RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 A4D1N5 150 aa18.03■□□□□ 0.48
RUNDC3A-201ENST00000225441 IGHV3-30-3P0DP02 117 aa18.03■□□□□ 0.48
RUNDC3A-201ENST00000225441 SMCPP49901 116 aaPredicted RBP18.03■□□□□ 0.48
RUNDC3A-201ENST00000225441 TMEM263Q8WUH6 116 aaKnown RBP18.03■□□□□ 0.48
RUNDC3A-201ENST00000225441 HTN1P15515 57 aa18.02■□□□□ 0.48
RUNDC3A-201ENST00000225441 UBE2D4Q9Y2X8 147 aa18.02■□□□□ 0.48
RUNDC3A-201ENST00000225441 IGHV3-33P01772 117 aa18.02■□□□□ 0.47
RUNDC3A-201ENST00000225441 KRTAP24-1Q3LI83 254 aa18.02■□□□□ 0.47
RUNDC3A-201ENST00000225441 RNF183Q96D59 192 aa18.02■□□□□ 0.47
RUNDC3A-201ENST00000225441 ERG28Q9UKR5 140 aa18.02■□□□□ 0.47
RUNDC3A-201ENST00000225441 TCL1BO95988 128 aa18.01■□□□□ 0.47
RUNDC3A-201ENST00000225441 IGHV3-73A0A0B4J1V6 119 aa18■□□□□ 0.47
RUNDC3A-201ENST00000225441 MUSTN1Q8IVN3 82 aa18■□□□□ 0.47
RUNDC3A-201ENST00000225441 SPANXDQ9BXN6 97 aa18■□□□□ 0.47
RUNDC3A-201ENST00000225441 SPANXCQ9NY87 97 aa18■□□□□ 0.47
RUNDC3A-201ENST00000225441 SCGB1C2P0DMR2 95 aa18■□□□□ 0.47
RUNDC3A-201ENST00000225441 TEN1Q86WV5 123 aa18■□□□□ 0.47
RUNDC3A-201ENST00000225441 PRIMA1Q86XR5 153 aa18■□□□□ 0.47
RUNDC3A-201ENST00000225441 PPDPFLQ8WWR9 84 aa18■□□□□ 0.47
RUNDC3A-201ENST00000225441 CITED1Q99966 193 aa18■□□□□ 0.47
RUNDC3A-201ENST00000225441 AZU1P20160 251 aa17.98■□□□□ 0.47
RUNDC3A-201ENST00000225441 TIMM17BO60830 172 aa17.98■□□□□ 0.47
RUNDC3A-201ENST00000225441 TIRAPP58753 221 aa17.98■□□□□ 0.47
RUNDC3A-201ENST00000225441 VSIG2Q96IQ7 327 aa17.98■□□□□ 0.47
RUNDC3A-201ENST00000225441 Q6ZSN1 163 aa17.97■□□□□ 0.47
RUNDC3A-201ENST00000225441 MTURNQ8N3F0 131 aa17.97■□□□□ 0.47
RUNDC3A-201ENST00000225441 LINC01600Q96MT4 127 aa17.96■□□□□ 0.47
RUNDC3A-201ENST00000225441 CMC4P56277 68 aaPredicted RBP17.95■□□□□ 0.46
RUNDC3A-201ENST00000225441 LITAFQ99732 161 aa17.95■□□□□ 0.46
RUNDC3A-201ENST00000225441 NDUFA12Q9UI09 145 aa17.95■□□□□ 0.46
RUNDC3A-201ENST00000225441 IGHV3-64A0A075B6Q5 118 aa17.94■□□□□ 0.46
RUNDC3A-201ENST00000225441 IGLV5-45A0A087WSX0 123 aa17.94■□□□□ 0.46
RUNDC3A-201ENST00000225441 PF4P02776 101 aa17.93■□□□□ 0.46
RUNDC3A-201ENST00000225441 IL17DQ8TAD2 202 aa17.93■□□□□ 0.46
RUNDC3A-201ENST00000225441 GTSF1LQ9H1H1 148 aa17.93■□□□□ 0.46
RUNDC3A-201ENST00000225441 TRBV30A0A0K0K1B3 111 aa17.93■□□□□ 0.46
RUNDC3A-201ENST00000225441 SMAGPQ0VAQ4 97 aa17.93■□□□□ 0.46
RUNDC3A-201ENST00000225441 ZFAND6Q6FIF0 208 aa17.93■□□□□ 0.46
RUNDC3A-201ENST00000225441 GEMIN7Q9H840 131 aaKnown RBP17.93■□□□□ 0.46
RUNDC3A-201ENST00000225441 TRBV10-1A0A0K0K1A3 114 aa17.92■□□□□ 0.46
RUNDC3A-201ENST00000225441 IFITM1P13164 125 aa17.92■□□□□ 0.46
RUNDC3A-201ENST00000225441 NACAE9PAV3 2078 aa17.91■□□□□ 0.46
RUNDC3A-201ENST00000225441 EIF4EBP3O60516 100 aaPredicted RBP17.91■□□□□ 0.46
RUNDC3A-201ENST00000225441 INSL3P51460 131 aa17.91■□□□□ 0.46
RUNDC3A-201ENST00000225441 SFTA2Q6UW10 78 aa17.91■□□□□ 0.46
RUNDC3A-201ENST00000225441 FAM19A3Q7Z5A8 133 aa17.91■□□□□ 0.46
RUNDC3A-201ENST00000225441 STHQ8IWL8 128 aa17.91■□□□□ 0.46
RUNDC3A-201ENST00000225441 MIAQ16674 131 aa17.91■□□□□ 0.46
RUNDC3A-201ENST00000225441 LINC00482Q8N8I6 264 aa17.91■□□□□ 0.46
RUNDC3A-201ENST00000225441 CEMP1Q6PRD7 247 aaPredicted RBP17.9■□□□□ 0.46
RUNDC3A-201ENST00000225441 CSDC2Q9Y534 153 aaKnown RBP17.9■□□□□ 0.46
RUNDC3A-201ENST00000225441 TENM1Q9UKZ4 2725 aa17.89■□□□□ 0.46
RUNDC3A-201ENST00000225441 ATXN8Q156A1 80 aa17.89■□□□□ 0.45
RUNDC3A-201ENST00000225441 ODF3L2Q3SX64 289 aa17.89■□□□□ 0.45
RUNDC3A-201ENST00000225441 Q6ZUT4 128 aa17.89■□□□□ 0.45
RUNDC3A-201ENST00000225441 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.88■□□□□ 0.45
RUNDC3A-201ENST00000225441 TRAV8-3A0A0A6YYJ7 113 aa17.88■□□□□ 0.45
RUNDC3A-201ENST00000225441 IGKV2-29A2NJV5 120 aaPredicted RBP17.88■□□□□ 0.45
RUNDC3A-201ENST00000225441 ATRQ13535 2644 aa17.87■□□□□ 0.45
RUNDC3A-201ENST00000225441 PRM2P04554 102 aa17.87■□□□□ 0.45
RUNDC3A-201ENST00000225441 DGAT2L7PQ6IED9 249 aa17.87■□□□□ 0.45
RUNDC3A-201ENST00000225441 SLC25A20O43772 301 aa17.86■□□□□ 0.45
RUNDC3A-201ENST00000225441 Q9UF83 564 aa17.86■□□□□ 0.45
RUNDC3A-201ENST00000225441 SORL1Q92673 2214 aa17.86■□□□□ 0.45
RUNDC3A-201ENST00000225441 TMEM262E9PQX1 116 aa17.86■□□□□ 0.45
RUNDC3A-201ENST00000225441 NDUFA1O15239 70 aa17.86■□□□□ 0.45
RUNDC3A-201ENST00000225441 HERVK_113P63121 156 aa17.86■□□□□ 0.45
RUNDC3A-201ENST00000225441 DAZ2Q13117 558 aaKnown RBP17.86■□□□□ 0.45
RUNDC3A-201ENST00000225441 DAZ4Q86SG3 579 aaKnown RBP17.86■□□□□ 0.45
RUNDC3A-201ENST00000225441 C1orf158Q8N1D5 194 aa17.86■□□□□ 0.45
RUNDC3A-201ENST00000225441 CARD19Q96LW7 228 aa17.86■□□□□ 0.45
RUNDC3A-201ENST00000225441 DAZ3Q9NR90 486 aaKnown RBP17.86■□□□□ 0.45
RUNDC3A-201ENST00000225441 WNK1Q9H4A3 2382 aa17.85■□□□□ 0.45
RUNDC3A-201ENST00000225441 CIDEAO60543 219 aa17.84■□□□□ 0.45
RUNDC3A-201ENST00000225441 RPL36AP83881 106 aaKnown RBP17.84■□□□□ 0.45
RUNDC3A-201ENST00000225441 Q1RN00 199 aa17.84■□□□□ 0.45
RUNDC3A-201ENST00000225441 RPL36ALQ969Q0 106 aaKnown RBP17.84■□□□□ 0.45
RUNDC3A-201ENST00000225441 XCL2Q9UBD3 114 aa17.84■□□□□ 0.45
RUNDC3A-201ENST00000225441 SPINK8P0C7L1 97 aa17.84■□□□□ 0.45
RUNDC3A-201ENST00000225441 COPS9Q8WXC6 57 aa17.84■□□□□ 0.45
RUNDC3A-201ENST00000225441 CDIP1Q9H305 208 aa17.84■□□□□ 0.45
RUNDC3A-201ENST00000225441 TRAV4A0A0B4J268 109 aa17.83■□□□□ 0.44
RUNDC3A-201ENST00000225441 PRSS2P07478 247 aa17.83■□□□□ 0.44
RUNDC3A-201ENST00000225441 CIRBPQ14011 172 aaKnown RBP17.83■□□□□ 0.44
RUNDC3A-201ENST00000225441 FAM110AQ9BQ89 295 aa17.83■□□□□ 0.44
RUNDC3A-201ENST00000225441 IGLV1-51P01701 117 aa17.82■□□□□ 0.44
RUNDC3A-201ENST00000225441 RNASE13Q5GAN3 156 aaKnown RBP17.82■□□□□ 0.44
RUNDC3A-201ENST00000225441 ANKRD29Q8N6D5 301 aa17.82■□□□□ 0.44
RUNDC3A-201ENST00000225441 IGLV5-39A0A0G2JS06 123 aa17.82■□□□□ 0.44
RUNDC3A-201ENST00000225441 COX6CP09669 75 aa17.82■□□□□ 0.44
RUNDC3A-201ENST00000225441 ADAMTSL4-AS1Q5T5F5 129 aa17.82■□□□□ 0.44
RUNDC3A-201ENST00000225441 FBN1P35555 2871 aaKnown RBP17.81■□□□□ 0.44
RUNDC3A-201ENST00000225441 IGHV3-38A0A0C4DH36 116 aa17.81■□□□□ 0.44
RUNDC3A-201ENST00000225441 C9JAW5 83 aa17.81■□□□□ 0.44
RUNDC3A-201ENST00000225441 K7EQD1 137 aa17.81■□□□□ 0.44
RUNDC3A-201ENST00000225441 LINC01620Q4KN68 170 aa17.8■□□□□ 0.44
RUNDC3A-201ENST00000225441 C3orf56Q8N813 242 aa17.8■□□□□ 0.44
RUNDC3A-201ENST00000225441 CDKN2A-AS1Q9UH64 79 aa17.8■□□□□ 0.44
RUNDC3A-201ENST00000225441 TRGV1A0A0A0MS02 117 aa17.79■□□□□ 0.44
RUNDC3A-201ENST00000225441 PPDPFQ9H3Y8 114 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms