RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 NIT2P47016 307 aa3.25□□□□□ -1.89
snR54snR54 MNT2P53059 558 aa3.25□□□□□ -1.89
snR54snR54 YNL092WP53934 400 aa3.25□□□□□ -1.89
snR54snR54 ERG13P54839 491 aaKnown RBP3.25□□□□□ -1.89
snR54snR54 MTD1Q02046 320 aaKnown RBP3.25□□□□□ -1.89
snR54snR54 RTK1Q12100 620 aaPredicted RBP3.25□□□□□ -1.89
snR54snR54 AHA1Q12449 350 aaKnown RBP3.25□□□□□ -1.89
snR54snR54 VPS5Q92331 675 aa3.25□□□□□ -1.89
snR54snR54 YMR085WP0CF18 432 aa3.24□□□□□ -1.89
snR54snR54 SEC12P11655 471 aa3.24□□□□□ -1.89
snR54snR54 CWH43P25618 953 aa3.24□□□□□ -1.89
snR54snR54 STB5P38699 743 aa3.24□□□□□ -1.89
snR54snR54 UBP12P39538 1254 aa3.24□□□□□ -1.89
snR54snR54 SCS3P53012 380 aa3.24□□□□□ -1.89
snR54snR54 SPC105P53148 917 aa3.24□□□□□ -1.89
snR54snR54 CYK3Q07533 885 aa3.24□□□□□ -1.89
snR54snR54 URA3P03962 267 aa3.23□□□□□ -1.89
snR54snR54 COX11P19516 300 aaKnown RBP3.23□□□□□ -1.89
snR54snR54 YAP1P19880 650 aaKnown RBP3.23□□□□□ -1.89
snR54snR54 CDC5P32562 705 aa3.23□□□□□ -1.89
snR54snR54 YEN1P40028 759 aa3.23□□□□□ -1.89
snR54snR54 YPL071CQ02864 156 aa3.23□□□□□ -1.89
snR54snR54 YML119WQ03208 357 aa3.23□□□□□ -1.89
snR54snR54 RAD33Q04231 177 aa3.23□□□□□ -1.89
snR54snR54 SPN1Q06505 410 aaPredicted RBP3.23□□□□□ -1.89
snR54snR54 SDH8P38345 138 aa3.22□□□□□ -1.89
snR54snR54 YJR120WP47157 116 aa3.22□□□□□ -1.89
snR54snR54 COS12P53053 380 aa3.22□□□□□ -1.89
snR54snR54 IDP3P53982 420 aaKnown RBP3.22□□□□□ -1.89
snR54snR54 YPL068CQ02749 293 aa3.22□□□□□ -1.89
snR54snR54 TDA9Q04545 1251 aa3.22□□□□□ -1.89
snR54snR54 HRD3Q05787 833 aa3.22□□□□□ -1.89
snR54snR54 TPO3Q06451 622 aa3.22□□□□□ -1.89
snR54snR54 TRE2Q08693 809 aa3.22□□□□□ -1.89
snR54snR54 CRC1Q12289 327 aa3.22□□□□□ -1.89
snR54snR54 TSR4P25040 408 aa3.21□□□□□ -1.9
snR54snR54 MAD2P40958 196 aa3.21□□□□□ -1.9
snR54snR54 YNR071CP53757 342 aa3.21□□□□□ -1.9
snR54snR54 CRT10Q08226 957 aa3.21□□□□□ -1.9
snR54snR54 AMD2P22580 549 aa3.2□□□□□ -1.9
snR54snR54 HEM12P32347 362 aaPredicted RBP3.2□□□□□ -1.9
snR54snR54 YBR071WP38243 211 aa3.2□□□□□ -1.9
snR54snR54 YIL092WP40497 633 aa3.2□□□□□ -1.9
snR54snR54 SCW4P53334 386 aaKnown RBP3.2□□□□□ -1.9
snR54snR54 DIN7Q12086 430 aa3.2□□□□□ -1.9
snR54snR54 HOS1Q12214 470 aa3.2□□□□□ -1.9
snR54snR54 TMA17Q12513 150 aa3.2□□□□□ -1.9
snR54snR54 PNO1Q99216 274 aaKnown RBP3.2□□□□□ -1.9
snR54snR54 Q0010Q9ZZX9 128 aa3.2□□□□□ -1.9
snR54snR54 BI2P03873 423 aa3.19□□□□□ -1.9
snR54snR54 CBP3P21560 335 aa3.19□□□□□ -1.9
snR54snR54 RRP43P25359 394 aaPredicted RBP3.19□□□□□ -1.9
snR54snR54 PET309P32522 965 aaPredicted RBP3.19□□□□□ -1.9
snR54snR54 ENP1P38333 483 aaKnown RBP3.19□□□□□ -1.9
snR54snR54 IMD2P38697 523 aaKnown RBP3.19□□□□□ -1.9
snR54snR54 MTG2P38860 518 aa3.19□□□□□ -1.9
snR54snR54 STL1P39932 569 aa3.19□□□□□ -1.9
snR54snR54 JHD1P40034 492 aa3.19□□□□□ -1.9
snR54snR54 YIL024CP40543 189 aa3.19□□□□□ -1.9
snR54snR54 MNT3P40549 630 aa3.19□□□□□ -1.9
snR54snR54 IMD3P50095 523 aaKnown RBP3.19□□□□□ -1.9
snR54snR54 SLD3P53135 668 aa3.19□□□□□ -1.9
snR54snR54 UBP16Q02863 499 aa3.19□□□□□ -1.9
snR54snR54 RTC1Q08281 1341 aa3.19□□□□□ -1.9
snR54snR54 GRX4P32642 244 aa3.18□□□□□ -1.9
snR54snR54 TFC4P33339 1025 aa3.18□□□□□ -1.9
snR54snR54 PCI8P40512 444 aa3.18□□□□□ -1.9
snR54snR54 GSM1P42950 618 aa3.18□□□□□ -1.9
snR54snR54 IRC8P47046 822 aa3.18□□□□□ -1.9
snR54snR54 YGL081WP53156 320 aa3.18□□□□□ -1.9
snR54snR54 COG2P53271 262 aa3.18□□□□□ -1.9
snR54snR54 COG6P53959 839 aa3.18□□□□□ -1.9
snR54snR54 DOS2P54858 310 aa3.18□□□□□ -1.9
snR54snR54 PEX15Q08215 383 aa3.18□□□□□ -1.9
snR54snR54 HER1Q12276 1246 aa3.18□□□□□ -1.9
snR54snR54 PRE2P30656 287 aaKnown RBP3.17□□□□□ -1.9
snR54snR54 ASK1P35734 292 aa3.17□□□□□ -1.9
snR54snR54 FTH1P38310 465 aa3.17□□□□□ -1.9
snR54snR54 ARO9P38840 513 aaPredicted RBP3.17□□□□□ -1.9
snR54snR54 VPS8P39702 1274 aa3.17□□□□□ -1.9
snR54snR54 SAP1P39955 897 aaKnown RBP3.17□□□□□ -1.9
snR54snR54 IRC7P43623 340 aa3.17□□□□□ -1.9
snR54snR54 HOL1P53389 586 aa3.17□□□□□ -1.9
snR54snR54 COP1P53622 1201 aaKnown RBP3.17□□□□□ -1.9
snR54snR54 SNU56Q03782 492 aaKnown RBP3.17□□□□□ -1.9
snR54snR54 YML053CQ04978 212 aa3.17□□□□□ -1.9
snR54snR54 DBP10Q12389 995 aaKnown RBP3.17□□□□□ -1.9
snR54snR54 CHO2P05374 869 aaKnown RBP3.16□□□□□ -1.9
snR54snR54 YER190C-BP0CX94 160 aa3.16□□□□□ -1.9
snR54snR54 YEL077W-AP0CX95 160 aa3.16□□□□□ -1.9
snR54snR54 YGR296C-BP0CX96 160 aa3.16□□□□□ -1.9
snR54snR54 YPL283W-BP0CX97 160 aa3.16□□□□□ -1.9
snR54snR54 YPR204C-AP0CX98 160 aa3.16□□□□□ -1.9
snR54snR54 KAR1P11927 433 aa3.16□□□□□ -1.9
snR54snR54 FLO5P38894 1075 aa3.16□□□□□ -1.9
snR54snR54 IDS2P46958 469 aa3.16□□□□□ -1.9
snR54snR54 YDL242WQ07746 117 aa3.16□□□□□ -1.9
snR54snR54 LCB4Q12246 624 aa3.16□□□□□ -1.9
snR54snR54 YPR089WO13585 888 aa3.15□□□□□ -1.91
snR54snR54 MAK32P23060 363 aa3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms