RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 SCT1P32784 759 aa-0.22□□□□□ -2.44
snR53snR53 RIM2P38127 377 aa-0.22□□□□□ -2.44
snR53snR53 ATG27P46989 271 aa-0.22□□□□□ -2.44
snR53snR53 SET2P46995 733 aaKnown RBP-0.22□□□□□ -2.44
snR53snR53 POL32P47110 350 aa-0.22□□□□□ -2.44
snR53snR53 VPS25P47142 202 aa-0.22□□□□□ -2.44
snR53snR53 NPY1P53164 384 aa-0.22□□□□□ -2.44
snR53snR53 YGR054WP53235 642 aaKnown RBP-0.22□□□□□ -2.44
snR53snR53 MHR1Q06630 226 aa-0.22□□□□□ -2.44
snR53snR53 YPS3Q12303 508 aa-0.22□□□□□ -2.44
snR53snR53 GAL11P19659 1081 aa-0.23□□□□□ -2.45
snR53snR53 TRS65P32893 560 aa-0.23□□□□□ -2.45
snR53snR53 YJL107CP42947 387 aa-0.23□□□□□ -2.45
snR53snR53 ARA2Q04212 335 aa-0.23□□□□□ -2.45
snR53snR53 ATE1P16639 503 aa-0.24□□□□□ -2.45
snR53snR53 GLN3P18494 730 aa-0.24□□□□□ -2.45
snR53snR53 YKL097CP34245 136 aa-0.24□□□□□ -2.45
snR53snR53 CCL1P37366 393 aa-0.24□□□□□ -2.45
snR53snR53 TIM50Q02776 476 aa-0.24□□□□□ -2.45
snR53snR53 OPI10Q08202 246 aa-0.24□□□□□ -2.45
snR53snR53 PCK1P10963 549 aa-0.25□□□□□ -2.45
snR53snR53 YPT7P32939 208 aa-0.25□□□□□ -2.45
snR53snR53 YKR051WP36142 418 aa-0.25□□□□□ -2.45
snR53snR53 STB5P38699 743 aa-0.25□□□□□ -2.45
snR53snR53 UBP6P43593 499 aaKnown RBP-0.25□□□□□ -2.45
snR53snR53 PFD1P46988 109 aa-0.25□□□□□ -2.45
snR53snR53 PCL10P53124 433 aa-0.25□□□□□ -2.45
snR53snR53 ARP4P80428 489 aa-0.25□□□□□ -2.45
snR53snR53 ATP25Q03153 612 aa-0.25□□□□□ -2.45
snR53snR53 RAD33Q04231 177 aa-0.25□□□□□ -2.45
snR53snR53 VBA4Q04602 768 aaKnown RBP-0.25□□□□□ -2.45
snR53snR53 ARP9Q05123 467 aa-0.25□□□□□ -2.45
snR53snR53 SVF1Q05515 481 aa-0.25□□□□□ -2.45
snR53snR53 UBX5Q06682 500 aa-0.25□□□□□ -2.45
snR53snR53 RTC1Q08281 1341 aa-0.25□□□□□ -2.45
snR53snR53 AAC1P04710 309 aa-0.26□□□□□ -2.45
snR53snR53 STE5P32917 917 aa-0.26□□□□□ -2.45
snR53snR53 MDM31P38880 579 aa-0.26□□□□□ -2.45
snR53snR53 ERV46P39727 415 aa-0.26□□□□□ -2.45
snR53snR53 YLR152CP54072 576 aa-0.26□□□□□ -2.45
snR53snR53 ACS1Q01574 713 aa-0.26□□□□□ -2.45
snR53snR53 RFM1Q12192 310 aa-0.26□□□□□ -2.45
snR53snR53 FRS1P15624 595 aaKnown RBP-0.27□□□□□ -2.45
snR53snR53 HOP1P20050 605 aa-0.27□□□□□ -2.45
snR53snR53 ATS1P31386 333 aa-0.27□□□□□ -2.45
snR53snR53 RPN2P32565 945 aaKnown RBP-0.27□□□□□ -2.45
snR53snR53 DHR2P36009 735 aaPredicted RBP-0.27□□□□□ -2.45
snR53snR53 PBP2P38151 413 aaKnown RBP RIP-Chip data-0.27□□□□□ -2.45not detected
snR53snR53 CIR1P42940 261 aa-0.27□□□□□ -2.45
snR53snR53 VHS3Q08438 674 aa-0.27□□□□□ -2.45
snR53snR53 LYS21Q12122 440 aaKnown RBP-0.27□□□□□ -2.45
snR53snR53 YPK1P12688 680 aaKnown RBP-0.28□□□□□ -2.45
snR53snR53 CAP1P28495 268 aaKnown RBP-0.28□□□□□ -2.45
snR53snR53 SPR1P32603 445 aa-0.28□□□□□ -2.45
snR53snR53 RTS1P38903 757 aa-0.28□□□□□ -2.45
snR53snR53 YJL132WP47014 750 aa-0.28□□□□□ -2.45
snR53snR53 BRE5P53741 515 aaKnown RBP-0.28□□□□□ -2.45
snR53snR53 SMA1Q02651 245 aa-0.28□□□□□ -2.45
snR53snR53 ECI1Q05871 280 aa-0.28□□□□□ -2.45
snR53snR53 GDH1P07262 454 aaKnown RBP-0.29□□□□□ -2.46
snR53snR53 YCR061WP25639 631 aa-0.29□□□□□ -2.46
snR53snR53 AGA1P32323 725 aa-0.29□□□□□ -2.46
snR53snR53 GDA1P32621 518 aa-0.29□□□□□ -2.46
snR53snR53 YKR018CP36114 725 aa-0.29□□□□□ -2.46
snR53snR53 ARN1P38731 627 aa-0.29□□□□□ -2.46
snR53snR53 ALG2P43636 503 aa-0.29□□□□□ -2.46
snR53snR53 ORC5P50874 479 aa-0.29□□□□□ -2.46
snR53snR53 HST1P53685 503 aa-0.29□□□□□ -2.46
snR53snR53 FDC1Q03034 503 aa-0.29□□□□□ -2.46
snR53snR53 USA1Q03714 838 aa-0.29□□□□□ -2.46
snR53snR53 PRP22P24384 1145 aaKnown RBP-0.3□□□□□ -2.46
snR53snR53 NAP1P25293 417 aaKnown RBP-0.3□□□□□ -2.46
snR53snR53 MGR1P25573 417 aa-0.3□□□□□ -2.46
snR53snR53 PET127P32606 800 aa-0.3□□□□□ -2.46
snR53snR53 YEL025CP39991 1188 aa-0.3□□□□□ -2.46
snR53snR53 YGL036WP53185 909 aaPredicted RBP-0.3□□□□□ -2.46
snR53snR53 UTP8P53276 713 aaKnown RBP-0.3□□□□□ -2.46
snR53snR53 RAD34Q06665 692 aa-0.3□□□□□ -2.46
snR53snR53 OSH2Q12451 1283 aa-0.3□□□□□ -2.46
snR53snR53 GLN4P13188 809 aaKnown RBP-0.31□□□□□ -2.46
snR53snR53 YHR202WP38887 602 aa-0.31□□□□□ -2.46
snR53snR53 ASK10P48361 1146 aa-0.31□□□□□ -2.46
snR53snR53 MTD1Q02046 320 aaKnown RBP-0.31□□□□□ -2.46
snR53snR53 RCR2Q03446 210 aaKnown RBP-0.31□□□□□ -2.46
snR53snR53 HEL2Q05580 639 aaKnown RBP-0.31□□□□□ -2.46
snR53snR53 BSC1Q12140 328 aa-0.31□□□□□ -2.46
snR53snR53 SFP1P32432 683 aa-0.32□□□□□ -2.46
snR53snR53 YBP1P38315 674 aa-0.32□□□□□ -2.46
snR53snR53 RPN10P38886 268 aaKnown RBP-0.32□□□□□ -2.46
snR53snR53 CRG1P38892 291 aaRIP-Chip data-0.32□□□□□ -2.46not detected
snR53snR53 IML2P47031 731 aa-0.32□□□□□ -2.46
snR53snR53 YDR415CQ04033 374 aaPredicted RBP-0.32□□□□□ -2.46
snR53snR53 POS5Q06892 414 aa-0.32□□□□□ -2.46
snR53snR53 PSR2Q07949 397 aa-0.32□□□□□ -2.46
snR53snR53 CCH1P50077 2039 aa-0.32□□□□□ -2.46
snR53snR53 SAL1D6W196 494 aa-0.33□□□□□ -2.46
snR53snR53 CBP1P07252 654 aa-0.33□□□□□ -2.46
snR53snR53 POL3P15436 1097 aa-0.33□□□□□ -2.46
snR53snR53 NOP2P40991 618 aaKnown RBP-0.33□□□□□ -2.46
snR53snR53 YDL186WP48568 277 aa-0.33□□□□□ -2.46
Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms