RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 DNAH2Q9P225 4427 aa12.45□□□□□ -0.42
CYSTM1-201ENST00000261811 LRCOL1A6NCL2 159 aa12.45□□□□□ -0.42
CYSTM1-201ENST00000261811 C14orf177Q52M58 125 aa12.45□□□□□ -0.42
CYSTM1-201ENST00000261811 ZNF664Q8N3J9 261 aa12.45□□□□□ -0.42
CYSTM1-201ENST00000261811 PRSS3P2Q8NHM4 247 aa12.45□□□□□ -0.42
CYSTM1-201ENST00000261811 UBE2D4Q9Y2X8 147 aa12.45□□□□□ -0.42
CYSTM1-201ENST00000261811 IGLV10-54A0A075B6I4 117 aa12.44□□□□□ -0.42
CYSTM1-201ENST00000261811 BAALCQ8WXS3 180 aa12.44□□□□□ -0.42
CYSTM1-201ENST00000261811 ALKBH7Q9BT30 221 aaPredicted RBP12.44□□□□□ -0.42
CYSTM1-201ENST00000261811 CDC42SE2Q9NRR3 84 aa12.44□□□□□ -0.42
CYSTM1-201ENST00000261811 SPANXA1Q9NS26 97 aa12.44□□□□□ -0.42
CYSTM1-201ENST00000261811 C16orf90A8MZG2 172 aa12.43□□□□□ -0.42
CYSTM1-201ENST00000261811 SS18Q15532 418 aa12.43□□□□□ -0.42
CYSTM1-201ENST00000261811 Q8N814 137 aa12.43□□□□□ -0.42
CYSTM1-201ENST00000261811 NTN5Q8WTR8 489 aaPredicted RBP12.43□□□□□ -0.42
CYSTM1-201ENST00000261811 CCL25O15444 150 aa12.42□□□□□ -0.42
CYSTM1-201ENST00000261811 IFI27P40305 119 aaPredicted RBP12.42□□□□□ -0.42
CYSTM1-201ENST00000261811 RPL39P62891 51 aaKnown RBP12.41□□□□□ -0.42
CYSTM1-201ENST00000261811 CBLN2Q8IUK8 224 aa12.41□□□□□ -0.42
CYSTM1-201ENST00000261811 CYSLTR1Q9Y271 337 aa12.41□□□□□ -0.42
CYSTM1-201ENST00000261811 DNAH17Q9UFH2 4485 aa12.41□□□□□ -0.42
CYSTM1-201ENST00000261811 LECT2O14960 151 aa12.4□□□□□ -0.42
CYSTM1-201ENST00000261811 MAPKAPK5-AS1Q8N8E1 139 aa12.4□□□□□ -0.42
CYSTM1-201ENST00000261811 LINC01549A6NIU2 74 aa12.39□□□□□ -0.43
CYSTM1-201ENST00000261811 KRTAP10-2P60368 255 aa12.39□□□□□ -0.43
CYSTM1-201ENST00000261811 FA2HQ7L5A8 372 aa12.39□□□□□ -0.43
CYSTM1-201ENST00000261811 CHCHD10Q8WYQ3 142 aaPredicted RBP12.39□□□□□ -0.43
CYSTM1-201ENST00000261811 PYGO1Q9Y3Y4 419 aa12.39□□□□□ -0.43
CYSTM1-201ENST00000261811 IGLV5-52A0A0A0MRZ9 124 aa12.38□□□□□ -0.43
CYSTM1-201ENST00000261811 LINC00959A0A1B0GUT2 108 aa12.38□□□□□ -0.43
CYSTM1-201ENST00000261811 C1orf196B1AJZ1 125 aa12.38□□□□□ -0.43
CYSTM1-201ENST00000261811 MRPS36P82909 103 aaKnown RBP12.38□□□□□ -0.43
CYSTM1-201ENST00000261811 CFAP161Q6P656 301 aa12.38□□□□□ -0.43
CYSTM1-201ENST00000261811 C2orf66Q6UXQ4 117 aa12.38□□□□□ -0.43
CYSTM1-201ENST00000261811 YPEL4Q96NS1 127 aa12.38□□□□□ -0.43
CYSTM1-201ENST00000261811 GAGE12HA6NDE8 117 aa12.37□□□□□ -0.43
CYSTM1-201ENST00000261811 USP17L23D6RBM5 183 aa12.37□□□□□ -0.43
CYSTM1-201ENST00000261811 KRTAP26-1Q6PEX3 210 aa12.37□□□□□ -0.43
CYSTM1-201ENST00000261811 Q6ZN92 141 aa12.37□□□□□ -0.43
CYSTM1-201ENST00000261811 NPSP0C0P6 89 aa12.36□□□□□ -0.43
CYSTM1-201ENST00000261811 RAB5BP61020 215 aa12.36□□□□□ -0.43
CYSTM1-201ENST00000261811 PAPPA-AS1Q5QFB9 102 aa12.36□□□□□ -0.43
CYSTM1-201ENST00000261811 Q6ZUT4 128 aa12.36□□□□□ -0.43
CYSTM1-201ENST00000261811 FAT2Q9NYQ8 4349 aa12.35□□□□□ -0.43
CYSTM1-201ENST00000261811 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.35□□□□□ -0.43
CYSTM1-201ENST00000261811 XCL1P47992 114 aa12.35□□□□□ -0.43
CYSTM1-201ENST00000261811 WFDC2Q14508 124 aa12.35□□□□□ -0.43
CYSTM1-201ENST00000261811 RNASE13Q5GAN3 156 aaKnown RBP12.35□□□□□ -0.43
CYSTM1-201ENST00000261811 TMEM141Q96I45 108 aa12.35□□□□□ -0.43
CYSTM1-201ENST00000261811 PKD1P98161 4303 aa12.34□□□□□ -0.43
CYSTM1-201ENST00000261811 HECTD4Q9Y4D8 3996 aa12.34□□□□□ -0.43
CYSTM1-201ENST00000261811 TRAV13-1A0A0B4J241 112 aa12.34□□□□□ -0.43
CYSTM1-201ENST00000261811 GCSHP23434 173 aa12.34□□□□□ -0.43
CYSTM1-201ENST00000261811 CD164L2Q6UWJ8 174 aa12.34□□□□□ -0.43
CYSTM1-201ENST00000261811 C2orf88Q9BSF0 95 aa12.34□□□□□ -0.43
CYSTM1-201ENST00000261811 AP5S1Q9NUS5 200 aa12.34□□□□□ -0.43
CYSTM1-201ENST00000261811 LINC01546A6NGU7 62 aa12.33□□□□□ -0.44
CYSTM1-201ENST00000261811 IFITM10A6NMD0 228 aa12.33□□□□□ -0.44
CYSTM1-201ENST00000261811 TEX43Q6ZNM6 134 aa12.33□□□□□ -0.44
CYSTM1-201ENST00000261811 C18orf32Q8TCD1 76 aa12.33□□□□□ -0.44
CYSTM1-201ENST00000261811 LINC00614P0C842 121 aa12.32□□□□□ -0.44
CYSTM1-201ENST00000261811 TOMM6Q96B49 74 aa12.32□□□□□ -0.44
CYSTM1-201ENST00000261811 VCX2Q9H322 139 aa12.32□□□□□ -0.44
CYSTM1-201ENST00000261811 IGLV4-3A0A075B6K6 122 aa12.31□□□□□ -0.44
CYSTM1-201ENST00000261811 hDV102S1A0JD36 115 aa12.31□□□□□ -0.44
CYSTM1-201ENST00000261811 FOXI1Q12951 378 aa12.31□□□□□ -0.44
CYSTM1-201ENST00000261811 SCGB3A1Q96QR1 104 aa12.31□□□□□ -0.44
CYSTM1-201ENST00000261811 OPRPNQ99935 248 aaPredicted RBP12.31□□□□□ -0.44
CYSTM1-201ENST00000261811 MALP21145 153 aa12.3□□□□□ -0.44
CYSTM1-201ENST00000261811 ERASQ7Z444 233 aa12.3□□□□□ -0.44
CYSTM1-201ENST00000261811 TIMM17AQ99595 171 aa12.3□□□□□ -0.44
CYSTM1-201ENST00000261811 COX7A2LO14548 114 aa12.29□□□□□ -0.44
CYSTM1-201ENST00000261811 FUSP35637 526 aaKnown RBP eCLIP12.29□□□□□ -0.44
CYSTM1-201ENST00000261811 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.28□□□□□ -0.44
CYSTM1-201ENST00000261811 IGHV1-58A0A0C4DH39 117 aa12.28□□□□□ -0.44
CYSTM1-201ENST00000261811 IGIPA6NJ69 53 aa12.28□□□□□ -0.44
CYSTM1-201ENST00000261811 APOMO95445 188 aa12.28□□□□□ -0.44
CYSTM1-201ENST00000261811 PRSS1P07477 247 aa12.28□□□□□ -0.44
CYSTM1-201ENST00000261811 TRGC2P03986 189 aa12.27□□□□□ -0.45
CYSTM1-201ENST00000261811 COLCA2A8K830 154 aa12.26□□□□□ -0.45
CYSTM1-201ENST00000261811 FAM104AQ969W3 186 aa12.26□□□□□ -0.45
CYSTM1-201ENST00000261811 S100A1P23297 94 aa12.25□□□□□ -0.45
CYSTM1-201ENST00000261811 SEC11AP67812 179 aa12.25□□□□□ -0.45
CYSTM1-201ENST00000261811 CHCHD1Q96BP2 118 aaKnown RBP12.25□□□□□ -0.45
CYSTM1-201ENST00000261811 AMELXQ99217 191 aa12.25□□□□□ -0.45
CYSTM1-201ENST00000261811 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.24□□□□□ -0.45
CYSTM1-201ENST00000261811 CDK2AP2O75956 126 aa12.24□□□□□ -0.45
CYSTM1-201ENST00000261811 HBDP02042 147 aa12.24□□□□□ -0.45
CYSTM1-201ENST00000261811 BAGE3Q86Y29 109 aa12.24□□□□□ -0.45
CYSTM1-201ENST00000261811 C15orf56Q8N910 161 aa12.24□□□□□ -0.45
CYSTM1-201ENST00000261811 GVQW2A0A096LPI5 108 aaPredicted RBP12.23□□□□□ -0.45
CYSTM1-201ENST00000261811 ZNF561-AS1K7EIQ3 104 aa12.23□□□□□ -0.45
CYSTM1-201ENST00000261811 PKHD1P08F94 4074 aa12.23□□□□□ -0.45
CYSTM1-201ENST00000261811 SCO1O75880 301 aa12.22□□□□□ -0.45
CYSTM1-201ENST00000261811 UBE2D1P51668 147 aa12.22□□□□□ -0.45
CYSTM1-201ENST00000261811 CNBPP62633 177 aaKnown RBP12.22□□□□□ -0.45
CYSTM1-201ENST00000261811 HIGD2BQ4VC39 106 aa12.22□□□□□ -0.45
CYSTM1-201ENST00000261811 C5orf38Q86SI9 138 aa12.22□□□□□ -0.45
CYSTM1-201ENST00000261811 KRTAP10-1P60331 282 aa12.21□□□□□ -0.45
CYSTM1-201ENST00000261811 IGHV3OR16-9A0A0B4J2B5 98 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms