1.05
COPA-202ENST00000368069 HIGD2BQ4VC39 106 aa8.47□□□□□ -1.05
COPA-202ENST00000368069 AMELXQ99217 191 aa8.46□□□□□ -1.06
COPA-202ENST00000368069 LRRK2Q5S007 2527 aa8.46□□□□□ -1.06
COPA-202ENST00000368069 hADV29S1A0JD25 119 aa8.45□□□□□ -1.06
COPA-202ENST00000368069 UBE2BP63146 152 aa8.45□□□□□ -1.06
COPA-202ENST00000368069 Q6ZSN1 163 aa8.45□□□□□ -1.06
COPA-202ENST00000368069 ADAMTSL4-AS1Q5T5F5 129 aa8.45□□□□□ -1.06
COPA-202ENST00000368069 SDIM1Q6ZPB5 146 aa8.45□□□□□ -1.06
COPA-202ENST00000368069 POLQO75417 2590 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms