RNA–Protein interactions for RNA: YPR065W

ROX1, Transcript of Heme-dependent repressor of hypoxic genes, yeastyeast

Gene ROX1, Length 1,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROX1YPR065W HER1Q12276 1246 aa2.79□□□□□ -1.96
ROX1YPR065W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
ROX1YPR065W CNE1P27825 502 aa2.78□□□□□ -1.96
ROX1YPR065W SER1P33330 395 aaKnown RBP2.78□□□□□ -1.96
ROX1YPR065W ARC40P38328 384 aaKnown RBP2.78□□□□□ -1.96
ROX1YPR065W YHR033WP38690 423 aa2.78□□□□□ -1.96
ROX1YPR065W BUD8P41698 603 aa2.78□□□□□ -1.96
ROX1YPR065W BST1P43571 1029 aa2.78□□□□□ -1.96
ROX1YPR065W PEX8P53248 589 aa2.78□□□□□ -1.96
ROX1YPR065W RTS3P53289 263 aa2.78□□□□□ -1.96
ROX1YPR065W HOL1P53389 586 aa2.78□□□□□ -1.96
ROX1YPR065W YNL018CP53976 612 aa2.78□□□□□ -1.96
ROX1YPR065W EFR3Q03653 782 aaKnown RBP2.78□□□□□ -1.96
ROX1YPR065W ECM38Q05902 660 aaPredicted RBP2.78□□□□□ -1.96
ROX1YPR065W MPD2Q99316 277 aa2.78□□□□□ -1.96
ROX1YPR065W AQY1P0CD91 305 aa2.77□□□□□ -1.97
ROX1YPR065W IME1P21190 360 aa2.77□□□□□ -1.97
ROX1YPR065W HEM12P32347 362 aaPredicted RBP2.77□□□□□ -1.97
ROX1YPR065W NIC96P34077 839 aa2.77□□□□□ -1.97
ROX1YPR065W YOX1P34161 385 aa2.77□□□□□ -1.97
ROX1YPR065W DHR2P36009 735 aaPredicted RBP2.77□□□□□ -1.97
ROX1YPR065W ENP1P38333 483 aaKnown RBP2.77□□□□□ -1.97
ROX1YPR065W CFD1P40558 293 aa2.77□□□□□ -1.97
ROX1YPR065W NOP2P40991 618 aaKnown RBP2.77□□□□□ -1.97
ROX1YPR065W YJL043WP47053 257 aa2.77□□□□□ -1.97
ROX1YPR065W TAF4P50105 388 aa2.77□□□□□ -1.97
ROX1YPR065W BUD17P53727 317 aa2.77□□□□□ -1.97
ROX1YPR065W SQS1P53866 767 aaKnown RBP2.77□□□□□ -1.97
ROX1YPR065W YNL034WP53963 612 aa2.77□□□□□ -1.97
ROX1YPR065W HLR1Q04429 423 aa2.77□□□□□ -1.97
ROX1YPR065W NGL1Q08213 363 aaKnown RBP2.77□□□□□ -1.97
ROX1YPR065W CWC2Q12046 339 aaPredicted RBP2.77□□□□□ -1.97
ROX1YPR065W TGS1Q12052 315 aa2.77□□□□□ -1.97
ROX1YPR065W YER190C-BP0CX94 160 aa2.76□□□□□ -1.97
ROX1YPR065W YEL077W-AP0CX95 160 aa2.76□□□□□ -1.97
ROX1YPR065W YGR296C-BP0CX96 160 aa2.76□□□□□ -1.97
ROX1YPR065W YPL283W-BP0CX97 160 aa2.76□□□□□ -1.97
ROX1YPR065W YPR204C-AP0CX98 160 aa2.76□□□□□ -1.97
ROX1YPR065W ATP12P22135 325 aa2.76□□□□□ -1.97
ROX1YPR065W GSY2P27472 705 aa2.76□□□□□ -1.97
ROX1YPR065W HXT4P32467 576 aa2.76□□□□□ -1.97
ROX1YPR065W LOT5P34234 306 aa2.76□□□□□ -1.97
ROX1YPR065W MRPL7P36519 292 aa2.76□□□□□ -1.97
ROX1YPR065W SRP68P38687 599 aaKnown RBP2.76□□□□□ -1.97
ROX1YPR065W EXO1P39875 702 aa2.76□□□□□ -1.97
ROX1YPR065W OPT1P40897 799 aa2.76□□□□□ -1.97
ROX1YPR065W IES1P43579 692 aa2.76□□□□□ -1.97
ROX1YPR065W YGL260WP53056 76 aa2.76□□□□□ -1.97
ROX1YPR065W YGR054WP53235 642 aaKnown RBP2.76□□□□□ -1.97
ROX1YPR065W MDR1P53258 950 aa2.76□□□□□ -1.97
ROX1YPR065W STP4Q07351 490 aa2.76□□□□□ -1.97
ROX1YPR065W YEL076C-AP0CX16 216 aa2.75□□□□□ -1.97
ROX1YPR065W YLR464WP0CX17 216 aa2.75□□□□□ -1.97
ROX1YPR065W CDC26P14724 124 aa2.75□□□□□ -1.97
ROX1YPR065W CAP1P28495 268 aaKnown RBP2.75□□□□□ -1.97
ROX1YPR065W PRE4P30657 266 aa2.75□□□□□ -1.97
ROX1YPR065W YKL133CP36066 463 aa2.75□□□□□ -1.97
ROX1YPR065W CRG1P38892 291 aaRIP-Chip data2.75□□□□□ -1.97not detected
ROX1YPR065W SAW1P39735 261 aa2.75□□□□□ -1.97
ROX1YPR065W YEL076CP39971 216 aa2.75□□□□□ -1.97
ROX1YPR065W YEL025CP39991 1188 aa2.75□□□□□ -1.97
ROX1YPR065W NSE5Q03718 556 aa2.75□□□□□ -1.97
ROX1YPR065W SNA4Q07549 140 aa2.75□□□□□ -1.97
ROX1YPR065W NUR1Q12066 484 aa2.75□□□□□ -1.97
ROX1YPR065W SST2P11972 698 aaKnown RBP2.74□□□□□ -1.97
ROX1YPR065W ACO1P19414 778 aaKnown RBP RIP-Chip data2.74□□□□□ -1.97not detected
ROX1YPR065W MF(ALPHA)2P32435 120 aa2.74□□□□□ -1.97
ROX1YPR065W FLO5P38894 1075 aa2.74□□□□□ -1.97
ROX1YPR065W STL1P39932 569 aa2.74□□□□□ -1.97
ROX1YPR065W FTR1P40088 404 aa2.74□□□□□ -1.97
ROX1YPR065W AIM41Q12032 185 aa2.74□□□□□ -1.97
ROX1YPR065W RDL1Q12305 139 aaKnown RBP2.74□□□□□ -1.97
ROX1YPR065W ATP4P05626 244 aa2.73□□□□□ -1.97
ROX1YPR065W HOP1P20050 605 aa2.73□□□□□ -1.97
ROX1YPR065W PHO3P24031 467 aa2.73□□□□□ -1.97
ROX1YPR065W EAF5P39995 279 aa2.73□□□□□ -1.97
ROX1YPR065W TPM2P40414 161 aa2.73□□□□□ -1.97
ROX1YPR065W YIL092WP40497 633 aa2.73□□□□□ -1.97
ROX1YPR065W YIL024CP40543 189 aa2.73□□□□□ -1.97
ROX1YPR065W YFL015CP43578 164 aa2.73□□□□□ -1.97
ROX1YPR065W TGL2P54857 326 aa2.73□□□□□ -1.97
ROX1YPR065W MTD1Q02046 320 aaKnown RBP2.73□□□□□ -1.97
ROX1YPR065W PSF3Q12146 194 aa2.73□□□□□ -1.97
ROX1YPR065W HOS1Q12214 470 aa2.73□□□□□ -1.97
ROX1YPR065W SEC12P11655 471 aa2.72□□□□□ -1.97
ROX1YPR065W RNR3P21672 869 aaKnown RBP2.72□□□□□ -1.97
ROX1YPR065W YCP4P25349 247 aaKnown RBP2.72□□□□□ -1.97
ROX1YPR065W PTP2P29461 750 aa2.72□□□□□ -1.97
ROX1YPR065W SDS22P36047 338 aa2.72□□□□□ -1.97
ROX1YPR065W CCL1P37366 393 aa2.72□□□□□ -1.97
ROX1YPR065W YBR139WP38109 508 aa2.72□□□□□ -1.97
ROX1YPR065W TAF5P38129 798 aa2.72□□□□□ -1.97
ROX1YPR065W MTG2P38860 518 aa2.72□□□□□ -1.97
ROX1YPR065W PRM2P40534 656 aa2.72□□□□□ -1.97
ROX1YPR065W SKP2P42843 763 aa2.72□□□□□ -1.97
ROX1YPR065W IRC5P43610 853 aa2.72□□□□□ -1.97
ROX1YPR065W ASK10P48361 1146 aa2.72□□□□□ -1.97
ROX1YPR065W SAP4P53036 818 aa2.72□□□□□ -1.97
ROX1YPR065W BOP3P53958 396 aa2.72□□□□□ -1.97
ROX1YPR065W RPS15Q01855 142 aaKnown RBP2.72□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 91.1 ms