RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 TRBV6-4A0A1B0GX49 114 aa11.4□□□□□ -0.58
TIMP3-201ENST00000266085 U3KQK5 164 aa11.4□□□□□ -0.58
TIMP3-201ENST00000266085 REG3AQ06141 175 aa11.4□□□□□ -0.58
TIMP3-201ENST00000266085 HTTP42858 3142 aa11.4□□□□□ -0.58
TIMP3-201ENST00000266085 TEN1Q86WV5 123 aa11.4□□□□□ -0.59
TIMP3-201ENST00000266085 PROK1P58294 105 aa11.39□□□□□ -0.59
TIMP3-201ENST00000266085 TRBV6-5A0A0K0K1A5 114 aa11.39□□□□□ -0.59
TIMP3-201ENST00000266085 PRM2P04554 102 aa11.39□□□□□ -0.59
TIMP3-201ENST00000266085 SPANXDQ9BXN6 97 aa11.39□□□□□ -0.59
TIMP3-201ENST00000266085 C5orf42Q9H799 3197 aa11.39□□□□□ -0.59
TIMP3-201ENST00000266085 TNRC6BQ9UPQ9 1833 aaKnown RBP11.39□□□□□ -0.59
TIMP3-201ENST00000266085 A0A0J9YXY3 114 aa11.38□□□□□ -0.59
TIMP3-201ENST00000266085 WFDC2Q14508 124 aa11.38□□□□□ -0.59
TIMP3-201ENST00000266085 DEFB131BA0A096LNP1 70 aa11.38□□□□□ -0.59
TIMP3-201ENST00000266085 LECT2O14960 151 aa11.38□□□□□ -0.59
TIMP3-201ENST00000266085 RS1O15537 224 aa11.38□□□□□ -0.59
TIMP3-201ENST00000266085 ZNF22P17026 224 aaPredicted RBP11.38□□□□□ -0.59
TIMP3-201ENST00000266085 MIAQ16674 131 aa11.38□□□□□ -0.59
TIMP3-201ENST00000266085 C9orf153Q5TBE3 101 aa11.38□□□□□ -0.59
TIMP3-201ENST00000266085 EDN2P20800 178 aa11.37□□□□□ -0.59
TIMP3-201ENST00000266085 TRBV6-8A0A0A6YYG3 113 aa11.37□□□□□ -0.59
TIMP3-201ENST00000266085 H7C423 109 aa11.37□□□□□ -0.59
TIMP3-201ENST00000266085 FUSP35637 526 aaKnown RBP eCLIP11.37□□□□□ -0.59
TIMP3-201ENST00000266085 NFE4Q86UQ8 179 aa11.37□□□□□ -0.59
TIMP3-201ENST00000266085 NCR3O14931 201 aa11.37□□□□□ -0.59
TIMP3-201ENST00000266085 ACYP1P07311 99 aa11.37□□□□□ -0.59
TIMP3-201ENST00000266085 CRIP2P52943 208 aaPredicted RBP11.37□□□□□ -0.59
TIMP3-201ENST00000266085 MRPS12O15235 138 aaKnown RBP11.36□□□□□ -0.59
TIMP3-201ENST00000266085 hADV29S1A0JD25 119 aa11.36□□□□□ -0.59
TIMP3-201ENST00000266085 NRACQ8N912 160 aa11.36□□□□□ -0.59
TIMP3-201ENST00000266085 CITED1Q99966 193 aa11.36□□□□□ -0.59
TIMP3-201ENST00000266085 Q8N976 141 aa11.36□□□□□ -0.59
TIMP3-201ENST00000266085 IL17DQ8TAD2 202 aa11.35□□□□□ -0.59
TIMP3-201ENST00000266085 SPATA25Q9BR10 227 aa11.35□□□□□ -0.59
TIMP3-201ENST00000266085 CHCHD10Q8WYQ3 142 aaPredicted RBP11.35□□□□□ -0.59
TIMP3-201ENST00000266085 DIRC1Q969H9 104 aa11.35□□□□□ -0.59
TIMP3-201ENST00000266085 SPANXCQ9NY87 97 aa11.35□□□□□ -0.59
TIMP3-201ENST00000266085 OXLD1Q5BKU9 147 aa11.34□□□□□ -0.59
TIMP3-201ENST00000266085 CNFNQ9BYD5 112 aa11.34□□□□□ -0.59
TIMP3-201ENST00000266085 ADAMTS20P59510 1910 aa11.34□□□□□ -0.59
TIMP3-201ENST00000266085 CRYGDP07320 174 aa11.34□□□□□ -0.59
TIMP3-201ENST00000266085 HIGD2BQ4VC39 106 aa11.34□□□□□ -0.59
TIMP3-201ENST00000266085 C9orf85Q96MD7 179 aa11.34□□□□□ -0.59
TIMP3-201ENST00000266085 CLEC2BQ92478 149 aa11.34□□□□□ -0.59
TIMP3-201ENST00000266085 UFSP1Q6NVU6 142 aa11.34□□□□□ -0.59
TIMP3-201ENST00000266085 H3BT86 120 aa11.33□□□□□ -0.6
TIMP3-201ENST00000266085 NDUFA7O95182 113 aa11.33□□□□□ -0.6
TIMP3-201ENST00000266085 ODF3L2Q3SX64 289 aa11.33□□□□□ -0.6
TIMP3-201ENST00000266085 PYGO1Q9Y3Y4 419 aa11.33□□□□□ -0.6
TIMP3-201ENST00000266085 IGKV2D-26A0A0A0MRZ7 120 aa11.33□□□□□ -0.6
TIMP3-201ENST00000266085 POLR2KP53803 58 aaKnown RBP11.33□□□□□ -0.6
TIMP3-201ENST00000266085 CHD9Q3L8U1 2897 aa11.32□□□□□ -0.6
TIMP3-201ENST00000266085 IGHV4-28A0A0C4DH34 117 aa11.32□□□□□ -0.6
TIMP3-201ENST00000266085 TRBV10-2A0A0K0K1G8 114 aa11.32□□□□□ -0.6
TIMP3-201ENST00000266085 TMEM223A0PJW6 202 aa11.32□□□□□ -0.6
TIMP3-201ENST00000266085 JMJD7-PLA2G4BH0Y9G9 81 aa11.31□□□□□ -0.6
TIMP3-201ENST00000266085 KIR2DL5BQ8NHK3 375 aa11.31□□□□□ -0.6
TIMP3-201ENST00000266085 H3BQ85 93 aa11.31□□□□□ -0.6
TIMP3-201ENST00000266085 TSHBP01222 138 aa11.3□□□□□ -0.6
TIMP3-201ENST00000266085 TP73-AS1Q9UF72 201 aa11.3□□□□□ -0.6
TIMP3-201ENST00000266085 CENPEQ02224 2701 aa11.3□□□□□ -0.6
TIMP3-201ENST00000266085 BRI3O95415 125 aa11.3□□□□□ -0.6
TIMP3-201ENST00000266085 TRACP01848 142 aa11.3□□□□□ -0.6
TIMP3-201ENST00000266085 A0A0B4J2C4 111 aa11.3□□□□□ -0.6
TIMP3-201ENST00000266085 RBX1P62877 108 aa11.3□□□□□ -0.6
TIMP3-201ENST00000266085 GAS8-AS1O95177 125 aa11.29□□□□□ -0.6
TIMP3-201ENST00000266085 USP24Q9UPU5 2620 aa11.29□□□□□ -0.6
TIMP3-201ENST00000266085 LAMA3Q16787 3333 aa11.29□□□□□ -0.6
TIMP3-201ENST00000266085 PRB2P02812 416 aaPredicted RBP11.29□□□□□ -0.6
TIMP3-201ENST00000266085 UBE2AP49459 152 aa11.29□□□□□ -0.6
TIMP3-201ENST00000266085 MAPKAPK5-AS1Q8N8E1 139 aa11.29□□□□□ -0.6
TIMP3-201ENST00000266085 ZNF580Q9UK33 172 aa11.29□□□□□ -0.6
TIMP3-201ENST00000266085 MKI67P46013 3256 aaKnown RBP11.28□□□□□ -0.6
TIMP3-201ENST00000266085 PIK3CD-AS1Q5SR53 167 aa11.28□□□□□ -0.6
TIMP3-201ENST00000266085 IBA57-AS1B1ANH7 110 aa11.28□□□□□ -0.6
TIMP3-201ENST00000266085 IGKV2-24A0A0C4DH68 120 aa11.27□□□□□ -0.6
TIMP3-201ENST00000266085 FOXI1Q12951 378 aa11.27□□□□□ -0.6
TIMP3-201ENST00000266085 C14orf177Q52M58 125 aa11.27□□□□□ -0.6
TIMP3-201ENST00000266085 A0A0C4DFX4 3053 aa11.27□□□□□ -0.61
TIMP3-201ENST00000266085 IGLV1-51P01701 117 aa11.26□□□□□ -0.61
TIMP3-201ENST00000266085 MRGPRG-AS1Q2M3A8 158 aa11.26□□□□□ -0.61
TIMP3-201ENST00000266085 LOC100131303A0A0U1RQF7 123 aa11.26□□□□□ -0.61
TIMP3-201ENST00000266085 TMEM256-PLSCR3K7ERE1 68 aa11.26□□□□□ -0.61
TIMP3-201ENST00000266085 PTH2Q96A98 100 aa11.26□□□□□ -0.61
TIMP3-201ENST00000266085 IGHV4-30-4P0DP06 118 aa11.26□□□□□ -0.61
TIMP3-201ENST00000266085 SPANXB1Q9NS25 103 aaPredicted RBP11.26□□□□□ -0.61
TIMP3-201ENST00000266085 RBM3P98179 157 aaKnown RBP11.25□□□□□ -0.61
TIMP3-201ENST00000266085 LINC00308Q8TCZ7 52 aa11.25□□□□□ -0.61
TIMP3-201ENST00000266085 TCL1BO95988 128 aa11.25□□□□□ -0.61
TIMP3-201ENST00000266085 COX7BP24311 80 aa11.25□□□□□ -0.61
TIMP3-201ENST00000266085 NREPQ16612 68 aa11.25□□□□□ -0.61
TIMP3-201ENST00000266085 RNASE8Q8TDE3 154 aaKnown RBP11.25□□□□□ -0.61
TIMP3-201ENST00000266085 TRAV10A0A0B4J240 114 aa11.24□□□□□ -0.61
TIMP3-201ENST00000266085 TET2Q6N021 2002 aaPredicted RBP11.24□□□□□ -0.61
TIMP3-201ENST00000266085 AGRNO00468 2067 aa11.23□□□□□ -0.61
TIMP3-201ENST00000266085 KPRPQ5T749 579 aaPredicted RBP11.23□□□□□ -0.61
TIMP3-201ENST00000266085 UBE2D4Q9Y2X8 147 aa11.23□□□□□ -0.61
TIMP3-201ENST00000266085 MGAM2Q2M2H8 2515 aa11.23□□□□□ -0.61
TIMP3-201ENST00000266085 IGKV3D-7A0A0C4DH55 119 aa11.22□□□□□ -0.61
TIMP3-201ENST00000266085 XAGE1AQ9HD64 81 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms