RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Hcfc2Q9D968 241 aa13.12□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Scrt1Q99M85 348 aa13.11□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Gm10912Q3UXH0 145 aa13.11□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Repin1Q5U4E2 545 aa13.11□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Samd10Q7TST3 202 aa13.11□□□□□ -0.31
Clcn3-203ENSMUST00000093490 CompQ9R0G6 755 aa13.11□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Gbf1Q6DFZ1 1861 aa13.11□□□□□ -0.31
Clcn3-203ENSMUST00000093490 4931422A03RikA2BHN9 113 aa13.11□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Olfr779E9PUS9 130 aa13.11□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Folr2Q05685 251 aa13.11□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Fgf5P15656 264 aa13.11□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Gm10842Q3U587 122 aa13.11□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Khdc1cQ4KL78 166 aa13.11□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Fbln5Q9WVH9 448 aa13.11□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Mcm3apQ9WUU9 1971 aa13.1□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Trav16nA0A075B634 117 aa13.1□□□□□ -0.31
Clcn3-203ENSMUST00000093490 PlnP61014 52 aa13.1□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Iah1Q9DB29 249 aa13.1□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Wipf3P0C7L0 485 aa13.1□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Zfp36P22893 319 aaKnown RBP13.1□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Cphx2Q8BX39 182 aa13.1□□□□□ -0.31
Clcn3-203ENSMUST00000093490 RetnlgQ8K426 117 aa13.1□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Olfr523Q8VFE7 317 aa13.1□□□□□ -0.31
Clcn3-203ENSMUST00000093490 HrkP62816 92 aa13.1□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Wdr83osQ6ZWX0 106 aa13.1□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Q8CF25 301 aa13.1□□□□□ -0.31
Clcn3-203ENSMUST00000093490 NgfP01139 241 aa13.1□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Tmem95P0DJF3 176 aa13.1□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Gm4792Q569Q2 183 aa13.1□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Trbv17A0A140T8P8 114 aa13.09□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Tmprss12Q3V0Q7 336 aa13.09□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Olfr1419Q7TQS2 343 aa13.09□□□□□ -0.31
Clcn3-203ENSMUST00000093490 H2al3Q9D4U4 128 aa13.09□□□□□ -0.31
Clcn3-203ENSMUST00000093490 GlmpQ9JHJ3 404 aa13.09□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Bdp1Q571C7 2467 aa13.09□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Olfr235E9Q9Z6 312 aa13.09□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Gm20854Q62461 227 aa13.09□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Pcdh15Q99PJ1 1943 aa13.09□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Amn1B8JKV0 258 aa13.09□□□□□ -0.31
Clcn3-203ENSMUST00000093490 GchfrP99025 84 aa13.09□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Q3UNZ8 350 aa13.09□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Lrcol1Q3URS3 161 aa13.09□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Rnf138Q9CQE0 245 aaKnown RBP13.09□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Slc25a15Q9WVD5 301 aa13.09□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Siglec15A7E1W8 342 aa13.09□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Zfp648D3Z0W3 525 aa13.09□□□□□ -0.31
Clcn3-203ENSMUST00000093490 P04946 108 aa13.09□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Rbfox3Q8BIF2 374 aa13.09□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Gm21983D6RFS9 131 aa13.08□□□□□ -0.31
Clcn3-203ENSMUST00000093490 P01801 115 aa13.08□□□□□ -0.31
Clcn3-203ENSMUST00000093490 RetnQ99P87 114 aa13.08□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Zfp983E9PUT0 460 aa13.08□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Olfr491Q8VG06 310 aa13.08□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Cdkn1aP39689 159 aa13.08□□□□□ -0.32
Clcn3-203ENSMUST00000093490 D130052B06RikQ3UW13 202 aa13.08□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Vmn1r70Q8R254 298 aa13.08□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Gm20458E9PXJ7 78 aa13.08□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Foxs1Q61574 329 aa13.08□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Tmem100Q9CQG9 134 aa13.08□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Prss22Q9ER10 306 aa13.08□□□□□ -0.32
Clcn3-203ENSMUST00000093490 ThadaA8C756 1938 aa13.08□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Vmn1r1E9PVR6 306 aa13.08□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Efnb3O35393 340 aa13.08□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Wisp1O54775 367 aa13.08□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Supt4h1aP63271 117 aa13.08□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Znf474Q6V5K9 347 aa13.08□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Iglv3A0A0B4J1K5 122 aa13.07□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Pax9P47242 342 aa13.07□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Olfr761Q7TRJ0 323 aa13.07□□□□□ -0.32
Clcn3-203ENSMUST00000093490 GalmQ8K157 342 aa13.07□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Vamp8O70404 101 aa13.07□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Prdm6Q3UZD5 596 aa13.07□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Trav7n-4A0A075B620 113 aa13.07□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Gm17660B9UIU9 90 aa13.07□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Gsx1P31315 261 aa13.07□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Trav6d-3A0A075B6B3 112 aa13.07□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Rnf5O35445 180 aa13.07□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Trav6-3Q5R1E6 112 aa13.07□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Znf319Q9ERR8 581 aa13.07□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Wdr31Q9JHB4 367 aa13.07□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Timp3P39876 211 aa13.06□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Cacng7P62956 275 aa13.06□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Ralgapa1Q6GYP7 2035 aa13.06□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Morn2Q6UL01 79 aa13.06□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Rnf126Q91YL2 313 aa13.06□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Lamtor2Q9JHS3 125 aa13.06□□□□□ -0.32
Clcn3-203ENSMUST00000093490 St6galnac6Q9JM95 333 aa13.06□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Olfr322Q5NCC8 327 aa13.06□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Rhno1Q8K3A4 235 aa13.06□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Gm14214V9GX35 225 aa13.06□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Gm21974F6W3F3 119 aa13.06□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Ucp1P12242 307 aa13.06□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Olfr498Q8VEW2 330 aa13.06□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Q91WE4 72 aa13.06□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Ighv1-22A0A075B5U7 117 aa13.06□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Tcrg-V6A0A075B5Y8 134 aa13.06□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Tac4Q99N14 128 aa13.06□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Gm44973A0A140LJJ1 189 aa13.05□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Anapc13Q8R034 74 aa13.05□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Sh3bgrl3Q91VW3 93 aa13.05□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 70.1 ms