RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 RS1O15537 224 aa13.26□□□□□ -0.29
SPSB4-201ENST00000310546 BRD3OSQ6XYD6 125 aa13.25□□□□□ -0.29
SPSB4-201ENST00000310546 TMEM219Q86XT9 240 aa13.25□□□□□ -0.29
SPSB4-201ENST00000310546 KLLNB2CW77 178 aa13.25□□□□□ -0.29
SPSB4-201ENST00000310546 IGHV3-11P01762 117 aa13.25□□□□□ -0.29
SPSB4-201ENST00000310546 IGHV3-73A0A0B4J1V6 119 aa13.24□□□□□ -0.29
SPSB4-201ENST00000310546 PLA2G2AP14555 144 aa13.24□□□□□ -0.29
SPSB4-201ENST00000310546 A0A1B0GX51 115 aa13.23□□□□□ -0.29
SPSB4-201ENST00000310546 ZNF625Q96I27 306 aaPredicted RBP13.23□□□□□ -0.29
SPSB4-201ENST00000310546 CYSTM1Q9H1C7 97 aa13.23□□□□□ -0.29
SPSB4-201ENST00000310546 IGHV4-61A0A0C4DH41 118 aa13.23□□□□□ -0.29
SPSB4-201ENST00000310546 ATP5G1P05496 136 aa13.23□□□□□ -0.29
SPSB4-201ENST00000310546 KRTAP10-9P60411 292 aa13.23□□□□□ -0.29
SPSB4-201ENST00000310546 BAALC-AS2P0C853 105 aa13.23□□□□□ -0.29
SPSB4-201ENST00000310546 KLK9Q9UKQ9 250 aa13.23□□□□□ -0.29
SPSB4-201ENST00000310546 ITPR3Q14573 2671 aa13.22□□□□□ -0.29
SPSB4-201ENST00000310546 FLNAP21333 2647 aaKnown RBP13.22□□□□□ -0.29
SPSB4-201ENST00000310546 FAM104AQ969W3 186 aa13.22□□□□□ -0.29
SPSB4-201ENST00000310546 IGHV4-30-2A0A087WSY4 118 aa13.22□□□□□ -0.29
SPSB4-201ENST00000310546 RHPN1-AS1Q9BWJ2 59 aa13.22□□□□□ -0.29
SPSB4-201ENST00000310546 IGHV3-16A0A0C4DH30 117 aa13.21□□□□□ -0.29
SPSB4-201ENST00000310546 COX7A2LO14548 114 aa13.21□□□□□ -0.29
SPSB4-201ENST00000310546 SAA4P35542 130 aa13.21□□□□□ -0.29
SPSB4-201ENST00000310546 TIRAPP58753 221 aa13.21□□□□□ -0.29
SPSB4-201ENST00000310546 C5orf38Q86SI9 138 aa13.21□□□□□ -0.29
SPSB4-201ENST00000310546 OR13C6PQ8NH95 151 aa13.21□□□□□ -0.29
SPSB4-201ENST00000310546 C2orf48Q96LS8 159 aa13.21□□□□□ -0.29
SPSB4-201ENST00000310546 TRAV13-1A0A0B4J241 112 aa13.21□□□□□ -0.3
SPSB4-201ENST00000310546 LMO4P61968 165 aa13.21□□□□□ -0.3
SPSB4-201ENST00000310546 KLK9Q2XQG4 91 aa13.21□□□□□ -0.3
SPSB4-201ENST00000310546 Q8N2B8 174 aa13.21□□□□□ -0.3
SPSB4-201ENST00000310546 CRYGAP11844 174 aa13.2□□□□□ -0.3
SPSB4-201ENST00000310546 SDIM1Q6ZPB5 146 aa13.19□□□□□ -0.3
SPSB4-201ENST00000310546 KIR2DL5BQ8NHK3 375 aa13.19□□□□□ -0.3
SPSB4-201ENST00000310546 PEMTQ9UBM1 199 aa13.19□□□□□ -0.3
SPSB4-201ENST00000310546 NDUFA4O00483 81 aa13.19□□□□□ -0.3
SPSB4-201ENST00000310546 C9orf85Q96MD7 179 aa13.19□□□□□ -0.3
SPSB4-201ENST00000310546 TRACP01848 142 aa13.19□□□□□ -0.3
SPSB4-201ENST00000310546 CXCL5P42830 114 aa13.19□□□□□ -0.3
SPSB4-201ENST00000310546 J3QKU1 62 aa13.18□□□□□ -0.3
SPSB4-201ENST00000310546 FLNBO75369 2602 aaKnown RBP13.18□□□□□ -0.3
SPSB4-201ENST00000310546 EDN2P20800 178 aa13.18□□□□□ -0.3
SPSB4-201ENST00000310546 CIRBPQ14011 172 aaKnown RBP13.18□□□□□ -0.3
SPSB4-201ENST00000310546 HTN1P15515 57 aa13.17□□□□□ -0.3
SPSB4-201ENST00000310546 PYGO1Q9Y3Y4 419 aa13.17□□□□□ -0.3
SPSB4-201ENST00000310546 FAM223BA6NKX1 122 aa13.17□□□□□ -0.3
SPSB4-201ENST00000310546 ATOX1O00244 68 aa13.17□□□□□ -0.3
SPSB4-201ENST00000310546 PROK1P58294 105 aa13.17□□□□□ -0.3
SPSB4-201ENST00000310546 FAM223AQ8IWN6 122 aa13.17□□□□□ -0.3
SPSB4-201ENST00000310546 C5orf56Q8N8D9 126 aa13.17□□□□□ -0.3
SPSB4-201ENST00000310546 LINC00308Q8TCZ7 52 aa13.17□□□□□ -0.3
SPSB4-201ENST00000310546 CDKN2A-AS1Q9UH64 79 aa13.17□□□□□ -0.3
SPSB4-201ENST00000310546 SIRPDQ9H106 197 aa13.16□□□□□ -0.3
SPSB4-201ENST00000310546 Q9HAA7 133 aa13.16□□□□□ -0.3
SPSB4-201ENST00000310546 TINCRA0A1B0GVN0 87 aa13.16□□□□□ -0.3
SPSB4-201ENST00000310546 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.16□□□□□ -0.3
SPSB4-201ENST00000310546 IGKV2-29A2NJV5 120 aaPredicted RBP13.16□□□□□ -0.3
SPSB4-201ENST00000310546 LY6EQ16553 131 aa13.16□□□□□ -0.3
SPSB4-201ENST00000310546 RPS28P62857 69 aaKnown RBP13.15□□□□□ -0.3
SPSB4-201ENST00000310546 UNC79Q9P2D8 2635 aa13.15□□□□□ -0.3
SPSB4-201ENST00000310546 FAM218AQ96MZ4 157 aa13.15□□□□□ -0.3
SPSB4-201ENST00000310546 Q9UF83 564 aa13.15□□□□□ -0.3
SPSB4-201ENST00000310546 DSCR8Q96T75 97 aa13.14□□□□□ -0.31
SPSB4-201ENST00000310546 Q9H8V8 135 aa13.14□□□□□ -0.31
SPSB4-201ENST00000310546 HOXD3P31249 432 aaPredicted RBP13.14□□□□□ -0.31
SPSB4-201ENST00000310546 SPINK13Q1W4C9 94 aa13.14□□□□□ -0.31
SPSB4-201ENST00000310546 IGKV3D-7A0A0C4DH55 119 aa13.13□□□□□ -0.31
SPSB4-201ENST00000310546 TIMM17BO60830 172 aa13.13□□□□□ -0.31
SPSB4-201ENST00000310546 C22orf24Q9Y442 160 aa13.13□□□□□ -0.31
SPSB4-201ENST00000310546 IGHG2P01859 326 aa13.13□□□□□ -0.31
SPSB4-201ENST00000310546 INAFM2P0DMQ5 153 aa13.12□□□□□ -0.31
SPSB4-201ENST00000310546 TRAV25A0A0B4J276 109 aa13.12□□□□□ -0.31
SPSB4-201ENST00000310546 IGHV4-38-2P0DP08 117 aa13.12□□□□□ -0.31
SPSB4-201ENST00000310546 BEAN1Q3B7T3 259 aa13.12□□□□□ -0.31
SPSB4-201ENST00000310546 DPH3Q96FX2 82 aa13.12□□□□□ -0.31
SPSB4-201ENST00000310546 IGHV1OR15-1A0A075B7D0 117 aa13.12□□□□□ -0.31
SPSB4-201ENST00000310546 KNCNA6PVL3 124 aa13.11□□□□□ -0.31
SPSB4-201ENST00000310546 NDUFA1O15239 70 aa13.11□□□□□ -0.31
SPSB4-201ENST00000310546 HIST1H4AP62805 103 aaKnown RBP13.11□□□□□ -0.31
SPSB4-201ENST00000310546 A0A087WVE0 104 aa13.11□□□□□ -0.31
SPSB4-201ENST00000310546 PF4V1P10720 104 aa13.11□□□□□ -0.31
SPSB4-201ENST00000310546 SOSTDC1Q6X4U4 206 aa13.11□□□□□ -0.31
SPSB4-201ENST00000310546 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.11□□□□□ -0.31
SPSB4-201ENST00000310546 PIMREGQ9BSJ6 248 aa13.11□□□□□ -0.31
SPSB4-201ENST00000310546 RPL18AQ02543 176 aaKnown RBP13.1□□□□□ -0.31
SPSB4-201ENST00000310546 DNAL4O96015 105 aa13.1□□□□□ -0.31
SPSB4-201ENST00000310546 C4orf26Q17RF5 130 aa13.1□□□□□ -0.31
SPSB4-201ENST00000310546 UBE2D4Q9Y2X8 147 aa13.1□□□□□ -0.31
SPSB4-201ENST00000310546 NOTCH3Q9UM47 2321 aa13.1□□□□□ -0.31
SPSB4-201ENST00000310546 IGHV3-38A0A0C4DH36 116 aa13.09□□□□□ -0.31
SPSB4-201ENST00000310546 C2CD3Q4AC94 2353 aa13.09□□□□□ -0.31
SPSB4-201ENST00000310546 AVPP01185 164 aa13.09□□□□□ -0.31
SPSB4-201ENST00000310546 C10orf105Q8TEF2 133 aa13.09□□□□□ -0.31
SPSB4-201ENST00000310546 RNF152Q8N8N0 203 aa13.08□□□□□ -0.32
SPSB4-201ENST00000310546 OXTP01178 125 aa13.08□□□□□ -0.32
SPSB4-201ENST00000310546 LINC00467Q9BRT7 94 aa13.08□□□□□ -0.32
SPSB4-201ENST00000310546 C14orf132Q9NPU4 83 aa13.08□□□□□ -0.32
SPSB4-201ENST00000310546 MALP21145 153 aa13.07□□□□□ -0.32
SPSB4-201ENST00000310546 TMEM258P61165 79 aa13.07□□□□□ -0.32
SPSB4-201ENST00000310546 COX6A2Q02221 97 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms