RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 2200002J24RikQ9D807 110 aa13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Ighv9-3A0A0B4J1J5 117 aa13.36□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Rpl36-ps4A0A140T8U4 117 aa13.36□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Psmg4P0C7N9 123 aa13.36□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Loxl2P58022 776 aa13.36□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Trav4-2A0A075B638 110 aa13.36□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Dkk1O54908 272 aa13.36□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Defa20Q45VN2 95 aa13.36□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Olfr477Q8VGI6 310 aa13.36□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Trav6d-5A0A075B6B9 112 aa13.36□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Iglv3A0A0B4J1K5 122 aa13.36□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Znf329Q6GQR8 522 aa13.36□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Pf4Q9Z126 105 aa13.36□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Ighv5-16A0A0B4J1P4 117 aa13.36□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Gm11444F6QMA6 170 aa13.36□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Zfp119aQ9JIC0 545 aa13.36□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Gm21983D6RFS9 131 aa13.35□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Olfr523Q8VFE7 317 aa13.35□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Mrpl27Q99N92 148 aa13.35□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Gm45861A0A1B0GRY3 1923 aa13.35□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Cited2O35740 269 aa13.35□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Atp5g2P56383 146 aa13.35□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Snrpd3P62320 126 aaKnown RBP13.35□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Adra2aQ01338 450 aa13.35□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Fbln7Q501P1 440 aa13.35□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Tmem177Q8BPE4 311 aa13.35□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Poc1aQ8JZX3 405 aa13.35□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Mrps36Q9CQX8 102 aa13.35□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Ank3G5E8K5 1961 aa13.35□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Igkv9-123A0A140T8N8 117 aa13.35□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Gm36368A0A1D5RLK8 91 aa13.35□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Adrb3P25962 400 aa13.35□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Dlx6P70397 175 aa13.35□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Foxs1Q61574 329 aa13.35□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Fam19a2Q7TPG7 131 aa13.35□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 SostQ99P68 211 aa13.35□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Hdgfl3Q9JMG7 202 aa13.35□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Atg2aQ6P4T0 1914 aa13.35□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Gm21616B6ZB74 166 aa13.35□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Tmem100Q9CQG9 134 aa13.35□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Tnfsf11O35235 316 aa13.34□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 EtdQ80SW5 59 aa13.34□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Lime1Q9EQR5 269 aa13.34□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Gm35549A0A0N4SUS7 141 aa13.34□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Gm4881A0A140LIR9 352 aa13.34□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Olfr1337A2ACY8 315 aa13.34□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Vamp8O70404 101 aa13.34□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 P01723 117 aa13.34□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 IcosQ9WVS0 200 aa13.34□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Tm4sf20Q9CQY8 226 aa13.34□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Gm20825J3QM67 227 aa13.34□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Ssty2Q149W4 227 aa13.34□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 G6pc2Q9Z186 355 aa13.34□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Kif26bQ7TNC6 2112 aa13.34□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Trav16nA0A075B634 117 aa13.34□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Defa-rs2P17534 91 aa13.34□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Vmn1r70Q8R254 298 aa13.34□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Uqcrfs1Q9CR68 274 aa13.34□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Wbp2nlQ9D529 359 aa13.34□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 CfdP03953 259 aa13.33□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Olfr1209Q3SXJ3 310 aa13.33□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Hist3h2bbQ8CGP0 126 aa13.33□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Hist3h2baQ9D2U9 126 aa13.33□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Opn3Q9WUK7 400 aa13.33□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Elovl5Q8BHI7 299 aa13.33□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Tmem129Q8K304 362 aa13.33□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Plxnd1Q3UH93 1925 aa13.33□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Gm20458E9PXJ7 78 aa13.33□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Mmp23O88676 391 aa13.32□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Zfp407G3UVV3 2246 aa13.32□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 SeleQ00690 612 aa13.32□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Iglc3P01845 104 aa13.32□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 RetnQ99P87 114 aa13.32□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Gm10842Q3U587 122 aa13.32□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Dtx1Q61010 627 aa13.31□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Gpx7Q99LJ6 186 aa13.31□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Tcf20Q9EPQ8 1987 aa13.31□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Gm20219A0A1B0GRQ3 87 aa13.31□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Tmem241Q3UME2 297 aa13.31□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Trav6n-5A0A075B621 112 aa13.31□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Trav6-5A0A075B6B5 112 aa13.31□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Tmprss12Q3V0Q7 336 aa13.31□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Phlda3Q9WV95 125 aa13.31□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 A0A1L1SR50 188 aa13.31□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Foxg1Q60987 481 aa13.31□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Gm1553Q66VB7 94 aa13.31□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Hcfc2Q9D968 241 aa13.31□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 A0A1Y7VMQ4 148 aa13.3□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Gm43517E9PYS1 339 aa13.3□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 TcraP01849 138 aa13.3□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 PpyP10601 100 aa13.3□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Dynlt3P56387 116 aa13.3□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 UngP97931 306 aa13.3□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Tmem40Q4FJU9 225 aa13.3□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Olfr975Q8VG91 310 aa13.3□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Rnase6Q9D244 153 aa13.3□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Znf319Q9ERR8 581 aa13.3□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 GchfrP99025 84 aa13.3□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 KncnQ307W7 124 aa13.3□□□□□ -0.28
Pcdh1-203ENSMUST00000160721 Ss18l1Q8BW22 402 aa13.3□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 56.8 ms