RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 ATG33Q06485 197 aa1.28□□□□□ -2.2
snR48snR48 CYK3Q07533 885 aa1.28□□□□□ -2.2
snR48snR48 YOR389WQ08912 624 aa1.28□□□□□ -2.2
snR48snR48 GIN4Q12263 1142 aa1.28□□□□□ -2.2
snR48snR48 MDM12Q92328 271 aa1.28□□□□□ -2.2
snR48snR48 PNO1Q99216 274 aaKnown RBP1.28□□□□□ -2.2
snR48snR48 ILS1P09436 1072 aaKnown RBP1.27□□□□□ -2.21
snR48snR48 YPK1P12688 680 aaKnown RBP1.27□□□□□ -2.21
snR48snR48 YJU2P28320 278 aaPredicted RBP1.27□□□□□ -2.21
snR48snR48 YPT10P38146 199 aa1.27□□□□□ -2.21
snR48snR48 MAL31P38156 614 aa1.27□□□□□ -2.21
snR48snR48 IMD2P38697 523 aaKnown RBP1.27□□□□□ -2.21
snR48snR48 BEM4P39011 633 aa1.27□□□□□ -2.21
snR48snR48 YJL049WP47048 450 aa1.27□□□□□ -2.21
snR48snR48 IMD3P50095 523 aaKnown RBP1.27□□□□□ -2.21
snR48snR48 PPN1Q04119 674 aa1.27□□□□□ -2.21
snR48snR48 MRN1Q08925 612 aaKnown RBP RIP-Chip data1.27□□□□□ -2.21not detected
snR48snR48 HOP1P20050 605 aa1.26□□□□□ -2.21
snR48snR48 IME1P21190 360 aa1.26□□□□□ -2.21
snR48snR48 MEF1P25039 761 aa1.26□□□□□ -2.21
snR48snR48 PRE4P30657 266 aa1.26□□□□□ -2.21
snR48snR48 EHT1P38295 451 aa1.26□□□□□ -2.21
snR48snR48 SNU71P53207 620 aaKnown RBP1.26□□□□□ -2.21
snR48snR48 ECM22Q05958 814 aaPredicted RBP1.26□□□□□ -2.21
snR48snR48 PFA4Q12006 378 aa1.26□□□□□ -2.21
snR48snR48 CDC53Q12018 815 aaKnown RBP1.26□□□□□ -2.21
snR48snR48 YER175W-AQ8TGU4 54 aa1.26□□□□□ -2.21
snR48snR48 SEC18P18759 758 aaKnown RBP1.25□□□□□ -2.21
snR48snR48 FTH1P38310 465 aa1.25□□□□□ -2.21
snR48snR48 CIN1P40987 1014 aa1.25□□□□□ -2.21
snR48snR48 YPT11P48559 417 aa1.25□□□□□ -2.21
snR48snR48 YNL144CP53907 740 aa1.25□□□□□ -2.21
snR48snR48 AIM41Q12032 185 aa1.25□□□□□ -2.21
snR48snR48 YBR298C-AQ8TGK4 73 aa1.25□□□□□ -2.21
snR48snR48 CBS2P14905 389 aa1.24□□□□□ -2.21
snR48snR48 SFL1P20134 766 aa1.24□□□□□ -2.21
snR48snR48 CDS1P38221 457 aa1.24□□□□□ -2.21
snR48snR48 PCM1P38628 557 aaKnown RBP1.24□□□□□ -2.21
snR48snR48 MTC6P38849 526 aa1.24□□□□□ -2.21
snR48snR48 KRE9P39005 276 aa1.24□□□□□ -2.21
snR48snR48 CHZ1P40019 153 aaPredicted RBP1.24□□□□□ -2.21
snR48snR48 TAF4P50105 388 aa1.24□□□□□ -2.21
snR48snR48 IGO1P53897 168 aa1.24□□□□□ -2.21
snR48snR48 YNL058CP53947 316 aa1.24□□□□□ -2.21
snR48snR48 GPN2Q08726 347 aaPredicted RBP1.24□□□□□ -2.21
snR48snR48 RPS17AP02407 136 aaKnown RBP1.23□□□□□ -2.21
snR48snR48 AAC1P04710 309 aa1.23□□□□□ -2.21
snR48snR48 RPS17BP14127 136 aaKnown RBP1.23□□□□□ -2.21
snR48snR48 BET2P20133 325 aa1.23□□□□□ -2.21
snR48snR48 MAK32P23060 363 aa1.23□□□□□ -2.21
snR48snR48 PCL2P25693 308 aa1.23□□□□□ -2.21
snR48snR48 YHR033WP38690 423 aa1.23□□□□□ -2.21
snR48snR48 RAD26P40352 1085 aa1.23□□□□□ -2.21
snR48snR48 PRM2P40534 656 aa1.23□□□□□ -2.21
snR48snR48 USA1Q03714 838 aa1.23□□□□□ -2.21
snR48snR48 RAD33Q04231 177 aa1.23□□□□□ -2.21
snR48snR48 HLR1Q04429 423 aa1.23□□□□□ -2.21
snR48snR48 FMP42Q04991 504 aa1.23□□□□□ -2.21
snR48snR48 RRI1Q12468 440 aa1.23□□□□□ -2.21
snR48snR48 YOR131CQ12486 218 aa1.23□□□□□ -2.21
snR48snR48 RTC1Q08281 1341 aa1.22□□□□□ -2.21
snR48snR48 GDA1P32621 518 aa1.22□□□□□ -2.21
snR48snR48 BZZ1P38822 633 aa1.22□□□□□ -2.21
snR48snR48 YHR218WP38899 603 aa1.22□□□□□ -2.21
snR48snR48 LRO1P40345 661 aa1.22□□□□□ -2.21
snR48snR48 NOP15P53927 220 aaPredicted RBP1.22□□□□□ -2.21
snR48snR48 COG8Q04632 607 aa1.22□□□□□ -2.21
snR48snR48 ARR3Q06598 404 aa1.22□□□□□ -2.21
snR48snR48 YCG1Q06680 1035 aa1.22□□□□□ -2.21
snR48snR48 GSH2Q08220 491 aa1.22□□□□□ -2.21
snR48snR48 CRT10Q08226 957 aa1.22□□□□□ -2.21
snR48snR48 GET3Q12154 354 aaKnown RBP1.22□□□□□ -2.21
snR48snR48 PCK1P10963 549 aa1.21□□□□□ -2.22
snR48snR48 SEC1P30619 724 aaKnown RBP1.21□□□□□ -2.22
snR48snR48 HXT1P32465 570 aa1.21□□□□□ -2.22
snR48snR48 TIM23P32897 222 aa1.21□□□□□ -2.22
snR48snR48 YJL193WP39542 402 aa1.21□□□□□ -2.22
snR48snR48 CIR1P42940 261 aa1.21□□□□□ -2.22
snR48snR48 YML002WP0CF17 737 aa1.2□□□□□ -2.22
snR48snR48 STI1P15705 589 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
snR48snR48 VPS33P20795 691 aa1.2□□□□□ -2.22
snR48snR48 CNA1P23287 553 aa1.2□□□□□ -2.22
snR48snR48 SFP1P32432 683 aa1.2□□□□□ -2.22
snR48snR48 NIC96P34077 839 aa1.2□□□□□ -2.22
snR48snR48 TDA3P38758 523 aa1.2□□□□□ -2.22
snR48snR48 SPG5P42933 373 aa1.2□□□□□ -2.22
snR48snR48 CUL3P53202 744 aa1.2□□□□□ -2.22
snR48snR48 COG2P53271 262 aa1.2□□□□□ -2.22
snR48snR48 MTD1Q02046 320 aaKnown RBP1.2□□□□□ -2.22
snR48snR48 NSE5Q03718 556 aa1.2□□□□□ -2.22
snR48snR48 GUD1Q07729 489 aa1.2□□□□□ -2.22
snR48snR48 SWI6P09959 803 aa1.19□□□□□ -2.22
snR48snR48 GLN4P13188 809 aaKnown RBP1.19□□□□□ -2.22
snR48snR48 GSH1P32477 678 aa1.19□□□□□ -2.22
snR48snR48 PAM1P37304 830 aaKnown RBP1.19□□□□□ -2.22
snR48snR48 YJL070CP40361 888 aa1.19□□□□□ -2.22
snR48snR48 NSE3Q05541 303 aa1.19□□□□□ -2.22
snR48snR48 RRP43P25359 394 aaPredicted RBP1.18□□□□□ -2.22
snR48snR48 DSS4P32601 143 aa1.18□□□□□ -2.22
snR48snR48 SAP1P39955 897 aaKnown RBP1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms