RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 TRBV6-8A0A0A6YYG3 113 aa12.3□□□□□ -0.44
PHRF1-201ENST00000264555 CDK2AP2O75956 126 aa12.3□□□□□ -0.44
PHRF1-201ENST00000264555 RPL18AQ02543 176 aaKnown RBP12.3□□□□□ -0.44
PHRF1-201ENST00000264555 LY6G6DO95868 133 aa12.3□□□□□ -0.44
PHRF1-201ENST00000264555 LINC00269Q8N2A0 174 aa12.29□□□□□ -0.44
PHRF1-201ENST00000264555 LECT2O14960 151 aa12.28□□□□□ -0.44
PHRF1-201ENST00000264555 REG3AQ06141 175 aa12.28□□□□□ -0.44
PHRF1-201ENST00000264555 NCR3O14931 201 aa12.28□□□□□ -0.44
PHRF1-201ENST00000264555 RBMY1FQ15415 496 aaKnown RBP12.28□□□□□ -0.44
PHRF1-201ENST00000264555 PTH2Q96A98 100 aa12.28□□□□□ -0.44
PHRF1-201ENST00000264555 DSCAML1Q8TD84 2053 aa12.27□□□□□ -0.44
PHRF1-201ENST00000264555 H3BQ85 93 aa12.27□□□□□ -0.44
PHRF1-201ENST00000264555 SORL1Q92673 2214 aa12.27□□□□□ -0.45
PHRF1-201ENST00000264555 MIFP14174 115 aa12.26□□□□□ -0.45
PHRF1-201ENST00000264555 PRRC2AP48634 2157 aaKnown RBP12.26□□□□□ -0.45
PHRF1-201ENST00000264555 PRM2P04554 102 aa12.26□□□□□ -0.45
PHRF1-201ENST00000264555 LINC00482Q8N8I6 264 aa12.26□□□□□ -0.45
PHRF1-201ENST00000264555 UBE2D4Q9Y2X8 147 aa12.26□□□□□ -0.45
PHRF1-201ENST00000264555 ETDCA0A1B0GVM5 59 aa12.25□□□□□ -0.45
PHRF1-201ENST00000264555 IGIPA6NJ69 53 aa12.25□□□□□ -0.45
PHRF1-201ENST00000264555 LINC00308Q8TCZ7 52 aa12.25□□□□□ -0.45
PHRF1-201ENST00000264555 MRPS36P82909 103 aaKnown RBP12.25□□□□□ -0.45
PHRF1-201ENST00000264555 CHCHD10Q8WYQ3 142 aaPredicted RBP12.24□□□□□ -0.45
PHRF1-201ENST00000264555 PKIGQ9Y2B9 76 aa12.24□□□□□ -0.45
PHRF1-201ENST00000264555 JMJD7-PLA2G4BH0Y9G9 81 aa12.24□□□□□ -0.45
PHRF1-201ENST00000264555 WFDC10AQ9H1F0 79 aa12.24□□□□□ -0.45
PHRF1-201ENST00000264555 UBE2BP63146 152 aa12.24□□□□□ -0.45
PHRF1-201ENST00000264555 DEFB105AQ8NG35 78 aa12.24□□□□□ -0.45
PHRF1-201ENST00000264555 C2CD3Q4AC94 2353 aa12.24□□□□□ -0.45
PHRF1-201ENST00000264555 IBA57-AS1B1ANH7 110 aa12.23□□□□□ -0.45
PHRF1-201ENST00000264555 PLA2G2AP14555 144 aa12.23□□□□□ -0.45
PHRF1-201ENST00000264555 C11orf45Q8TAV5 145 aa12.23□□□□□ -0.45
PHRF1-201ENST00000264555 ODF3L2Q3SX64 289 aa12.23□□□□□ -0.45
PHRF1-201ENST00000264555 PCSK5Q92824 1860 aa12.23□□□□□ -0.45
PHRF1-201ENST00000264555 TIMM17BO60830 172 aa12.23□□□□□ -0.45
PHRF1-201ENST00000264555 NDUFA7O95182 113 aa12.21□□□□□ -0.45
PHRF1-201ENST00000264555 UFSP1Q6NVU6 142 aa12.21□□□□□ -0.45
PHRF1-201ENST00000264555 DIRC1Q969H9 104 aa12.21□□□□□ -0.45
PHRF1-201ENST00000264555 PCNTO95613 3336 aa12.21□□□□□ -0.45
PHRF1-201ENST00000264555 ABCA2Q9BZC7 2435 aa12.21□□□□□ -0.46
PHRF1-201ENST00000264555 TRBV30A0A0K0K1B3 111 aa12.21□□□□□ -0.46
PHRF1-201ENST00000264555 A0A096LNJ9 63 aa12.2□□□□□ -0.46
PHRF1-201ENST00000264555 MYO18BQ8IUG5 2567 aa12.2□□□□□ -0.46
PHRF1-201ENST00000264555 TMEM256-PLSCR3K7ERE1 68 aa12.2□□□□□ -0.46
PHRF1-201ENST00000264555 BBC3Q96PG8 261 aaPredicted RBP12.2□□□□□ -0.46
PHRF1-201ENST00000264555 UBE2D1P51668 147 aa12.19□□□□□ -0.46
PHRF1-201ENST00000264555 TET2Q6N021 2002 aaPredicted RBP12.19□□□□□ -0.46
PHRF1-201ENST00000264555 A8MZ25 164 aa12.19□□□□□ -0.46
PHRF1-201ENST00000264555 KIR2DL5BQ8NHK3 375 aa12.19□□□□□ -0.46
PHRF1-201ENST00000264555 TRIAP1O43715 76 aa12.18□□□□□ -0.46
PHRF1-201ENST00000264555 UBE2D3P61077 147 aa12.18□□□□□ -0.46
PHRF1-201ENST00000264555 UBE2D2P62837 147 aa12.18□□□□□ -0.46
PHRF1-201ENST00000264555 RBX1P62877 108 aa12.18□□□□□ -0.46
PHRF1-201ENST00000264555 IGHV4-28A0A0C4DH34 117 aa12.18□□□□□ -0.46
PHRF1-201ENST00000264555 FUSP35637 526 aaKnown RBP eCLIP12.17□□□□□ -0.46
PHRF1-201ENST00000264555 SHISA2Q6UWI4 295 aa12.17□□□□□ -0.46
PHRF1-201ENST00000264555 TMEM258P61165 79 aa12.17□□□□□ -0.46
PHRF1-201ENST00000264555 SS18L2Q9UHA2 77 aa12.17□□□□□ -0.46
PHRF1-201ENST00000264555 IGLV2-18A0A075B6J9 118 aa12.17□□□□□ -0.46
PHRF1-201ENST00000264555 LOC100131303A0A0U1RQF7 123 aa12.17□□□□□ -0.46
PHRF1-201ENST00000264555 USP9XQ93008 2570 aaPredicted RBP12.16□□□□□ -0.46
PHRF1-201ENST00000264555 B5MCH6 92 aa12.16□□□□□ -0.46
PHRF1-201ENST00000264555 HIGD2BQ4VC39 106 aa12.16□□□□□ -0.46
PHRF1-201ENST00000264555 SPTBN4Q9H254 2564 aa12.16□□□□□ -0.46
PHRF1-201ENST00000264555 CHD8Q9HCK8 2581 aa12.15□□□□□ -0.46
PHRF1-201ENST00000264555 IGLV1-51P01701 117 aa12.15□□□□□ -0.46
PHRF1-201ENST00000264555 RBM3P98179 157 aaKnown RBP12.15□□□□□ -0.46
PHRF1-201ENST00000264555 DEFB131BA0A096LNP1 70 aa12.15□□□□□ -0.47
PHRF1-201ENST00000264555 CDC42SE2Q9NRR3 84 aa12.14□□□□□ -0.47
PHRF1-201ENST00000264555 IGLV4-69A0A075B6H9 119 aa12.14□□□□□ -0.47
PHRF1-201ENST00000264555 C16orf95Q9H693 158 aa12.14□□□□□ -0.47
PHRF1-201ENST00000264555 IGKV3D-7A0A0C4DH55 119 aa12.13□□□□□ -0.47
PHRF1-201ENST00000264555 TEX49A0A1B0GTD5 131 aa12.13□□□□□ -0.47
PHRF1-201ENST00000264555 CHD7Q9P2D1 2997 aa12.13□□□□□ -0.47
PHRF1-201ENST00000264555 COX7BP24311 80 aa12.13□□□□□ -0.47
PHRF1-201ENST00000264555 CD164L2Q6UWJ8 174 aa12.12□□□□□ -0.47
PHRF1-201ENST00000264555 LINC00959A0A1B0GUT2 108 aa12.12□□□□□ -0.47
PHRF1-201ENST00000264555 hADV29S1A0JD25 119 aa12.12□□□□□ -0.47
PHRF1-201ENST00000264555 USP9YO00507 2555 aaPredicted RBP12.12□□□□□ -0.47
PHRF1-201ENST00000264555 C1orf158Q8N1D5 194 aa12.12□□□□□ -0.47
PHRF1-201ENST00000264555 FAM236AA0A1B0GUQ0 79 aa12.11□□□□□ -0.47
PHRF1-201ENST00000264555 FAM236BA0A1B0GV22 79 aa12.11□□□□□ -0.47
PHRF1-201ENST00000264555 PDE6GP18545 87 aa12.11□□□□□ -0.47
PHRF1-201ENST00000264555 FAM110AQ9BQ89 295 aa12.11□□□□□ -0.47
PHRF1-201ENST00000264555 C14orf132Q9NPU4 83 aa12.11□□□□□ -0.47
PHRF1-201ENST00000264555 CHCHD7Q9BUK0 85 aa12.1□□□□□ -0.47
PHRF1-201ENST00000264555 LINC00643Q86TS7 51 aa12.1□□□□□ -0.47
PHRF1-201ENST00000264555 SPATA25Q9BR10 227 aa12.1□□□□□ -0.47
PHRF1-201ENST00000264555 KLK5Q9Y337 293 aaPredicted RBP12.1□□□□□ -0.47
PHRF1-201ENST00000264555 ATOX1O00244 68 aa12.1□□□□□ -0.47
PHRF1-201ENST00000264555 SMR3AQ99954 134 aa12.1□□□□□ -0.47
PHRF1-201ENST00000264555 HTTP42858 3142 aa12.1□□□□□ -0.47
PHRF1-201ENST00000264555 BEAN1Q3B7T3 259 aa12.09□□□□□ -0.47
PHRF1-201ENST00000264555 LINC00242Q5T6M2 205 aa12.09□□□□□ -0.47
PHRF1-201ENST00000264555 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.09□□□□□ -0.47
PHRF1-201ENST00000264555 LELP1Q5T871 98 aa12.09□□□□□ -0.47
PHRF1-201ENST00000264555 POM121L12Q8N7R1 296 aa12.08□□□□□ -0.48
PHRF1-201ENST00000264555 TLN2Q9Y4G6 2542 aa12.08□□□□□ -0.48
PHRF1-201ENST00000264555 NREPQ16612 68 aa12.08□□□□□ -0.48
PHRF1-201ENST00000264555 AMELXQ99217 191 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms