RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 C14orf177Q52M58 125 aa11.84□□□□□ -0.51
USP42-201ENST00000306177 IGLV1-40P01703 118 aa11.84□□□□□ -0.51
USP42-201ENST00000306177 TCL1BO95988 128 aa11.84□□□□□ -0.51
USP42-201ENST00000306177 TRBV6-8A0A0A6YYG3 113 aa11.83□□□□□ -0.52
USP42-201ENST00000306177 LINC00482Q8N8I6 264 aa11.83□□□□□ -0.52
USP42-201ENST00000306177 SHISA2Q6UWI4 295 aa11.83□□□□□ -0.52
USP42-201ENST00000306177 DEFB131BA0A096LNP1 70 aa11.83□□□□□ -0.52
USP42-201ENST00000306177 TRBV27A0A0K0K1C4 114 aa11.83□□□□□ -0.52
USP42-201ENST00000306177 PDE6GP18545 87 aa11.83□□□□□ -0.52
USP42-201ENST00000306177 TRBV6-5A0A0K0K1A5 114 aa11.83□□□□□ -0.52
USP42-201ENST00000306177 HILS1P60008 231 aa11.83□□□□□ -0.52
USP42-201ENST00000306177 FAM236AA0A1B0GUQ0 79 aa11.82□□□□□ -0.52
USP42-201ENST00000306177 FAM236BA0A1B0GV22 79 aa11.82□□□□□ -0.52
USP42-201ENST00000306177 A0A1B0GX51 115 aa11.82□□□□□ -0.52
USP42-201ENST00000306177 SVIPQ8NHG7 77 aa11.82□□□□□ -0.52
USP42-201ENST00000306177 LINC01006Q8NI28 216 aa11.82□□□□□ -0.52
USP42-201ENST00000306177 LY6G6DO95868 133 aa11.82□□□□□ -0.52
USP42-201ENST00000306177 RNASE3P12724 160 aaKnown RBP11.81□□□□□ -0.52
USP42-201ENST00000306177 PTH2Q96A98 100 aa11.81□□□□□ -0.52
USP42-201ENST00000306177 RANBP2P49792 3224 aaKnown RBP11.81□□□□□ -0.52
USP42-201ENST00000306177 SPATA25Q9BR10 227 aa11.81□□□□□ -0.52
USP42-201ENST00000306177 KLLNB2CW77 178 aa11.81□□□□□ -0.52
USP42-201ENST00000306177 PROK1P58294 105 aa11.81□□□□□ -0.52
USP42-201ENST00000306177 SPANXB1Q9NS25 103 aaPredicted RBP11.81□□□□□ -0.52
USP42-201ENST00000306177 DSCAML1Q8TD84 2053 aa11.81□□□□□ -0.52
USP42-201ENST00000306177 CRYGDP07320 174 aa11.8□□□□□ -0.52
USP42-201ENST00000306177 Q6ZS46 218 aa11.8□□□□□ -0.52
USP42-201ENST00000306177 PYGO1Q9Y3Y4 419 aa11.8□□□□□ -0.52
USP42-201ENST00000306177 C5orf42Q9H799 3197 aa11.8□□□□□ -0.52
USP42-201ENST00000306177 MP68P56378 58 aa11.8□□□□□ -0.52
USP42-201ENST00000306177 PRR9Q5T870 116 aa11.8□□□□□ -0.52
USP42-201ENST00000306177 TLN2Q9Y4G6 2542 aa11.8□□□□□ -0.52
USP42-201ENST00000306177 IBA57-AS1B1ANH7 110 aa11.8□□□□□ -0.52
USP42-201ENST00000306177 CDH23Q9H251 3354 aa11.79□□□□□ -0.52
USP42-201ENST00000306177 IGKV2-24A0A0C4DH68 120 aa11.79□□□□□ -0.52
USP42-201ENST00000306177 G3V4G9 280 aa11.79□□□□□ -0.52
USP42-201ENST00000306177 C11orf21Q9P2W6 132 aa11.79□□□□□ -0.52
USP42-201ENST00000306177 COL5A1P20908 1838 aaPredicted RBP11.79□□□□□ -0.52
USP42-201ENST00000306177 NRACQ8N912 160 aa11.78□□□□□ -0.52
USP42-201ENST00000306177 IGKV2D-26A0A0A0MRZ7 120 aa11.78□□□□□ -0.52
USP42-201ENST00000306177 B9D2Q9BPU9 175 aa11.78□□□□□ -0.52
USP42-201ENST00000306177 C14orf132Q9NPU4 83 aa11.78□□□□□ -0.52
USP42-201ENST00000306177 ATG2AQ2TAZ0 1938 aa11.78□□□□□ -0.52
USP42-201ENST00000306177 LINC00308Q8TCZ7 52 aa11.78□□□□□ -0.52
USP42-201ENST00000306177 C18orf65Q6ZTR6 163 aa11.77□□□□□ -0.52
USP42-201ENST00000306177 FAM110AQ9BQ89 295 aa11.77□□□□□ -0.52
USP42-201ENST00000306177 MAPKAPK5-AS1Q8N8E1 139 aa11.77□□□□□ -0.52
USP42-201ENST00000306177 USP9XQ93008 2570 aaPredicted RBP11.77□□□□□ -0.53
USP42-201ENST00000306177 DCANP1Q8TF63 244 aa11.77□□□□□ -0.53
USP42-201ENST00000306177 AVPP01185 164 aa11.77□□□□□ -0.53
USP42-201ENST00000306177 CHKB-CPT1BH3BT56 60 aa11.76□□□□□ -0.53
USP42-201ENST00000306177 JMJD1CQ15652 2540 aa11.76□□□□□ -0.53
USP42-201ENST00000306177 TSHBP01222 138 aa11.76□□□□□ -0.53
USP42-201ENST00000306177 TP73-AS1Q9UF72 201 aa11.76□□□□□ -0.53
USP42-201ENST00000306177 XIRP2A4UGR9 3374 aa11.76□□□□□ -0.53
USP42-201ENST00000306177 Q8N976 141 aa11.76□□□□□ -0.53
USP42-201ENST00000306177 C9orf85Q96MD7 179 aa11.76□□□□□ -0.53
USP42-201ENST00000306177 WFDC9Q8NEX5 89 aa11.75□□□□□ -0.53
USP42-201ENST00000306177 BBC3Q96PG8 261 aaPredicted RBP11.75□□□□□ -0.53
USP42-201ENST00000306177 C4orf48Q5BLP8 95 aa11.75□□□□□ -0.53
USP42-201ENST00000306177 PRB2P02812 416 aaPredicted RBP11.74□□□□□ -0.53
USP42-201ENST00000306177 LINC00643Q86TS7 51 aa11.74□□□□□ -0.53
USP42-201ENST00000306177 ABCA12Q86UK0 2595 aa11.74□□□□□ -0.53
USP42-201ENST00000306177 A0A1W2PPR1 153 aa11.73□□□□□ -0.53
USP42-201ENST00000306177 PIK3CD-AS1Q5SR53 167 aa11.73□□□□□ -0.53
USP42-201ENST00000306177 SPTBN4Q9H254 2564 aa11.73□□□□□ -0.53
USP42-201ENST00000306177 RBX1P62877 108 aa11.73□□□□□ -0.53
USP42-201ENST00000306177 HIGD2AQ9BW72 106 aa11.73□□□□□ -0.53
USP42-201ENST00000306177 J3KT08 172 aa11.73□□□□□ -0.53
USP42-201ENST00000306177 POLR2KP53803 58 aaKnown RBP11.73□□□□□ -0.53
USP42-201ENST00000306177 WFDC10AQ9H1F0 79 aa11.73□□□□□ -0.53
USP42-201ENST00000306177 CHD8Q9HCK8 2581 aa11.72□□□□□ -0.53
USP42-201ENST00000306177 PLA2G2AP14555 144 aa11.72□□□□□ -0.53
USP42-201ENST00000306177 KRTAP10-9P60411 292 aa11.72□□□□□ -0.53
USP42-201ENST00000306177 CNFNQ9BYD5 112 aa11.72□□□□□ -0.53
USP42-201ENST00000306177 ZFYVE26Q68DK2 2539 aa11.71□□□□□ -0.53
USP42-201ENST00000306177 KIR2DL5BQ8NHK3 375 aa11.71□□□□□ -0.53
USP42-201ENST00000306177 RNF183Q96D59 192 aa11.71□□□□□ -0.53
USP42-201ENST00000306177 USP9YO00507 2555 aaPredicted RBP11.71□□□□□ -0.54
USP42-201ENST00000306177 TRAV10A0A0B4J240 114 aa11.7□□□□□ -0.54
USP42-201ENST00000306177 UBE2D4Q9Y2X8 147 aa11.7□□□□□ -0.54
USP42-201ENST00000306177 HTTP42858 3142 aa11.7□□□□□ -0.54
USP42-201ENST00000306177 TRBV30A0A0K0K1B3 111 aa11.7□□□□□ -0.54
USP42-201ENST00000306177 TIMM17BO60830 172 aa11.7□□□□□ -0.54
USP42-201ENST00000306177 MRPS12O15235 138 aaKnown RBP11.7□□□□□ -0.54
USP42-201ENST00000306177 TRIAP1O43715 76 aa11.7□□□□□ -0.54
USP42-201ENST00000306177 TEX49A0A1B0GTD5 131 aa11.69□□□□□ -0.54
USP42-201ENST00000306177 CD164L2Q6UWJ8 174 aa11.69□□□□□ -0.54
USP42-201ENST00000306177 XAGE1AQ9HD64 81 aa11.69□□□□□ -0.54
USP42-201ENST00000306177 DOPEY1Q5JWR5 2465 aa11.69□□□□□ -0.54
USP42-201ENST00000306177 USP34Q70CQ2 3546 aa11.69□□□□□ -0.54
USP42-201ENST00000306177 MRPS36P82909 103 aaKnown RBP11.69□□□□□ -0.54
USP42-201ENST00000306177 SYCNQ0VAF6 134 aa11.69□□□□□ -0.54
USP42-201ENST00000306177 H0Y9J4 135 aa11.68□□□□□ -0.54
USP42-201ENST00000306177 CRIP2P52943 208 aaPredicted RBP11.68□□□□□ -0.54
USP42-201ENST00000306177 LOC100131303A0A0U1RQF7 123 aa11.67□□□□□ -0.54
USP42-201ENST00000306177 BPY2O14599 106 aa11.67□□□□□ -0.54
USP42-201ENST00000306177 FAM19A1Q7Z5A9 133 aa11.67□□□□□ -0.54
USP42-201ENST00000306177 A8MZ25 164 aa11.67□□□□□ -0.54
USP42-201ENST00000306177 GAS8-AS1O95177 125 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms