RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 TRBV27A0A0K0K1C4 114 aa11.02□□□□□ -0.64
RAB5C-201ENST00000346213 SDHAF1A6NFY7 115 aa11.02□□□□□ -0.64
RAB5C-201ENST00000346213 PRSS29PA6NIE9 313 aa11.02□□□□□ -0.64
RAB5C-201ENST00000346213 H0Y8G0 127 aa11.02□□□□□ -0.64
RAB5C-201ENST00000346213 RHODO00212 210 aa11.02□□□□□ -0.64
RAB5C-201ENST00000346213 CFAP126Q5VTH2 177 aa11.02□□□□□ -0.64
RAB5C-201ENST00000346213 CCL25O15444 150 aa11.01□□□□□ -0.65
RAB5C-201ENST00000346213 BATFQ16520 125 aa11.01□□□□□ -0.65
RAB5C-201ENST00000346213 CCL18P55774 89 aa11.01□□□□□ -0.65
RAB5C-201ENST00000346213 TOMM6Q96B49 74 aa11.01□□□□□ -0.65
RAB5C-201ENST00000346213 KIR2DL4Q99706 377 aa11.01□□□□□ -0.65
RAB5C-201ENST00000346213 LINC01549A6NIU2 74 aa11□□□□□ -0.65
RAB5C-201ENST00000346213 PAX4O43316 350 aa11□□□□□ -0.65
RAB5C-201ENST00000346213 IGLC3P0DOY3 106 aa11□□□□□ -0.65
RAB5C-201ENST00000346213 TNP2Q05952 138 aa11□□□□□ -0.65
RAB5C-201ENST00000346213 ZFP2Q6ZN57 461 aa11□□□□□ -0.65
RAB5C-201ENST00000346213 UPK3BQ9BT76 320 aa11□□□□□ -0.65
RAB5C-201ENST00000346213 Q9H8V8 135 aa11□□□□□ -0.65
RAB5C-201ENST00000346213 HHLA3Q9XRX5 114 aa11□□□□□ -0.65
RAB5C-201ENST00000346213 MAJINQ3KP22 176 aa10.99□□□□□ -0.65
RAB5C-201ENST00000346213 PRO0255Q9UI72 69 aa10.99□□□□□ -0.65
RAB5C-201ENST00000346213 LRP1BQ9NZR2 4599 aa10.99□□□□□ -0.65
RAB5C-201ENST00000346213 IGHV3-73A0A0B4J1V6 119 aa10.98□□□□□ -0.65
RAB5C-201ENST00000346213 K7EQD1 137 aa10.98□□□□□ -0.65
RAB5C-201ENST00000346213 C2orf66Q6UXQ4 117 aa10.98□□□□□ -0.65
RAB5C-201ENST00000346213 LINC00336Q6ZUF6 198 aa10.98□□□□□ -0.65
RAB5C-201ENST00000346213 NEGR1Q7Z3B1 354 aa10.98□□□□□ -0.65
RAB5C-201ENST00000346213 OR4C5Q8NGB2 326 aa10.98□□□□□ -0.65
RAB5C-201ENST00000346213 PMCHL2Q9BQD1 86 aa10.98□□□□□ -0.65
RAB5C-201ENST00000346213 TRAV4A0A0B4J268 109 aa10.98□□□□□ -0.65
RAB5C-201ENST00000346213 PRSS1P07477 247 aa10.98□□□□□ -0.65
RAB5C-201ENST00000346213 C1orf134Q5TEV5 83 aa10.98□□□□□ -0.65
RAB5C-201ENST00000346213 Q6ZN92 141 aa10.98□□□□□ -0.65
RAB5C-201ENST00000346213 Q6ZSN1 163 aa10.98□□□□□ -0.65
RAB5C-201ENST00000346213 STPG4Q8N801 248 aa10.98□□□□□ -0.65
RAB5C-201ENST00000346213 Q9UF83 564 aa10.98□□□□□ -0.65
RAB5C-201ENST00000346213 DNAH5Q8TE73 4624 aa10.97□□□□□ -0.65
RAB5C-201ENST00000346213 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.97□□□□□ -0.65
RAB5C-201ENST00000346213 ICOSQ9Y6W8 199 aa10.97□□□□□ -0.65
RAB5C-201ENST00000346213 TRGV4A0A0C4DH28 118 aa10.96□□□□□ -0.65
RAB5C-201ENST00000346213 hDV102S1A0JD36 115 aa10.96□□□□□ -0.65
RAB5C-201ENST00000346213 I3L3M4 83 aa10.96□□□□□ -0.65
RAB5C-201ENST00000346213 ODF1Q14990 250 aa10.96□□□□□ -0.65
RAB5C-201ENST00000346213 RHOHQ15669 191 aa10.96□□□□□ -0.65
RAB5C-201ENST00000346213 LYPD5Q6UWN5 251 aa10.96□□□□□ -0.65
RAB5C-201ENST00000346213 DNAJC30Q96LL9 226 aa10.96□□□□□ -0.65
RAB5C-201ENST00000346213 SCGB3A1Q96QR1 104 aa10.96□□□□□ -0.65
RAB5C-201ENST00000346213 KRTAP17-1Q9BYP8 105 aa10.96□□□□□ -0.65
RAB5C-201ENST00000346213 CYSLTR1Q9Y271 337 aa10.96□□□□□ -0.65
RAB5C-201ENST00000346213 RYR1P21817 5038 aa10.96□□□□□ -0.66
RAB5C-201ENST00000346213 K7ERU9 68 aa10.95□□□□□ -0.66
RAB5C-201ENST00000346213 GYPEP15421 78 aa10.95□□□□□ -0.66
RAB5C-201ENST00000346213 ERASQ7Z444 233 aa10.95□□□□□ -0.66
RAB5C-201ENST00000346213 C6orf223Q8N319 242 aa10.95□□□□□ -0.66
RAB5C-201ENST00000346213 TNFRSF18Q9Y5U5 241 aa10.95□□□□□ -0.66
RAB5C-201ENST00000346213 TRAV12-1A0A0B4J245 112 aa10.95□□□□□ -0.66
RAB5C-201ENST00000346213 TMEM238LA0A1B0GVL6 79 aa10.94□□□□□ -0.66
RAB5C-201ENST00000346213 TSHBP01222 138 aa10.94□□□□□ -0.66
RAB5C-201ENST00000346213 WFDC10BQ8IUB3 73 aa10.94□□□□□ -0.66
RAB5C-201ENST00000346213 VPS25Q9BRG1 176 aa10.94□□□□□ -0.66
RAB5C-201ENST00000346213 HSPG2P98160 4391 aa10.93□□□□□ -0.66
RAB5C-201ENST00000346213 Q6ZRN7 208 aaPredicted RBP10.93□□□□□ -0.66
RAB5C-201ENST00000346213 SLC25A29Q8N8R3 303 aa10.93□□□□□ -0.66
RAB5C-201ENST00000346213 NEXN-AS1Q8NBZ9 246 aa10.93□□□□□ -0.66
RAB5C-201ENST00000346213 A0A087WX48 190 aa10.92□□□□□ -0.66
RAB5C-201ENST00000346213 IGIPA6NJ69 53 aa10.92□□□□□ -0.66
RAB5C-201ENST00000346213 OCIAD2Q56VL3 154 aa10.92□□□□□ -0.66
RAB5C-201ENST00000346213 APOBP04114 4563 aaKnown RBP10.91□□□□□ -0.66
RAB5C-201ENST00000346213 PCLOQ9Y6V0 5065 aa10.91□□□□□ -0.66
RAB5C-201ENST00000346213 IGKCP01834 107 aa10.91□□□□□ -0.66
RAB5C-201ENST00000346213 MRPL23Q16540 153 aaKnown RBP10.91□□□□□ -0.66
RAB5C-201ENST00000346213 BAALCQ8WXS3 180 aa10.91□□□□□ -0.66
RAB5C-201ENST00000346213 TMEM141Q96I45 108 aa10.91□□□□□ -0.66
RAB5C-201ENST00000346213 TIMM17AQ99595 171 aa10.91□□□□□ -0.66
RAB5C-201ENST00000346213 TRBV10-1A0A0K0K1A3 114 aa10.9□□□□□ -0.66
RAB5C-201ENST00000346213 DPM2O94777 84 aa10.9□□□□□ -0.66
RAB5C-201ENST00000346213 C20orf203Q8NBC4 194 aa10.9□□□□□ -0.66
RAB5C-201ENST00000346213 DEFB104AQ8WTQ1 72 aa10.9□□□□□ -0.66
RAB5C-201ENST00000346213 CST9LQ9H4G1 147 aa10.9□□□□□ -0.66
RAB5C-201ENST00000346213 MRPL35Q9NZE8 188 aaKnown RBP10.9□□□□□ -0.66
RAB5C-201ENST00000346213 RPL39P62891 51 aaKnown RBP10.89□□□□□ -0.67
RAB5C-201ENST00000346213 RNF151Q2KHN1 245 aa10.89□□□□□ -0.67
RAB5C-201ENST00000346213 TMEM238C9JI98 176 aa10.89□□□□□ -0.67
RAB5C-201ENST00000346213 F8VRH5 84 aa10.89□□□□□ -0.67
RAB5C-201ENST00000346213 SIVA1O15304 175 aa10.89□□□□□ -0.67
RAB5C-201ENST00000346213 LINC00694P0DN24 101 aa10.89□□□□□ -0.67
RAB5C-201ENST00000346213 Q8N3U1 123 aa10.89□□□□□ -0.67
RAB5C-201ENST00000346213 FUSP35637 526 aaKnown RBP eCLIP10.88□□□□□ -0.67
RAB5C-201ENST00000346213 VAMP3Q15836 100 aa10.88□□□□□ -0.67
RAB5C-201ENST00000346213 COX8AP10176 69 aa10.87□□□□□ -0.67
RAB5C-201ENST00000346213 PLNP26678 52 aa10.87□□□□□ -0.67
RAB5C-201ENST00000346213 KRTAP10-2P60368 255 aa10.87□□□□□ -0.67
RAB5C-201ENST00000346213 SLC25A34Q6PIV7 304 aa10.87□□□□□ -0.67
RAB5C-201ENST00000346213 TRBV7-3A0A075B6L6 115 aa10.86□□□□□ -0.67
RAB5C-201ENST00000346213 TRBV6-4A0A1B0GX49 114 aa10.85□□□□□ -0.67
RAB5C-201ENST00000346213 RPL36AP83881 106 aaKnown RBP10.85□□□□□ -0.67
RAB5C-201ENST00000346213 TTC32Q5I0X7 151 aa10.85□□□□□ -0.67
RAB5C-201ENST00000346213 RPL36ALQ969Q0 106 aaKnown RBP10.85□□□□□ -0.67
RAB5C-201ENST00000346213 PYGO1Q9Y3Y4 419 aa10.85□□□□□ -0.67
RAB5C-201ENST00000346213 HINT1P49773 126 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms