RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 SORL1Q92673 2214 aa9.6□□□□□ -0.87
IFT88-202ENST00000351808 LY6HO94772 140 aa9.6□□□□□ -0.87
IFT88-202ENST00000351808 AVPP01185 164 aa9.6□□□□□ -0.87
IFT88-202ENST00000351808 C16orf95Q9H693 158 aa9.6□□□□□ -0.87
IFT88-202ENST00000351808 Q9UF83 564 aa9.6□□□□□ -0.87
IFT88-202ENST00000351808 ATMQ13315 3056 aa9.6□□□□□ -0.87
IFT88-202ENST00000351808 IGKV3-20P01619 116 aa9.6□□□□□ -0.87
IFT88-202ENST00000351808 COX6A2Q02221 97 aa9.6□□□□□ -0.87
IFT88-202ENST00000351808 FAM19A1Q7Z5A9 133 aa9.6□□□□□ -0.87
IFT88-202ENST00000351808 A0A0U1RQV1 116 aa9.59□□□□□ -0.87
IFT88-202ENST00000351808 FP248Q71RG6 208 aaPredicted RBP9.59□□□□□ -0.87
IFT88-202ENST00000351808 LRBAP50851 2863 aa9.59□□□□□ -0.87
IFT88-202ENST00000351808 GVINP1Q7Z2Y8 2422 aa9.58□□□□□ -0.88
IFT88-202ENST00000351808 H7BZZ5 65 aa9.57□□□□□ -0.88
IFT88-202ENST00000351808 KLK9Q2XQG4 91 aa9.57□□□□□ -0.88
IFT88-202ENST00000351808 OBSCN-AS1Q96MR7 158 aa9.57□□□□□ -0.88
IFT88-202ENST00000351808 AKAP6Q13023 2319 aa9.57□□□□□ -0.88
IFT88-202ENST00000351808 COPS9Q8WXC6 57 aa9.57□□□□□ -0.88
IFT88-202ENST00000351808 CHCHD7Q9BUK0 85 aa9.57□□□□□ -0.88
IFT88-202ENST00000351808 RIF1Q5UIP0 2472 aaKnown RBP9.57□□□□□ -0.88
IFT88-202ENST00000351808 LINC00467Q9BRT7 94 aa9.57□□□□□ -0.88
IFT88-202ENST00000351808 COL6A6A6NMZ7 2263 aa9.56□□□□□ -0.88
IFT88-202ENST00000351808 DEFB109BQ30KR1 87 aa9.56□□□□□ -0.88
IFT88-202ENST00000351808 V9GYY9 64 aa9.56□□□□□ -0.88
IFT88-202ENST00000351808 SLPIP03973 132 aa9.56□□□□□ -0.88
IFT88-202ENST00000351808 LYPD5Q6UWN5 251 aa9.56□□□□□ -0.88
IFT88-202ENST00000351808 ENHOQ6UWT2 76 aa9.56□□□□□ -0.88
IFT88-202ENST00000351808 LINC00337Q8N6G1 96 aa9.55□□□□□ -0.88
IFT88-202ENST00000351808 DOPEY2Q9Y3R5 2298 aa9.55□□□□□ -0.88
IFT88-202ENST00000351808 BRK1Q8WUW1 75 aa9.55□□□□□ -0.88
IFT88-202ENST00000351808 IGHV3-38A0A0C4DH36 116 aa9.54□□□□□ -0.88
IFT88-202ENST00000351808 IGLV5-39A0A0G2JS06 123 aa9.54□□□□□ -0.88
IFT88-202ENST00000351808 LECT2O14960 151 aa9.54□□□□□ -0.88
IFT88-202ENST00000351808 CRPP02741 224 aa9.54□□□□□ -0.88
IFT88-202ENST00000351808 RHPN1-AS1Q9BWJ2 59 aa9.54□□□□□ -0.88
IFT88-202ENST00000351808 SPTA1P02549 2419 aa9.54□□□□□ -0.88
IFT88-202ENST00000351808 IGLV5-45A0A087WSX0 123 aa9.54□□□□□ -0.88
IFT88-202ENST00000351808 SMIM26A0A096LP01 95 aa9.54□□□□□ -0.88
IFT88-202ENST00000351808 ARRDC1-AS1Q9H2J1 176 aa9.54□□□□□ -0.88
IFT88-202ENST00000351808 LINC00474Q9P2X8 69 aa9.54□□□□□ -0.88
IFT88-202ENST00000351808 TRAV13-2A0A0B4J235 113 aa9.53□□□□□ -0.88
IFT88-202ENST00000351808 KNCNA6PVL3 124 aa9.53□□□□□ -0.88
IFT88-202ENST00000351808 C1orf195Q5TG92 126 aa9.53□□□□□ -0.88
IFT88-202ENST00000351808 SMIM11BQ8TCY0 68 aa9.53□□□□□ -0.88
IFT88-202ENST00000351808 IGHV1OR15-1A0A075B7D0 117 aa9.53□□□□□ -0.88
IFT88-202ENST00000351808 IGHV3-11P01762 117 aa9.53□□□□□ -0.88
IFT88-202ENST00000351808 NDUFA4O00483 81 aa9.53□□□□□ -0.88
IFT88-202ENST00000351808 MIR7-3HGQ8N6C7 128 aa9.53□□□□□ -0.88
IFT88-202ENST00000351808 OVOL2Q9BRP0 275 aa9.52□□□□□ -0.89
IFT88-202ENST00000351808 PIEZO2Q9H5I5 2752 aa9.52□□□□□ -0.89
IFT88-202ENST00000351808 HTN1P15515 57 aa9.52□□□□□ -0.89
IFT88-202ENST00000351808 CDSNQ15517 529 aa9.52□□□□□ -0.89
IFT88-202ENST00000351808 DGAT2L7PQ6IED9 249 aa9.52□□□□□ -0.89
IFT88-202ENST00000351808 SNURFQ9Y675 71 aa9.52□□□□□ -0.89
IFT88-202ENST00000351808 IGKV2-28A0A075B6P5 120 aa9.51□□□□□ -0.89
IFT88-202ENST00000351808 SMIM1B2RUZ4 78 aa9.51□□□□□ -0.89
IFT88-202ENST00000351808 IGKV2D-28P01615 120 aa9.51□□□□□ -0.89
IFT88-202ENST00000351808 CCKP06307 115 aa9.51□□□□□ -0.89
IFT88-202ENST00000351808 SPINK13Q1W4C9 94 aa9.51□□□□□ -0.89
IFT88-202ENST00000351808 LINC00242Q5T6M2 205 aa9.51□□□□□ -0.89
IFT88-202ENST00000351808 ASH1LQ9NR48 2969 aaKnown RBP9.51□□□□□ -0.89
IFT88-202ENST00000351808 MINOS1-NBL1R4GNA1 71 aa9.51□□□□□ -0.89
IFT88-202ENST00000351808 IGHV3OR16-12A0A075B7B8 117 aa9.51□□□□□ -0.89
IFT88-202ENST00000351808 ZFHX2Q9C0A1 2572 aaPredicted RBP9.51□□□□□ -0.89
IFT88-202ENST00000351808 PF4P02776 101 aa9.5□□□□□ -0.89
IFT88-202ENST00000351808 Q6ZSN1 163 aa9.5□□□□□ -0.89
IFT88-202ENST00000351808 RPL36AP83881 106 aaKnown RBP9.49□□□□□ -0.89
IFT88-202ENST00000351808 RPL36ALQ969Q0 106 aaKnown RBP9.49□□□□□ -0.89
IFT88-202ENST00000351808 RMI2Q96E14 147 aa9.49□□□□□ -0.89
IFT88-202ENST00000351808 SS18Q15532 418 aa9.49□□□□□ -0.89
IFT88-202ENST00000351808 S100A7L2Q5SY68 101 aa9.49□□□□□ -0.89
IFT88-202ENST00000351808 SND1-IT1Q9HBX3 110 aa9.49□□□□□ -0.89
IFT88-202ENST00000351808 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.48□□□□□ -0.89
IFT88-202ENST00000351808 F8WEM9 126 aa9.48□□□□□ -0.89
IFT88-202ENST00000351808 H0YGX0 51 aa9.48□□□□□ -0.89
IFT88-202ENST00000351808 RBM3P98179 157 aaKnown RBP9.48□□□□□ -0.89
IFT88-202ENST00000351808 ZFHX3Q15911 3703 aa9.47□□□□□ -0.89
IFT88-202ENST00000351808 PRM2P04554 102 aa9.47□□□□□ -0.89
IFT88-202ENST00000351808 ATP5EP2Q5VTU8 51 aa9.47□□□□□ -0.89
IFT88-202ENST00000351808 TRAV7A0A075B6U4 112 aa9.46□□□□□ -0.89
IFT88-202ENST00000351808 TRBV7-6A0A0J9YX20 115 aa9.46□□□□□ -0.9
IFT88-202ENST00000351808 ORMDL1Q9P0S3 153 aa9.46□□□□□ -0.9
IFT88-202ENST00000351808 ZFP36P26651 326 aaKnown RBP9.45□□□□□ -0.9
IFT88-202ENST00000351808 C5orf56Q8N8D9 126 aa9.45□□□□□ -0.9
IFT88-202ENST00000351808 KLKP1Q107X0 134 aa9.45□□□□□ -0.9
IFT88-202ENST00000351808 C11orf72Q8NBR9 251 aa9.45□□□□□ -0.9
IFT88-202ENST00000351808 SAA4P35542 130 aa9.45□□□□□ -0.9
IFT88-202ENST00000351808 LINC00482Q8N8I6 264 aa9.44□□□□□ -0.9
IFT88-202ENST00000351808 AKAP13Q12802 2813 aa9.44□□□□□ -0.9
IFT88-202ENST00000351808 ANKHD1Q8IWZ3 2542 aaKnown RBP9.44□□□□□ -0.9
IFT88-202ENST00000351808 OTOGLQ3ZCN5 2332 aa9.44□□□□□ -0.9
IFT88-202ENST00000351808 BPESC1Q9GZL8 116 aa9.44□□□□□ -0.9
IFT88-202ENST00000351808 C2CD3Q4AC94 2353 aa9.44□□□□□ -0.9
IFT88-202ENST00000351808 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.43□□□□□ -0.92e-6■■■□□ 19
IFT88-202ENST00000351808 TRAV10A0A0B4J240 114 aa9.43□□□□□ -0.9
IFT88-202ENST00000351808 C19orf54Q5BKX5 351 aa9.43□□□□□ -0.9
IFT88-202ENST00000351808 CREBBPQ92793 2442 aa9.43□□□□□ -0.9
IFT88-202ENST00000351808 CCL21O00585 134 aa9.42□□□□□ -0.9
IFT88-202ENST00000351808 LINC01560Q8TB33 94 aa9.42□□□□□ -0.9
IFT88-202ENST00000351808 Q96MF0 132 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms