RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 BPESC1Q9GZL8 116 aa3.09□□□□□ -1.92
UBE4A-201ENST00000252108 LINC00527Q9UJ94 153 aa3.09□□□□□ -1.92
UBE4A-201ENST00000252108 IGLV4-3A0A075B6K6 122 aa3.08□□□□□ -1.92
UBE4A-201ENST00000252108 J3KT08 172 aa3.08□□□□□ -1.92
UBE4A-201ENST00000252108 ATP5EP2Q5VTU8 51 aa3.08□□□□□ -1.92
UBE4A-201ENST00000252108 A6NDX4 124 aa3.08□□□□□ -1.92
UBE4A-201ENST00000252108 CRLF1O75462 422 aa3.08□□□□□ -1.92
UBE4A-201ENST00000252108 UBE2AP49459 152 aa3.08□□□□□ -1.92
UBE4A-201ENST00000252108 DAZ2Q13117 558 aaKnown RBP3.08□□□□□ -1.92
UBE4A-201ENST00000252108 DAZ4Q86SG3 579 aaKnown RBP3.08□□□□□ -1.92
UBE4A-201ENST00000252108 FAM110AQ9BQ89 295 aa3.08□□□□□ -1.92
UBE4A-201ENST00000252108 DAZ3Q9NR90 486 aaKnown RBP3.08□□□□□ -1.92
UBE4A-201ENST00000252108 IGHV3-64A0A075B6Q5 118 aa3.08□□□□□ -1.92
UBE4A-201ENST00000252108 VSIG2Q96IQ7 327 aa3.08□□□□□ -1.92
UBE4A-201ENST00000252108 ICE1Q9Y2F5 2266 aa3.08□□□□□ -1.92
UBE4A-201ENST00000252108 RPL39P62891 51 aaKnown RBP3.08□□□□□ -1.92
UBE4A-201ENST00000252108 GAGE2AQ6NT46 116 aa3.08□□□□□ -1.92
UBE4A-201ENST00000252108 LINC01548A6NM66 108 aa3.08□□□□□ -1.92
UBE4A-201ENST00000252108 IGLV1-40P01703 118 aa3.08□□□□□ -1.92
UBE4A-201ENST00000252108 CNOT1A5YKK6 2376 aaKnown RBP3.08□□□□□ -1.92
UBE4A-201ENST00000252108 IGF2RP11717 2491 aa3.08□□□□□ -1.92
UBE4A-201ENST00000252108 CACNA1BQ00975 2339 aa3.08□□□□□ -1.92
UBE4A-201ENST00000252108 USP9XQ93008 2570 aaPredicted RBP3.07□□□□□ -1.92
UBE4A-201ENST00000252108 TRAV25A0A0B4J276 109 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 TRBV7-7A0A0K0K1E9 115 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 LY6HO94772 140 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 GAS8-AS1O95177 125 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 BAALC-AS2P0C853 105 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 LINC00315P59091 139 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 TMEM61Q8N0U2 210 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 C20orf173Q96LM9 149 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 MUC4Q99102 2169 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 ANK2Q01484 3957 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 TRAV4A0A0B4J268 109 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 K7EQG2 157 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 PIEZO1Q92508 2521 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 ABCA4P78363 2273 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 USP24Q9UPU5 2620 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 TRIAP1O43715 76 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 TSHBP01222 138 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 SPINK13Q1W4C9 94 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 FAM104AQ969W3 186 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 LINC00467Q9BRT7 94 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 TMEM243Q9BU79 118 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 KIF25-AS1Q9Y6Z4 181 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 APCP25054 2843 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 JMJD7-PLA2G4BH0Y9G9 81 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 SS18Q15532 418 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 AMELXQ99217 191 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 A0A1B0GX51 115 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 INSL3P51460 131 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 C3orf22Q8N5N4 141 aa3.07□□□□□ -1.92
UBE4A-201ENST00000252108 RPL18AQ02543 176 aaKnown RBP3.06□□□□□ -1.92
UBE4A-201ENST00000252108 PRR9Q5T870 116 aa3.06□□□□□ -1.92
UBE4A-201ENST00000252108 LRRC75A-AS1Q8N1F1 130 aa3.06□□□□□ -1.92
UBE4A-201ENST00000252108 PRB4P10163 310 aaPredicted RBP3.06□□□□□ -1.92
UBE4A-201ENST00000252108 LINC00337Q8N6G1 96 aa3.06□□□□□ -1.92
UBE4A-201ENST00000252108 PKD1L2Q7Z442 2459 aa3.06□□□□□ -1.92
UBE4A-201ENST00000252108 SMCPP49901 116 aaPredicted RBP3.06□□□□□ -1.92
UBE4A-201ENST00000252108 C14orf177Q52M58 125 aa3.06□□□□□ -1.92
UBE4A-201ENST00000252108 KRTAP1-3Q8IUG1 177 aa3.06□□□□□ -1.92
UBE4A-201ENST00000252108 ZNF843Q8N446 348 aa3.06□□□□□ -1.92
UBE4A-201ENST00000252108 ZNRF2Q8NHG8 242 aa3.06□□□□□ -1.92
UBE4A-201ENST00000252108 Q9H8V8 135 aa3.06□□□□□ -1.92
UBE4A-201ENST00000252108 NIPBLQ6KC79 2804 aaeCLIP3.06□□□□□ -1.92
UBE4A-201ENST00000252108 DOPEY1Q5JWR5 2465 aa3.06□□□□□ -1.92
UBE4A-201ENST00000252108 ACACAQ13085 2346 aa3.06□□□□□ -1.92
UBE4A-201ENST00000252108 PRRC2AP48634 2157 aaKnown RBP3.06□□□□□ -1.92
UBE4A-201ENST00000252108 NACAE9PAV3 2078 aa3.06□□□□□ -1.92
UBE4A-201ENST00000252108 FAM236AA0A1B0GUQ0 79 aa3.06□□□□□ -1.92
UBE4A-201ENST00000252108 FAM236BA0A1B0GV22 79 aa3.06□□□□□ -1.92
UBE4A-201ENST00000252108 CRYGDP07320 174 aa3.06□□□□□ -1.92
UBE4A-201ENST00000252108 LINC00158P58513 81 aa3.06□□□□□ -1.92
UBE4A-201ENST00000252108 HIST2H2BCQ6DN03 193 aa3.06□□□□□ -1.92
UBE4A-201ENST00000252108 HIST2H2BDQ6DRA6 164 aa3.06□□□□□ -1.92
UBE4A-201ENST00000252108 DEFB131AP59861 70 aa3.06□□□□□ -1.92
UBE4A-201ENST00000252108 UNQ9165/PRO28630Q6UXU0 137 aa3.06□□□□□ -1.92
UBE4A-201ENST00000252108 ATRXP46100 2492 aa3.06□□□□□ -1.92
UBE4A-201ENST00000252108 PDE6GP18545 87 aa3.05□□□□□ -1.92
UBE4A-201ENST00000252108 A0A096LPF7 62 aa3.05□□□□□ -1.92
UBE4A-201ENST00000252108 LY6G6DO95868 133 aa3.05□□□□□ -1.92
UBE4A-201ENST00000252108 Q6ZQT7 251 aa3.05□□□□□ -1.92
UBE4A-201ENST00000252108 MUC7Q8TAX7 377 aa3.05□□□□□ -1.92
UBE4A-201ENST00000252108 UBL5Q9BZL1 73 aa3.05□□□□□ -1.92
UBE4A-201ENST00000252108 CSDC2Q9Y534 153 aaKnown RBP3.05□□□□□ -1.92
UBE4A-201ENST00000252108 PKDREJQ9NTG1 2253 aa3.05□□□□□ -1.92
UBE4A-201ENST00000252108 SYNJ2BPP57105 145 aa3.05□□□□□ -1.92
UBE4A-201ENST00000252108 Q6ZS46 218 aa3.05□□□□□ -1.92
UBE4A-201ENST00000252108 C11orf45Q8TAV5 145 aa3.05□□□□□ -1.92
UBE4A-201ENST00000252108 LINC00308Q8TCZ7 52 aa3.05□□□□□ -1.92
UBE4A-201ENST00000252108 ORMDL1Q9P0S3 153 aa3.05□□□□□ -1.92
UBE4A-201ENST00000252108 TEX49A0A1B0GTD5 131 aa3.05□□□□□ -1.92
UBE4A-201ENST00000252108 hADV29S1A0JD25 119 aa3.05□□□□□ -1.92
UBE4A-201ENST00000252108 TMEM258P61165 79 aa3.05□□□□□ -1.92
UBE4A-201ENST00000252108 C10orf105Q8TEF2 133 aa3.05□□□□□ -1.92
UBE4A-201ENST00000252108 RS1O15537 224 aa3.05□□□□□ -1.92
UBE4A-201ENST00000252108 DCANP1Q8TF63 244 aa3.05□□□□□ -1.92
UBE4A-201ENST00000252108 ABCA1O95477 2261 aa3.04□□□□□ -1.92
UBE4A-201ENST00000252108 FAM229AH3BQW9 127 aa3.04□□□□□ -1.92
UBE4A-201ENST00000252108 SPART-AS1P0CW21 52 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms